RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 CYP11A1P05108 521 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 APOA4P06727 396 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 ALDOCP09972 364 aaKnown RBP4.34□□□□□ -1.72
SEC22B-202ENST00000618538 PRSS56P0CW18 603 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 COL6A2P12110 1019 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 NELFEP18615 380 aaKnown RBP4.34□□□□□ -1.72
SEC22B-202ENST00000618538 CD52P31358 61 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 CD151P48509 253 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 PSMD8P48556 350 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 PRKAA2P54646 552 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 FOXA1P55317 472 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 SATB1Q01826 763 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 DSC2Q02487 901 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 CREB5Q02930 508 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 SLC10A7Q0GE19 358 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 APOFQ13790 326 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 RFTN1Q14699 578 aaPredicted RBP4.34□□□□□ -1.72
SEC22B-202ENST00000618538 SLC14A2Q15849 920 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 FSCN1Q16658 493 aaKnown RBP4.34□□□□□ -1.72
SEC22B-202ENST00000618538 UGT3A2Q3SY77 523 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 NADK2Q4G0N4 442 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 ALFQ53S48 1182 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 REP15Q6BDI9 236 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 NEPROQ6NW34 567 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 ZNF549Q6P9A3 640 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 C16orf89Q6UX73 402 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 CXCL17Q6UXB2 119 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 TFAP2DQ7Z6R9 452 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 LINC00523Q86TU6 105 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 FUNDC1Q8IVP5 155 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 CHERPQ8IWX8 916 aaKnown RBP4.34□□□□□ -1.72
SEC22B-202ENST00000618538 SCML4Q8N228 414 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 TTC9BQ8N6N2 239 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 RTL3Q8N8U3 475 aaKnown RBP4.34□□□□□ -1.72
SEC22B-202ENST00000618538 KLHDC9Q8NEP7 349 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 HMCESQ96FZ2 354 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 SH3GL3Q99963 347 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 TRIM8Q9BZR9 551 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 MEAF6Q9HAF1 191 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 MRM3Q9HC36 420 aaKnown RBP4.34□□□□□ -1.72
SEC22B-202ENST00000618538 DMAP1Q9NPF5 467 aaPredicted RBP4.34□□□□□ -1.72
SEC22B-202ENST00000618538 VPS45Q9NRW7 570 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 RBM22Q9NW64 420 aaKnown RBP eCLIP4.34□□□□□ -1.72
SEC22B-202ENST00000618538 C6orf203Q9P0P8 240 aaPredicted RBP4.34□□□□□ -1.72
SEC22B-202ENST00000618538 CD300AQ9UGN4 299 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 APPL1Q9UKG1 709 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 SARDHQ9UL12 918 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.34□□□□□ -1.72
SEC22B-202ENST00000618538 ACTL7AQ9Y615 435 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 PLXNA3P51805 1871 aa4.34□□□□□ -1.72
SEC22B-202ENST00000618538 TDRD15B5MCY1 1934 aaKnown RBP4.33□□□□□ -1.72
SEC22B-202ENST00000618538 ATP6AP2A0A1C7CYW4 349 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 A0A1W2PQH9 124 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 H3BMM5 538 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 M0QZQ0 153 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 ATP6AP2O75787 350 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 ANXA9O76027 345 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 B3GAT3O94766 335 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 CSPG5O95196 566 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 C8BP07358 591 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 ATXN1LP0C7T5 689 aaKnown RBP4.33□□□□□ -1.72
SEC22B-202ENST00000618538 CCDC166P0CW27 439 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 CHRM3P20309 590 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 ATP6V1B2P21281 511 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 FGFR3P22607 806 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 ME2P23368 584 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 ATP5F1P24539 256 aaPredicted RBP4.33□□□□□ -1.72
SEC22B-202ENST00000618538 RPL10P27635 214 aaKnown RBP4.33□□□□□ -1.72
SEC22B-202ENST00000618538 PCSK6P29122 969 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 HADHAP40939 763 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 CD86P42081 329 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 DNAJB13P59910 316 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 PSME3P61289 254 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 ZNF33AQ06730 810 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 CACNB2Q08289 660 aaPredicted RBP4.33□□□□□ -1.72
SEC22B-202ENST00000618538 LSAMPQ13449 338 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 PRPSAP1Q14558 356 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 MYLK3Q32MK0 819 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 USP41Q3LFD5 358 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 MGAT5BQ3V5L5 792 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 SETMARQ53H47 684 aaPredicted RBP4.33□□□□□ -1.72
SEC22B-202ENST00000618538 MTX3Q5HYI7 312 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 GPR158Q5T848 1215 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 PIWIL4Q7Z3Z4 852 aaKnown RBP4.33□□□□□ -1.72
SEC22B-202ENST00000618538 MRPL10Q7Z7H8 261 aaKnown RBP4.33□□□□□ -1.72
SEC22B-202ENST00000618538 CUZD1Q86UP6 607 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 CIR1Q86X95 450 aaPredicted RBP4.33□□□□□ -1.72
SEC22B-202ENST00000618538 RNF135Q8IUD6 432 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 CILP2Q8IUL8 1156 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 PHYKPLQ8IUZ5 450 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 CCDC117Q8IWD4 279 aaPredicted RBP4.33□□□□□ -1.72
SEC22B-202ENST00000618538 ST13P4Q8IZP2 240 aaPredicted RBP4.33□□□□□ -1.72
SEC22B-202ENST00000618538 GALNT4Q8N4A0 578 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 ZNF511Q8NB15 262 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 ICA1LQ8NDH6 482 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 PPHLN1Q8NEY8 458 aaKnown RBP4.33□□□□□ -1.72
SEC22B-202ENST00000618538 ARRDC2Q8TBH0 407 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 PDCD6IPQ8WUM4 868 aaKnown RBP4.33□□□□□ -1.72
SEC22B-202ENST00000618538 RSPH1Q8WYR4 309 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 LRTOMTQ8WZ04 291 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms