RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 RDH11Q8TC12 318 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 CYGBQ8WWM9 190 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 SGF29Q96ES7 293 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 CNDP1Q96KN2 507 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 ZNF778Q96MU6 729 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 SORT1Q99523 831 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 SMOQ99835 787 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 PAIP1Q9H074 479 aaKnown RBP7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 TRPC7Q9HCX4 862 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 ANKRD6Q9Y2G4 727 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 ACOT9Q9Y305 439 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 M0QZQ0 153 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 AP3B1O00203 1094 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 VILLO15195 856 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 CRCPO75575 148 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 NCAM1P13591 858 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 CSF2RAP15509 400 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 GOT1P17174 413 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 TFEBP19484 476 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 TYMPP19971 482 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 DSC1Q08554 894 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 LRRC26Q2I0M4 334 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 ARL13AQ5H913 290 aaPredicted RBP7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 VARS2Q5ST30 1063 aaKnown RBP7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 FSTL4Q6MZW2 842 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 SLC26A9Q7LBE3 791 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 LIMS2Q7Z4I7 341 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 TMCO2Q7Z6W1 182 aaPredicted RBP7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 LRRTM3Q86VH5 581 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 MYO1HQ8N1T3 1032 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 CNTD1Q8N815 330 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 P2RY11Q96G91 374 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 VPS39Q96JC1 886 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 FAR2Q96K12 515 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 APOL2Q9BQE5 337 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 DTLQ9NZJ0 730 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 PKD2L2Q9NZM6 624 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 EMCNQ9ULC0 261 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 SAC3D1A6NKF1 404 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 M0QYT0 321 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 UBDO15205 165 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 PHGDHO43175 533 aaKnown RBP7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 CBFA2T3O75081 653 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 AMHP03971 560 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 CHRNGP07510 517 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 SMIM18P0DKX4 95 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 MAP4P27816 1152 aaKnown RBP7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 CSE1LP55060 971 aaKnown RBP7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 TUBB3Q13509 450 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 SLC12A1Q13621 1099 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 FASTKQ14296 549 aaKnown RBP7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 NFE2Q16621 373 aaPredicted RBP7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 TCTN1Q2MV58 587 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 RAB6CQ53S08 254 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 SAMD4BQ5PRF9 694 aaKnown RBP7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 CES4AQ5XG92 561 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 ZNF280DQ6N043 979 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 OTOP2Q7RTS6 562 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 DHFR2Q86XF0 187 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 FAM47BQ8NA70 645 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 FAM156AQ8NDB6 213 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 SLC7A14Q8TBB6 771 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 ATP6V1E2Q96A05 226 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 CASD1Q96PB1 797 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 CIB1Q99828 191 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 GPR62Q9BZJ7 368 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 RAB6CQ9H0N0 254 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 EIF2B3Q9NR50 452 aaKnown RBP7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 TMLHEQ9NVH6 421 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 PADI4Q9UM07 663 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 NR2E3Q9Y5X4 410 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 TET1Q8NFU7 2136 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 MAGEB16A2A368 324 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 MTSS1O43312 755 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 TPST1O60507 370 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 GABBR2O75899 941 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 BCAS2O75934 225 aaPredicted RBP7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 ENDOD1O94919 500 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 CYP11A1P05108 521 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 GALTP07902 379 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 CDK4P11802 303 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 ZNF23P17027 643 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 PAMP19021 973 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 ATXN1P54253 815 aaKnown RBP7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 TPI1P60174 286 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 NIPAL4Q0D2K0 466 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 BTG3Q14201 252 aaPredicted RBP7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 HERC3Q15034 1050 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 MGAT5BQ3V5L5 792 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 SDHAF4Q5VUM1 108 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 STEAP4Q687X5 459 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 FUT10Q6P4F1 479 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 CNKSR3Q6P9H4 555 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 CD300LGQ6UXG3 332 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 LRRC43Q8N309 656 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 DNAJC5GQ8N7S2 189 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 ATAD1Q8NBU5 361 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 GIPC3Q8TF64 312 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 ARMC5Q96C12 935 aa7.01□□□□□ -1.29
SRGAP3-213ENST00000618999 HDAC11Q96DB2 347 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms