RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 LRRC23Q53EV4 343 aaPredicted RBP8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 PDPK2PQ6A1A2 396 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 FAM151BQ6UXP7 276 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 CCDC149Q6ZUS6 474 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 ARCQ7LC44 396 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 ANKRD52Q8NB46 1076 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 GPR156Q8NFN8 814 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 FAR2Q96K12 515 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 SPATA13Q96N96 652 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 TSEN34Q9BSV6 310 aaKnown RBP8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 CCDC106Q9BWC9 280 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 ARHGAP39Q9C0H5 1083 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 ALG9Q9H6U8 611 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 NMUR1Q9HB89 426 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 MID1IP1Q9NPA3 183 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 SYBUQ9NX95 663 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 CCDC167Q9P0B6 97 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 UXTQ9UBK9 157 aaPredicted RBP8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 DYRK1BQ9Y463 629 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 ENPP3O14638 875 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 MFSD11O43934 449 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 KLHL2O95198 593 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 SERPINE1P05121 402 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 TPSB2P20231 275 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 TCEA1P23193 301 aaKnown RBP8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 CCNFP41002 786 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 PRKCQQ04759 706 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 UBXN2BQ14CS0 331 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 TPSAB1Q15661 275 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 PLA2G4EQ3MJ16 856 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 LPCAT4Q643R3 524 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 AZIN2Q96A70 460 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 RTP4Q96DX8 246 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 P2RY11Q96G91 374 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 TCF25Q9BQ70 676 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 POLR1EQ9GZS1 481 aaKnown RBP8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 ZFP14Q9HCL3 533 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 ZDHHC4Q9NPG8 344 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 IMP3Q9NV31 184 aaKnown RBP8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 CLDND1Q9NY35 253 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 TMEM216Q9P0N5 145 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 PCDHGC4Q9Y5F7 938 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 A0A1W2PQ67 120 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 TIMM44O43615 452 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 PLIN3O60664 434 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 PFDN1O60925 122 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 SIN3BO75182 1162 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 RNASEH2AO75792 299 aaKnown RBP8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 TOMM70O94826 608 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 NR2C2P49116 596 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 RPS7P62081 194 aaKnown RBP8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 PLOD1Q02809 727 aaPredicted RBP8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 LAMB3Q13751 1172 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 ATAT1Q5SQI0 421 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 RARS2Q5T160 578 aaKnown RBP8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 OTUD3Q5T2D3 398 aaPredicted RBP8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 TEDDM1Q5T9Z0 273 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 C4orf22Q6V702 233 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 SLC35F5Q8WV83 523 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 APBB2Q92870 758 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 NRBF2Q96F24 287 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 QKIQ96PU8 341 aaKnown RBP eCLIP8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 WRAP53Q9BUR4 548 aaKnown RBP8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 MLPHQ9BV36 600 aaPredicted RBP8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 DCDC2Q9UHG0 476 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 RGPD3A6NKT7 1758 aaPredicted RBP8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 RGPD4Q7Z3J3 1758 aa8.31□□□□□ -1.08
PTPDC1-204ENST00000620992 TSPAN1O60635 241 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 SNNO75324 88 aaPredicted RBP8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 SEC22BO75396 215 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 MLNP12872 115 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 ZNF7P17097 686 aaPredicted RBP8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 CCND3P30281 292 aaPredicted RBP8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 GLUD2P49448 558 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 PRKAA1Q13131 559 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 PRKG2Q13237 762 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 DPYSL2Q16555 572 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 CPSF6Q16630 551 aaKnown RBP eCLIP8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 SH3D19Q5HYK7 790 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 ZNF618Q5T7W0 954 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 C9orf57Q5W0N0 161 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 NCBP2-AS2Q69YL0 99 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 TMEM110Q86TL2 294 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 IFNL1Q8IU54 200 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 FBXO39Q8N4B4 442 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 FNDC5Q8NAU1 212 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 OR7D4Q8NG98 312 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 TEX12Q9BXU0 123 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 SLC4A5Q9BY07 1137 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 CAB39LQ9H9S4 337 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 TAS2R13Q9NYV9 303 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 USE1Q9NZ43 259 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 DEC1Q9P2X7 70 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 KLQ9UEF7 1012 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 EVLQ9UI08 416 aaPredicted RBP8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 GABRQQ9UN88 632 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 MCM3APO60318 1980 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 ISM1B1AKI9 464 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms