RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 EDF1O60869 148 aaKnown RBP21.5■■□□□ 1.03
SPAST-204ENST00000621856 GSRP00390 522 aa21.5■■□□□ 1.03
SPAST-204ENST00000621856 STMN1P16949 149 aa21.5■■□□□ 1.03
SPAST-204ENST00000621856 RPL26P61254 145 aaKnown RBP21.5■■□□□ 1.03
SPAST-204ENST00000621856 PTPRRQ15256 657 aa21.5■■□□□ 1.03
SPAST-204ENST00000621856 ZNF789Q5FWF6 425 aa21.5■■□□□ 1.03
SPAST-204ENST00000621856 TCEAL5Q5H9L2 206 aa21.5■■□□□ 1.03
SPAST-204ENST00000621856 AFTPHQ6ULP2 937 aa21.5■■□□□ 1.03
SPAST-204ENST00000621856 SPATA21Q7Z572 469 aa21.5■■□□□ 1.03
SPAST-204ENST00000621856 SPATS2Q86XZ4 545 aaKnown RBP21.5■■□□□ 1.03
SPAST-204ENST00000621856 MFSD6LQ8IWD5 586 aa21.5■■□□□ 1.03
SPAST-204ENST00000621856 PCDH20Q8N6Y1 951 aaKnown RBP21.5■■□□□ 1.03
SPAST-204ENST00000621856 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.5■■□□□ 1.03
SPAST-204ENST00000621856 ANKS4BQ8N8V4 417 aa21.5■■□□□ 1.03
SPAST-204ENST00000621856 GPR150Q8NGU9 434 aa21.5■■□□□ 1.03
SPAST-204ENST00000621856 NSUN3Q9H649 340 aaKnown RBP21.5■■□□□ 1.03
SPAST-204ENST00000621856 POLR3BQ9NW08 1133 aaPredicted RBP21.5■■□□□ 1.03
SPAST-204ENST00000621856 TMEM216Q9P0N5 145 aa21.5■■□□□ 1.03
SPAST-204ENST00000621856 CDH22Q9UJ99 828 aa21.5■■□□□ 1.03
SPAST-204ENST00000621856 RPL26L1Q9UNX3 145 aaKnown RBP21.5■■□□□ 1.03
SPAST-204ENST00000621856 ZNF711Q9Y462 761 aa21.5■■□□□ 1.03
SPAST-204ENST00000621856 TRIM24O15164 1050 aa21.49■■□□□ 1.03
SPAST-204ENST00000621856 BIRC5O15392 142 aa21.49■■□□□ 1.03
SPAST-204ENST00000621856 STX7O15400 261 aaKnown RBP21.49■■□□□ 1.03
SPAST-204ENST00000621856 LINC01565O15544 149 aa21.49■■□□□ 1.03
SPAST-204ENST00000621856 HTRA2O43464 458 aaPredicted RBP21.49■■□□□ 1.03
SPAST-204ENST00000621856 PROCP04070 461 aa21.49■■□□□ 1.03
SPAST-204ENST00000621856 BPGMP07738 259 aa21.49■■□□□ 1.03
SPAST-204ENST00000621856 RAB10P61026 200 aa21.49■■□□□ 1.03
SPAST-204ENST00000621856 POU4F1Q01851 419 aa21.49■■□□□ 1.03
SPAST-204ENST00000621856 HYAL1Q12794 435 aa21.49■■□□□ 1.03
SPAST-204ENST00000621856 MYLK3Q32MK0 819 aa21.49■■□□□ 1.03
SPAST-204ENST00000621856 CCDC153Q494R4 210 aa21.49■■□□□ 1.03
SPAST-204ENST00000621856 KIAA0907Q7Z7F0 614 aaPredicted RBP21.49■■□□□ 1.03
SPAST-204ENST00000621856 SDCCAG8Q86SQ7 713 aaPredicted RBP21.49■■□□□ 1.03
SPAST-204ENST00000621856 PLD6Q8N2A8 252 aaKnown RBP21.49■■□□□ 1.03
SPAST-204ENST00000621856 TTC30BQ8N4P2 665 aa21.49■■□□□ 1.03
SPAST-204ENST00000621856 PIH1D2Q8WWB5 315 aa21.49■■□□□ 1.03
SPAST-204ENST00000621856 GPR63Q9BZJ6 419 aa21.49■■□□□ 1.03
SPAST-204ENST00000621856 ZNF358Q9NW07 568 aa21.49■■□□□ 1.03
SPAST-204ENST00000621856 TRAFD1O14545 582 aaPredicted RBP21.49■■□□□ 1.03
SPAST-204ENST00000621856 S1PR4O95977 384 aa21.49■■□□□ 1.03
SPAST-204ENST00000621856 CRABP2P29373 138 aa21.49■■□□□ 1.03
SPAST-204ENST00000621856 DGKGP49619 791 aa21.49■■□□□ 1.03
SPAST-204ENST00000621856 FASTKD1Q53R41 847 aaKnown RBP21.49■■□□□ 1.03
SPAST-204ENST00000621856 CARD16Q5EG05 197 aa21.49■■□□□ 1.03
SPAST-204ENST00000621856 RBM20Q5T481 1227 aaKnown RBP21.49■■□□□ 1.03
SPAST-204ENST00000621856 ANKRD54Q6NXT1 300 aa21.49■■□□□ 1.03
SPAST-204ENST00000621856 CLEC14AQ86T13 490 aa21.49■■□□□ 1.03
SPAST-204ENST00000621856 PNPLA1Q8N8W4 532 aa21.49■■□□□ 1.03
SPAST-204ENST00000621856 NDNQ99608 321 aa21.49■■□□□ 1.03
SPAST-204ENST00000621856 MAGEE1Q9HCI5 957 aa21.49■■□□□ 1.03
SPAST-204ENST00000621856 GDE1Q9NZC3 331 aa21.49■■□□□ 1.03
SPAST-204ENST00000621856 SLCO3A1Q9UIG8 710 aa21.49■■□□□ 1.03
SPAST-204ENST00000621856 ERVW-1Q9UQF0 538 aa21.49■■□□□ 1.03
SPAST-204ENST00000621856 STARD13Q9Y3M8 1113 aa21.49■■□□□ 1.03
SPAST-204ENST00000621856 USP15Q9Y4E8 981 aaPredicted RBP21.49■■□□□ 1.03
SPAST-204ENST00000621856 HEPACAM2A8MVW5 462 aa21.48■■□□□ 1.03
SPAST-204ENST00000621856 HOXC11O43248 304 aaPredicted RBP21.48■■□□□ 1.03
SPAST-204ENST00000621856 NFATC1O95644 943 aa21.48■■□□□ 1.03
SPAST-204ENST00000621856 ALPIP09923 528 aa21.48■■□□□ 1.03
SPAST-204ENST00000621856 ARSAP15289 507 aa21.48■■□□□ 1.03
SPAST-204ENST00000621856 OGNP20774 298 aaKnown RBP21.48■■□□□ 1.03
SPAST-204ENST00000621856 PMLP29590 882 aa21.48■■□□□ 1.03
SPAST-204ENST00000621856 CSRP3P50461 194 aa21.48■■□□□ 1.03
SPAST-204ENST00000621856 TAS2R39P59534 338 aa21.48■■□□□ 1.03
SPAST-204ENST00000621856 CHI3L2Q15782 390 aa21.48■■□□□ 1.03
SPAST-204ENST00000621856 GEN1Q17RS7 908 aa21.48■■□□□ 1.03
SPAST-204ENST00000621856 CGB2Q6NT52 195 aa21.48■■□□□ 1.03
SPAST-204ENST00000621856 CEP97Q8IW35 865 aa21.48■■□□□ 1.03
SPAST-204ENST00000621856 E2F7Q96AV8 911 aa21.48■■□□□ 1.03
SPAST-204ENST00000621856 ASIC4Q96FT7 647 aa21.48■■□□□ 1.03
SPAST-204ENST00000621856 ZFYVE19Q96K21 471 aa21.48■■□□□ 1.03
SPAST-204ENST00000621856 TUBGCP5Q96RT8 1024 aa21.48■■□□□ 1.03
SPAST-204ENST00000621856 OMDQ99983 421 aa21.48■■□□□ 1.03
SPAST-204ENST00000621856 TSSK1BQ9BXA7 367 aa21.48■■□□□ 1.03
SPAST-204ENST00000621856 ZDHHC6Q9H6R6 413 aa21.48■■□□□ 1.03
SPAST-204ENST00000621856 BPIFA1Q9NP55 256 aa21.48■■□□□ 1.03
SPAST-204ENST00000621856 ACOT9Q9Y305 439 aa21.48■■□□□ 1.03
SPAST-204ENST00000621856 SLC35E2BP0CK96 405 aa21.47■■□□□ 1.03
SPAST-204ENST00000621856 PSMA3P25788 255 aa21.47■■□□□ 1.03
SPAST-204ENST00000621856 CCNHP51946 323 aaPredicted RBP21.47■■□□□ 1.03
SPAST-204ENST00000621856 PGGT1BP53609 377 aa21.47■■□□□ 1.03
SPAST-204ENST00000621856 RAD51Q06609 339 aa21.47■■□□□ 1.03
SPAST-204ENST00000621856 ILF2Q12905 390 aaKnown RBP21.47■■□□□ 1.03
SPAST-204ENST00000621856 SEMA3AQ14563 771 aa21.47■■□□□ 1.03
SPAST-204ENST00000621856 ZNF460Q14592 562 aa21.47■■□□□ 1.03
SPAST-204ENST00000621856 ITIH4Q14624 930 aa21.47■■□□□ 1.03
SPAST-204ENST00000621856 DBN1Q16643 649 aa21.47■■□□□ 1.03
SPAST-204ENST00000621856 COL13A1Q5TAT6 717 aaPredicted RBP21.47■■□□□ 1.03
SPAST-204ENST00000621856 ATG16L1Q676U5 607 aa21.47■■□□□ 1.03
SPAST-204ENST00000621856 TMEM215Q68D42 235 aa21.47■■□□□ 1.03
SPAST-204ENST00000621856 TMEM184AQ6ZMB5 413 aa21.47■■□□□ 1.03
SPAST-204ENST00000621856 OTOAQ7RTW8 1153 aa21.47■■□□□ 1.03
SPAST-204ENST00000621856 ST13P5Q8NFI4 369 aaPredicted RBP21.47■■□□□ 1.03
SPAST-204ENST00000621856 PPP1R14CQ8TAE6 165 aa21.47■■□□□ 1.03
SPAST-204ENST00000621856 CYB5D2Q8WUJ1 264 aa21.47■■□□□ 1.03
SPAST-204ENST00000621856 MYLIPQ8WY64 445 aa21.47■■□□□ 1.03
SPAST-204ENST00000621856 TSPAN17Q96FV3 270 aa21.47■■□□□ 1.03
SPAST-204ENST00000621856 SIRPGQ9P1W8 387 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms