RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 SNAP91O60641 907 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 MAGEC1O60732 1142 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 UBOX5O94941 541 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 PCCBP05166 539 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 CYBAP13498 195 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 IDSP22304 550 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 KCNA5P22460 613 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 CSKP41240 450 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 MSLNQ13421 630 aaPredicted RBP9.26□□□□□ -0.93
GGA3-223ENST00000621870 SLC39A5Q6ZMH5 540 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 CHST15Q7LFX5 561 aaPredicted RBP9.26□□□□□ -0.93
GGA3-223ENST00000621870 MMAAQ8IVH4 418 aaKnown RBP9.26□□□□□ -0.93
GGA3-223ENST00000621870 PRCCQ92733 491 aaPredicted RBP9.26□□□□□ -0.93
GGA3-223ENST00000621870 SIPA1Q96FS4 1042 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 ZBED3Q96IU2 234 aaPredicted RBP9.26□□□□□ -0.93
GGA3-223ENST00000621870 DNAJC1Q96KC8 554 aaKnown RBP9.26□□□□□ -0.93
GGA3-223ENST00000621870 PAAF1Q9BRP4 392 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 TBCDQ9BTW9 1192 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 OSBPL1AQ9BXW6 950 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 TTYH3Q9C0H2 523 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 SNX15Q9NRS6 342 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 PRKCGP05129 697 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 TLX1P31314 330 aaPredicted RBP9.26□□□□□ -0.93
GGA3-223ENST00000621870 SPAM1P38567 509 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 GUCA1AP43080 201 aaPredicted RBP9.26□□□□□ -0.93
GGA3-223ENST00000621870 MAP3K10Q02779 954 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 VAC14Q08AM6 782 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 MED21Q13503 144 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 SPIDRQ14159 915 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 TEAD2Q15562 447 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 FBXO48Q5FWF7 155 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 MBLAC2Q68D91 279 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 PACS1Q6VY07 963 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 TMEM110Q86TL2 294 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 TMEM139Q8IV31 216 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 CFAP206Q8IYR0 622 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 ZNF655Q8N720 491 aaPredicted RBP9.26□□□□□ -0.93
GGA3-223ENST00000621870 DCBLD1Q8N8Z6 715 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 CATSPER1Q8NEC5 780 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 ACDQ96AP0 544 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 SMAD5Q99717 465 aaKnown RBP9.26□□□□□ -0.93
GGA3-223ENST00000621870 SMOQ99835 787 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 RHOJQ9H4E5 214 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 GDAP2Q9NXN4 497 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 SCHIP1Q9P0W5 487 aaPredicted RBP9.26□□□□□ -0.93
GGA3-223ENST00000621870 RABGEF1Q9UJ41 708 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 PSMD13Q9UNM6 376 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 BTRCQ9Y297 605 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 ZNF142P52746 1687 aaPredicted RBP9.26□□□□□ -0.93
GGA3-223ENST00000621870 MRASO14807 208 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 GUCY1B2O75343 617 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 ALBP02768 609 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 COX7A2P14406 83 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 ATP6V1B2P21281 511 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 RFC2P35250 354 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 PRKAA2P54646 552 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 TOMM20Q15388 145 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 LY6G5CQ5SRR4 150 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 ESRP1Q6NXG1 681 aaKnown RBP9.26□□□□□ -0.93
GGA3-223ENST00000621870 RNF19BQ6ZMZ0 732 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 ZNF662Q6ZS27 426 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 UBE2R2Q712K3 238 aaPredicted RBP9.26□□□□□ -0.93
GGA3-223ENST00000621870 PIWIL4Q7Z3Z4 852 aaKnown RBP9.26□□□□□ -0.93
GGA3-223ENST00000621870 SNX32Q86XE0 403 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 HDDC3Q8N4P3 179 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 CYB5D2Q8WUJ1 264 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 UBE2E3Q969T4 207 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 QRFPRQ96P65 431 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 SLC4A5Q9BY07 1137 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 ATG10Q9H0Y0 220 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 EBF3Q9H4W6 596 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 RPS6KB2Q9UBS0 482 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 NR2E1Q9Y466 385 aa9.26□□□□□ -0.93
GGA3-223ENST00000621870 ARIH1Q9Y4X5 557 aaPredicted RBP9.26□□□□□ -0.93
GGA3-223ENST00000621870 RGPD2P0DJD1 1756 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 DDX3YO15523 660 aaKnown RBP9.25□□□□□ -0.93
GGA3-223ENST00000621870 ZNF623O75123 536 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 RPP40O75818 363 aaKnown RBP9.25□□□□□ -0.93
GGA3-223ENST00000621870 AP2A1O95782 977 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 ITPKAP23677 461 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 HOXD13P35453 343 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 MLLT6P55198 1093 aaPredicted RBP9.25□□□□□ -0.93
GGA3-223ENST00000621870 SH3BGRP55822 239 aaPredicted RBP9.25□□□□□ -0.93
GGA3-223ENST00000621870 CYP4F2P78329 520 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 IL10RBQ08334 325 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 AP5B1Q2VPB7 878 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 APTXQ7Z2E3 356 aaKnown RBP9.25□□□□□ -0.93
GGA3-223ENST00000621870 LEMD2Q8NC56 503 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 PIWIL2Q8TC59 973 aaKnown RBP9.25□□□□□ -0.93
GGA3-223ENST00000621870 CPT1BQ92523 772 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 FIG4Q92562 907 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 RERGQ96A58 199 aaPredicted RBP9.25□□□□□ -0.93
GGA3-223ENST00000621870 TRIM4Q9C037 500 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 SDCBP2Q9H190 292 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 RERGLQ9H628 205 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 CRTAC1Q9NQ79 661 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 VTI1BQ9UEU0 232 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 PRKAG3Q9UGI9 489 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 SNX6Q9UNH7 406 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 TLR6Q9Y2C9 796 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms