RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 CEP63Q96MT8 703 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 NT5C1BQ96P26 610 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 NUDT22Q9BRQ3 303 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 TRIM56Q9BRZ2 755 aaKnown RBP4.59□□□□□ -1.67
SNCA-213ENST00000618500 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.59□□□□□ -1.67
SNCA-213ENST00000618500 TTYH3Q9C0H2 523 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 SYNDIG1Q9H7V2 258 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 MRPL40Q9NQ50 206 aaKnown RBP4.59□□□□□ -1.67
SNCA-213ENST00000618500 ZNF71Q9NQZ8 489 aaPredicted RBP4.59□□□□□ -1.67
SNCA-213ENST00000618500 SIRPGQ9P1W8 387 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 GGT7Q9UJ14 662 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 SRPK3Q9UPE1 567 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 RPS6KL1Q9Y6S9 549 aa4.59□□□□□ -1.67
SNCA-213ENST00000618500 ANKRD17O75179 2603 aaKnown RBP4.59□□□□□ -1.67
SNCA-213ENST00000618500 K7ERQ8 282 aa4.59□□□□□ -1.68
SNCA-213ENST00000618500 MOCS2O96007 188 aaPredicted RBP4.59□□□□□ -1.68
SNCA-213ENST00000618500 PDGFAP04085 211 aa4.59□□□□□ -1.68
SNCA-213ENST00000618500 ERBB2P04626 1255 aa4.59□□□□□ -1.68
SNCA-213ENST00000618500 CD1EP15812 388 aa4.59□□□□□ -1.68
SNCA-213ENST00000618500 GM2AP17900 193 aa4.59□□□□□ -1.68
SNCA-213ENST00000618500 OR1D5P58170 312 aa4.59□□□□□ -1.68
SNCA-213ENST00000618500 IRX6P78412 446 aaPredicted RBP4.59□□□□□ -1.68
SNCA-213ENST00000618500 LRRC63Q05C16 580 aa4.59□□□□□ -1.68
SNCA-213ENST00000618500 INAQ16352 499 aa4.59□□□□□ -1.68
SNCA-213ENST00000618500 CBWD6Q4V339 395 aa4.59□□□□□ -1.68
SNCA-213ENST00000618500 ALFQ53S48 1182 aa4.59□□□□□ -1.68
SNCA-213ENST00000618500 RALGPS1Q5JS13 557 aa4.59□□□□□ -1.68
SNCA-213ENST00000618500 CBWD3Q5JTY5 395 aa4.59□□□□□ -1.68
SNCA-213ENST00000618500 CBWD5Q5RIA9 395 aa4.59□□□□□ -1.68
SNCA-213ENST00000618500 VWA5B1Q5TIE3 1220 aa4.59□□□□□ -1.68
SNCA-213ENST00000618500 IZUMO3Q5VZ72 239 aa4.59□□□□□ -1.68
SNCA-213ENST00000618500 ADAMTSL4Q6UY14 1074 aa4.59□□□□□ -1.68
SNCA-213ENST00000618500 GDF7Q7Z4P5 450 aa4.59□□□□□ -1.68
SNCA-213ENST00000618500 TAF8Q7Z7C8 310 aa4.59□□□□□ -1.68
SNCA-213ENST00000618500 VPS36Q86VN1 386 aa4.59□□□□□ -1.68
SNCA-213ENST00000618500 KMT5CQ86Y97 462 aa4.59□□□□□ -1.68
SNCA-213ENST00000618500 RHOT1Q8IXI2 618 aa4.59□□□□□ -1.68
SNCA-213ENST00000618500 RBM12BQ8IXT5 1001 aaKnown RBP4.59□□□□□ -1.68
SNCA-213ENST00000618500 GRIN3AQ8TCU5 1115 aa4.59□□□□□ -1.68
SNCA-213ENST00000618500 KLHL6Q8WZ60 621 aa4.59□□□□□ -1.68
SNCA-213ENST00000618500 HERPUD2Q9BSE4 406 aa4.59□□□□□ -1.68
SNCA-213ENST00000618500 ZDHHC6Q9H6R6 413 aa4.59□□□□□ -1.68
SNCA-213ENST00000618500 RMI1Q9H9A7 625 aa4.59□□□□□ -1.68
SNCA-213ENST00000618500 DDIT4Q9NX09 232 aa4.59□□□□□ -1.68
SNCA-213ENST00000618500 OCIAD1Q9NX40 245 aa4.59□□□□□ -1.68
SNCA-213ENST00000618500 TAAR2Q9P1P5 351 aa4.59□□□□□ -1.68
SNCA-213ENST00000618500 LHX3Q9UBR4 397 aa4.59□□□□□ -1.68
SNCA-213ENST00000618500 VANGL2Q9ULK5 521 aa4.59□□□□□ -1.68
SNCA-213ENST00000618500 MTMR6Q9Y217 621 aa4.59□□□□□ -1.68
SNCA-213ENST00000618500 A0A1B0GUH1 482 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 TCP11X1B4DZS4 312 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 RNF225M0QZC1 329 aaPredicted RBP4.58□□□□□ -1.68
SNCA-213ENST00000618500 E2F3O00716 465 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 CETN3O15182 167 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 IPO13O94829 963 aaKnown RBP4.58□□□□□ -1.68
SNCA-213ENST00000618500 MSL3P1P0C860 447 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 CD19P15391 556 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 RGS7P49802 495 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 AIF1P55008 147 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 YBEYP58557 167 aaPredicted RBP4.58□□□□□ -1.68
SNCA-213ENST00000618500 SLC6A3Q01959 620 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 ADAM9Q13443 819 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 DNASE1L3Q13609 305 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 ZNF235Q14590 738 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 STK38Q15208 465 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 SLC25A52Q3SY17 297 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 RPUSD3Q6P087 351 aaKnown RBP4.58□□□□□ -1.68
SNCA-213ENST00000618500 Q8N9G6 341 aaPredicted RBP4.58□□□□□ -1.68
SNCA-213ENST00000618500 ART4Q93070 314 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 TSACCQ96A04 125 aaPredicted RBP4.58□□□□□ -1.68
SNCA-213ENST00000618500 SLC35C1Q96A29 364 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 ELMO3Q96BJ8 720 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 IP6K3Q96PC2 410 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 MIS12Q9H081 205 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 TNKS2Q9H2K2 1166 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 FGF22Q9HCT0 170 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 ATP13A1Q9HD20 1204 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 CROTQ9UKG9 612 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 DNPEPQ9ULA0 475 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 STAP1Q9ULZ2 295 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 ATP8A1Q9Y2Q0 1164 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 PPIL1Q9Y3C6 166 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 PCDHB4Q9Y5E5 795 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 A6NCN8 305 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 OR5K4A6NMS3 321 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 E5RJQ4 531 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 K7EM74 188 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 CASC3O15234 703 aaKnown RBP4.58□□□□□ -1.68
SNCA-213ENST00000618500 POLR2DO15514 142 aaKnown RBP4.58□□□□□ -1.68
SNCA-213ENST00000618500 VEGFDO43915 354 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 MMP20O60882 483 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 STSP08842 583 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 BRD2P25440 801 aaKnown RBP4.58□□□□□ -1.68
SNCA-213ENST00000618500 DLSTP36957 453 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 FMO5P49326 533 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 MLLT10P55197 1068 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 ILF3Q12906 894 aaKnown RBP eCLIP4.58□□□□□ -1.68
SNCA-213ENST00000618500 RFTN1Q14699 578 aaPredicted RBP4.58□□□□□ -1.68
SNCA-213ENST00000618500 KLHL40Q2TBA0 621 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 B3GNTL1Q67FW5 361 aaPredicted RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms