RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 CAPN8A6NHC0 703 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 WNT9AO14904 365 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 SLC7A4O43246 635 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 AP1G1O43747 822 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 LILRB5O75023 590 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 SUN1O94901 812 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 EPOP01588 193 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 GRIA4P48058 902 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 LMAN1P49257 510 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 POLR2LP62875 67 aaKnown RBP13.67□□□□□ -0.22
NEK3-210ENST00000620675 PLK5Q496M5 336 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 CERCAMQ5T4B2 595 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 RNASEH2BQ5TBB1 312 aaKnown RBP13.67□□□□□ -0.22
NEK3-210ENST00000620675 LIPIQ6XZB0 460 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 HSD11B1LQ7Z5J1 315 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 PELI3Q8N2H9 469 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 MMGT1Q8N4V1 131 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 OR2T34Q8NGX1 318 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 BLOC1S5Q8TDH9 187 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 SPACA7Q96KW9 195 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 HSPA12BQ96MM6 686 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 ADGRE3Q9BY15 652 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 FAM126AQ9BYI3 521 aaPredicted RBP13.67□□□□□ -0.22
NEK3-210ENST00000620675 CA5BQ9Y2D0 317 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 KCTD3Q9Y597 815 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 SPEGQ15772 3267 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 CCDC78A2IDD5 438 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 EFCAB8A8MWE9 144 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 DNALI1O14645 258 aaPredicted RBP13.67□□□□□ -0.22
NEK3-210ENST00000620675 MAP3K13O43283 966 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 FSBPO95073 299 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 C1SP09871 688 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 C6P13671 934 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 CA4P22748 312 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 OXTRP30559 389 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 CRADDP78560 199 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 PTSQ03393 145 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 ZNF284Q2VY69 593 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 TMEM52BQ4KMG9 183 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 TMEM259Q4ZIN3 620 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 IZUMO3Q5VZ72 239 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 ERAP2Q6P179 960 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 USP45Q70EL2 814 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 CAND1Q86VP6 1230 aaKnown RBP13.67□□□□□ -0.22
NEK3-210ENST00000620675 AGGF1Q8N302 714 aaeCLIP13.67□□□□□ -0.22
NEK3-210ENST00000620675 NAT8LQ8N9F0 302 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 RAB7BQ96AH8 199 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 ORAI3Q9BRQ5 295 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.67□□□□□ -0.22
NEK3-210ENST00000620675 PCDHGA2Q9Y5H1 932 aa13.67□□□□□ -0.22
NEK3-210ENST00000620675 PIKFYVEQ9Y2I7 2098 aa13.66□□□□□ -0.22
NEK3-210ENST00000620675 FAM186AA6NE01 2351 aa13.66□□□□□ -0.22
NEK3-210ENST00000620675 C1orf232A0A0U1RR37 186 aa13.66□□□□□ -0.22
NEK3-210ENST00000620675 RAD51BO15315 384 aa13.66□□□□□ -0.22
NEK3-210ENST00000620675 SLC31A1O15431 190 aa13.66□□□□□ -0.22
NEK3-210ENST00000620675 NDUFS2O75306 463 aa13.66□□□□□ -0.22
NEK3-210ENST00000620675 BANF1O75531 89 aa13.66□□□□□ -0.22
NEK3-210ENST00000620675 SEC31AO94979 1220 aaKnown RBP13.66□□□□□ -0.22
NEK3-210ENST00000620675 HEXIM1O94992 359 aaKnown RBP13.66□□□□□ -0.22
NEK3-210ENST00000620675 FGF1P05230 155 aa13.66□□□□□ -0.22
NEK3-210ENST00000620675 HLA-DPA1P20036 260 aa13.66□□□□□ -0.22
NEK3-210ENST00000620675 VIPR1P32241 457 aa13.66□□□□□ -0.22
NEK3-210ENST00000620675 MAGEA6P43360 314 aa13.66□□□□□ -0.22
NEK3-210ENST00000620675 NUBP1P53384 320 aa13.66□□□□□ -0.22
NEK3-210ENST00000620675 RPL26P61254 145 aaKnown RBP13.66□□□□□ -0.22
NEK3-210ENST00000620675 POU6F1Q14863 301 aa13.66□□□□□ -0.22
NEK3-210ENST00000620675 CCDC38Q502W7 563 aa13.66□□□□□ -0.22
NEK3-210ENST00000620675 C8orf74Q6P047 294 aa13.66□□□□□ -0.22
NEK3-210ENST00000620675 PRR23BQ6ZRT6 265 aa13.66□□□□□ -0.22
NEK3-210ENST00000620675 HORMAD1Q86X24 394 aa13.66□□□□□ -0.22
NEK3-210ENST00000620675 CEP112Q8N8E3 955 aa13.66□□□□□ -0.22
NEK3-210ENST00000620675 MNS1Q8NEH6 495 aa13.66□□□□□ -0.22
NEK3-210ENST00000620675 SNX19Q92543 992 aa13.66□□□□□ -0.22
NEK3-210ENST00000620675 FUBP1Q96AE4 644 aaKnown RBP13.66□□□□□ -0.22
NEK3-210ENST00000620675 TRIM56Q9BRZ2 755 aaKnown RBP13.66□□□□□ -0.22
NEK3-210ENST00000620675 ERP44Q9BS26 406 aa13.66□□□□□ -0.22
NEK3-210ENST00000620675 ARNT2Q9HBZ2 717 aa13.66□□□□□ -0.22
NEK3-210ENST00000620675 PREBQ9HCU5 417 aa13.66□□□□□ -0.22
NEK3-210ENST00000620675 CASS4Q9NQ75 786 aa13.66□□□□□ -0.22
NEK3-210ENST00000620675 GRHL1Q9NZI5 618 aa13.66□□□□□ -0.22
NEK3-210ENST00000620675 CD84Q9UIB8 345 aa13.66□□□□□ -0.22
NEK3-210ENST00000620675 RPL26L1Q9UNX3 145 aaKnown RBP13.66□□□□□ -0.22
NEK3-210ENST00000620675 ZNF711Q9Y462 761 aa13.66□□□□□ -0.22
NEK3-210ENST00000620675 ARL5AQ9Y689 179 aa13.66□□□□□ -0.22
NEK3-210ENST00000620675 CFAP54Q96N23 3096 aa13.66□□□□□ -0.22
NEK3-210ENST00000620675 ATXN2Q99700 1313 aaKnown RBP13.66□□□□□ -0.22
NEK3-210ENST00000620675 LRRC72A6NJI9 287 aa13.65□□□□□ -0.22
NEK3-210ENST00000620675 PAK4O96013 591 aaPredicted RBP13.65□□□□□ -0.22
NEK3-210ENST00000620675 ELFN1P0C7U0 828 aa13.65□□□□□ -0.22
NEK3-210ENST00000620675 TPSB2P20231 275 aa13.65□□□□□ -0.22
NEK3-210ENST00000620675 ETV3P41162 512 aa13.65□□□□□ -0.22
NEK3-210ENST00000620675 ITGA8P53708 1063 aa13.65□□□□□ -0.22
NEK3-210ENST00000620675 SESN2P58004 480 aaPredicted RBP13.65□□□□□ -0.22
NEK3-210ENST00000620675 ELP6Q0PNE2 266 aa13.65□□□□□ -0.22
NEK3-210ENST00000620675 SIM2Q14190 667 aaPredicted RBP13.65□□□□□ -0.22
NEK3-210ENST00000620675 TPSAB1Q15661 275 aa13.65□□□□□ -0.22
NEK3-210ENST00000620675 PMS2CLQ68D20 193 aa13.65□□□□□ -0.22
NEK3-210ENST00000620675 KIAA0895LQ68EN5 471 aa13.65□□□□□ -0.22
NEK3-210ENST00000620675 DUPD1Q68J44 220 aa13.65□□□□□ -0.22
NEK3-210ENST00000620675 C4orf22Q6V702 233 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms