RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 MAP2K7O14733 419 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 BUB1O43683 1085 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 PPFIA2O75334 1257 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 TMCC1O94876 653 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 IGSF6O95976 241 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 CYP11B1P15538 503 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 GLB1P16278 677 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 ITIH2P19823 946 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 EEF1GP26641 437 aaKnown RBP7.89□□□□□ -1.15
CLK1-215ENST00000621181 GABRB2P47870 512 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 MAPK10P53779 464 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 SRP54P61011 504 aaKnown RBP7.89□□□□□ -1.15
CLK1-215ENST00000621181 CYP4F2P78329 520 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 TLE1Q04724 770 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 ELP6Q0PNE2 266 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 RAPGEF1Q13905 1077 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 INPP5AQ14642 412 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 NFATC4Q14934 902 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 CDO1Q16878 200 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 MAP9Q49MG5 647 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 COLEC12Q5KU26 742 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 PHF19Q5T6S3 580 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 TMEM164Q5U3C3 297 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 TAF3Q5VWG9 929 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 TRNP1Q6NT89 227 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 WDR59Q6PJI9 974 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 ZFAND4Q86XD8 727 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 ATL2Q8NHH9 583 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 SEMA3CQ99985 751 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 NCAPGQ9BPX3 1015 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 SLC25A18Q9H1K4 315 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 VPS16Q9H269 839 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 ANKZF1Q9H8Y5 726 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 ARGLU1Q9NWB6 273 aaPredicted RBP7.89□□□□□ -1.15
CLK1-215ENST00000621181 FOXJ2Q9P0K8 574 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 AKAP7Q9P0M2 348 aaPredicted RBP7.89□□□□□ -1.15
CLK1-215ENST00000621181 MYO1AQ9UBC5 1043 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 SEPT3Q9UH03 358 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 AJAP1Q9UKB5 411 aaPredicted RBP7.89□□□□□ -1.15
CLK1-215ENST00000621181 RNF215Q9Y6U7 377 aa7.89□□□□□ -1.15
CLK1-215ENST00000621181 BSNQ9UPA5 3926 aa7.88□□□□□ -1.15
CLK1-215ENST00000621181 ARHGEF17Q96PE2 2063 aaPredicted RBP7.88□□□□□ -1.15
CLK1-215ENST00000621181 CCDC151A5D8V7 595 aa7.88□□□□□ -1.15
CLK1-215ENST00000621181 KIF5CO60282 957 aa7.88□□□□□ -1.15
CLK1-215ENST00000621181 TNFP01375 233 aa7.88□□□□□ -1.15
CLK1-215ENST00000621181 PCCBP05166 539 aa7.88□□□□□ -1.15
CLK1-215ENST00000621181 RHOQP17081 205 aa7.88□□□□□ -1.15
CLK1-215ENST00000621181 CDH5P33151 784 aaPredicted RBP7.88□□□□□ -1.15
CLK1-215ENST00000621181 ADRA1BP35368 520 aa7.88□□□□□ -1.15
CLK1-215ENST00000621181 MTIF2P46199 727 aaKnown RBP7.88□□□□□ -1.15
CLK1-215ENST00000621181 RHOAP61586 193 aa7.88□□□□□ -1.15
CLK1-215ENST00000621181 LSM11P83369 360 aaKnown RBP eCLIP7.88□□□□□ -1.155e-9■■□□□ 11.5
CLK1-215ENST00000621181 ZFP36L1Q07352 338 aaKnown RBP7.88□□□□□ -1.15
CLK1-215ENST00000621181 ARHGEF7Q14155 803 aa7.88□□□□□ -1.15
CLK1-215ENST00000621181 BRD3Q15059 726 aa7.88□□□□□ -1.15
CLK1-215ENST00000621181 TBR1Q16650 682 aa7.88□□□□□ -1.15
CLK1-215ENST00000621181 WSCD2Q2TBF2 565 aa7.88□□□□□ -1.15
CLK1-215ENST00000621181 CERCAMQ5T4B2 595 aa7.88□□□□□ -1.15
CLK1-215ENST00000621181 CFAP58Q5T655 872 aa7.88□□□□□ -1.15
CLK1-215ENST00000621181 TAF8Q7Z7C8 310 aa7.88□□□□□ -1.15
CLK1-215ENST00000621181 NLRP14Q86W24 1093 aa7.88□□□□□ -1.15
CLK1-215ENST00000621181 FAM71AQ8IYT1 594 aa7.88□□□□□ -1.15
CLK1-215ENST00000621181 SLC35F6Q8N357 371 aa7.88□□□□□ -1.15
CLK1-215ENST00000621181 EMC1Q8N766 993 aa7.88□□□□□ -1.15
CLK1-215ENST00000621181 NETO2Q8NC67 525 aa7.88□□□□□ -1.15
CLK1-215ENST00000621181 FAM46DQ8NEK8 389 aa7.88□□□□□ -1.15
CLK1-215ENST00000621181 JPH3Q8WXH2 748 aaPredicted RBP7.88□□□□□ -1.15
CLK1-215ENST00000621181 USP7Q93009 1102 aa7.88□□□□□ -1.15
CLK1-215ENST00000621181 TBC1D31Q96DN5 1066 aa7.88□□□□□ -1.15
CLK1-215ENST00000621181 PDXPQ96GD0 296 aa7.88□□□□□ -1.15
CLK1-215ENST00000621181 RBM15Q96T37 977 aaKnown RBP eCLIP7.88□□□□□ -1.155e-8■■■□□ 15.1
CLK1-215ENST00000621181 CHP1Q99653 195 aa7.88□□□□□ -1.15
CLK1-215ENST00000621181 APOOQ9BUR5 198 aa7.88□□□□□ -1.15
CLK1-215ENST00000621181 DPEP2Q9H4A9 486 aa7.88□□□□□ -1.15
CLK1-215ENST00000621181 RETREG1Q9H6L5 497 aa7.88□□□□□ -1.15
CLK1-215ENST00000621181 LZTFL1Q9NQ48 299 aa7.88□□□□□ -1.15
CLK1-215ENST00000621181 METTL5Q9NRN9 209 aaKnown RBP7.88□□□□□ -1.15
CLK1-215ENST00000621181 TMEM248Q9NWD8 314 aa7.88□□□□□ -1.15
CLK1-215ENST00000621181 LRIT1Q9P2V4 623 aa7.88□□□□□ -1.15
CLK1-215ENST00000621181 DKK3Q9UBP4 350 aa7.88□□□□□ -1.15
CLK1-215ENST00000621181 TMEM59LQ9UK28 342 aa7.88□□□□□ -1.15
CLK1-215ENST00000621181 APPL1Q9UKG1 709 aa7.88□□□□□ -1.15
CLK1-215ENST00000621181 CAPN11Q9UMQ6 739 aa7.88□□□□□ -1.15
CLK1-215ENST00000621181 FLNCQ14315 2725 aa7.87□□□□□ -1.15
CLK1-215ENST00000621181 LRRK2Q5S007 2527 aa7.87□□□□□ -1.15
CLK1-215ENST00000621181 LRRK1Q38SD2 2015 aa7.87□□□□□ -1.15
CLK1-215ENST00000621181 B4DGG1 531 aa7.87□□□□□ -1.15
CLK1-215ENST00000621181 STMND1H3BQB6 276 aa7.87□□□□□ -1.15
CLK1-215ENST00000621181 LRIG2O94898 1065 aa7.87□□□□□ -1.15
CLK1-215ENST00000621181 LSM8O95777 96 aaKnown RBP7.87□□□□□ -1.15
CLK1-215ENST00000621181 TIMP2P16035 220 aa7.87□□□□□ -1.15
CLK1-215ENST00000621181 PNLIPP16233 465 aa7.87□□□□□ -1.15
CLK1-215ENST00000621181 CD82P27701 267 aa7.87□□□□□ -1.15
CLK1-215ENST00000621181 SDC4P31431 198 aa7.87□□□□□ -1.15
CLK1-215ENST00000621181 ETV5P41161 510 aa7.87□□□□□ -1.15
CLK1-215ENST00000621181 NRG1Q02297 640 aaPredicted RBP7.87□□□□□ -1.15
CLK1-215ENST00000621181 UGP2Q16851 508 aa7.87□□□□□ -1.15
CLK1-215ENST00000621181 C15orf59Q2T9L4 293 aaPredicted RBP7.87□□□□□ -1.15
CLK1-215ENST00000621181 ZNF569Q5MCW4 686 aa7.87□□□□□ -1.15
CLK1-215ENST00000621181 BEND6Q5SZJ8 279 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms