RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 ALPIP09923 528 aa22.28■■□□□ 1.16
NEDD4L-237ENST00000617539 LHCGRP22888 699 aa22.28■■□□□ 1.16
NEDD4L-237ENST00000617539 HNRNPH3P31942 346 aaKnown RBP22.28■■□□□ 1.16
NEDD4L-237ENST00000617539 ACTN2P35609 894 aa22.28■■□□□ 1.16
NEDD4L-237ENST00000617539 TRIM23P36406 574 aa22.28■■□□□ 1.16
NEDD4L-237ENST00000617539 LSSP48449 732 aa22.28■■□□□ 1.16
NEDD4L-237ENST00000617539 RPIAP49247 311 aa22.28■■□□□ 1.16
NEDD4L-237ENST00000617539 DPYSL3Q14195 570 aa22.28■■□□□ 1.16
NEDD4L-237ENST00000617539 CNGA3Q16281 694 aa22.28■■□□□ 1.16
NEDD4L-237ENST00000617539 ESRP1Q6NXG1 681 aaKnown RBP22.28■■□□□ 1.16
NEDD4L-237ENST00000617539 LVRNQ6Q4G3 990 aa22.28■■□□□ 1.16
NEDD4L-237ENST00000617539 ARL10Q8N8L6 244 aa22.28■■□□□ 1.16
NEDD4L-237ENST00000617539 ZNF564Q8TBZ8 553 aaPredicted RBP22.28■■□□□ 1.16
NEDD4L-237ENST00000617539 GLMNQ92990 594 aa22.28■■□□□ 1.16
NEDD4L-237ENST00000617539 NAT6Q93015 286 aa22.28■■□□□ 1.16
NEDD4L-237ENST00000617539 ATXN7L3BQ96GX2 97 aa22.28■■□□□ 1.16
NEDD4L-237ENST00000617539 HIC2Q96JB3 615 aa22.28■■□□□ 1.16
NEDD4L-237ENST00000617539 CCDC3Q9BQI4 270 aa22.28■■□□□ 1.16
NEDD4L-237ENST00000617539 POLR1BQ9H9Y6 1135 aa22.28■■□□□ 1.16
NEDD4L-237ENST00000617539 ASCL3Q9NQ33 180 aa22.28■■□□□ 1.16
NEDD4L-237ENST00000617539 MRPL40Q9NQ50 206 aaKnown RBP22.28■■□□□ 1.16
NEDD4L-237ENST00000617539 RCOR3Q9P2K3 495 aaPredicted RBP22.28■■□□□ 1.16
NEDD4L-237ENST00000617539 ENTPD2Q9Y5L3 495 aa22.28■■□□□ 1.16
NEDD4L-237ENST00000617539 RAI2Q9Y5P3 530 aa22.28■■□□□ 1.16
NEDD4L-237ENST00000617539 DGKBQ9Y6T7 804 aa22.28■■□□□ 1.16
NEDD4L-237ENST00000617539 PMS2P1A4D2B8 440 aa22.27■■□□□ 1.16
NEDD4L-237ENST00000617539 MYO1FO00160 1098 aa22.27■■□□□ 1.16
NEDD4L-237ENST00000617539 CPP00450 1065 aa22.27■■□□□ 1.16
NEDD4L-237ENST00000617539 CTSEP14091 401 aa22.27■■□□□ 1.16
NEDD4L-237ENST00000617539 SERPINB6P35237 376 aa22.27■■□□□ 1.16
NEDD4L-237ENST00000617539 MMP13P45452 471 aa22.27■■□□□ 1.16
NEDD4L-237ENST00000617539 ATMQ13315 3056 aa22.27■■□□□ 1.16
NEDD4L-237ENST00000617539 KRT81Q14533 505 aa22.27■■□□□ 1.16
NEDD4L-237ENST00000617539 IHHQ14623 411 aa22.27■■□□□ 1.16
NEDD4L-237ENST00000617539 ACOX1Q15067 660 aa22.27■■□□□ 1.16
NEDD4L-237ENST00000617539 NCBP2-AS2Q69YL0 99 aa22.27■■□□□ 1.16
NEDD4L-237ENST00000617539 PNCKQ6P2M8 343 aa22.27■■□□□ 1.16
NEDD4L-237ENST00000617539 RBM44Q6ZP01 1051 aaKnown RBP22.27■■□□□ 1.16
NEDD4L-237ENST00000617539 CBARPQ8N350 705 aaPredicted RBP22.27■■□□□ 1.16
NEDD4L-237ENST00000617539 TEX26Q8N6G2 289 aa22.27■■□□□ 1.16
NEDD4L-237ENST00000617539 OR56A4Q8NGH8 313 aa22.27■■□□□ 1.16
NEDD4L-237ENST00000617539 PDCD6IPQ8WUM4 868 aaKnown RBP22.27■■□□□ 1.16
NEDD4L-237ENST00000617539 PACSIN1Q9BY11 444 aa22.27■■□□□ 1.16
NEDD4L-237ENST00000617539 GULP1Q9UBP9 304 aa22.27■■□□□ 1.16
NEDD4L-237ENST00000617539 DOLKQ9UPQ8 538 aa22.27■■□□□ 1.16
NEDD4L-237ENST00000617539 KALRNO60229 2985 aa22.26■■□□□ 1.15
NEDD4L-237ENST00000617539 NPIPB15A6NHN6 443 aaPredicted RBP22.26■■□□□ 1.15
NEDD4L-237ENST00000617539 RRP8O43159 456 aaKnown RBP22.26■■□□□ 1.15
NEDD4L-237ENST00000617539 HEXIM1O94992 359 aaKnown RBP22.26■■□□□ 1.15
NEDD4L-237ENST00000617539 HOXC4P09017 264 aaPredicted RBP22.26■■□□□ 1.15
NEDD4L-237ENST00000617539 VIPR1P32241 457 aa22.26■■□□□ 1.15
NEDD4L-237ENST00000617539 TAS2R40P59535 323 aa22.26■■□□□ 1.15
NEDD4L-237ENST00000617539 CCDC173Q0VFZ6 552 aa22.26■■□□□ 1.15
NEDD4L-237ENST00000617539 MARC1Q5VT66 337 aa22.26■■□□□ 1.15
NEDD4L-237ENST00000617539 SFTPA2Q8IWL1 248 aa22.26■■□□□ 1.15
NEDD4L-237ENST00000617539 SDR16C5Q8N3Y7 309 aa22.26■■□□□ 1.15
NEDD4L-237ENST00000617539 ATL2Q8NHH9 583 aa22.26■■□□□ 1.15
NEDD4L-237ENST00000617539 TPCN2Q8NHX9 752 aa22.26■■□□□ 1.15
NEDD4L-237ENST00000617539 PRORYQ9H606 182 aa22.26■■□□□ 1.15
NEDD4L-237ENST00000617539 GPR34Q9UPC5 381 aa22.26■■□□□ 1.15
NEDD4L-237ENST00000617539 SATB2Q9UPW6 733 aa22.26■■□□□ 1.15
NEDD4L-237ENST00000617539 CACNB4O00305 520 aaPredicted RBP22.25■■□□□ 1.15
NEDD4L-237ENST00000617539 NTN3O00634 580 aaPredicted RBP22.25■■□□□ 1.15
NEDD4L-237ENST00000617539 TCEA3O75764 348 aa22.25■■□□□ 1.15
NEDD4L-237ENST00000617539 PGLSO95336 258 aa22.25■■□□□ 1.15
NEDD4L-237ENST00000617539 MAP3K6O95382 1288 aa22.25■■□□□ 1.15
NEDD4L-237ENST00000617539 TNFP01375 233 aa22.25■■□□□ 1.15
NEDD4L-237ENST00000617539 GJC1P36383 396 aa22.25■■□□□ 1.15
NEDD4L-237ENST00000617539 SSR1P43307 286 aaKnown RBP22.25■■□□□ 1.15
NEDD4L-237ENST00000617539 TLE3Q04726 772 aa22.25■■□□□ 1.15
NEDD4L-237ENST00000617539 GALNT2Q10471 571 aa22.25■■□□□ 1.15
NEDD4L-237ENST00000617539 PAFAH1B3Q15102 231 aaKnown RBP22.25■■□□□ 1.15
NEDD4L-237ENST00000617539 ASTE1Q2TB18 679 aaPredicted RBP22.25■■□□□ 1.15
NEDD4L-237ENST00000617539 C3orf38Q5JPI3 329 aa22.25■■□□□ 1.15
NEDD4L-237ENST00000617539 LRRC69Q6ZNQ3 347 aa22.25■■□□□ 1.15
NEDD4L-237ENST00000617539 HSD11B1LQ7Z5J1 315 aa22.25■■□□□ 1.15
NEDD4L-237ENST00000617539 TSPAN33Q86UF1 283 aa22.25■■□□□ 1.15
NEDD4L-237ENST00000617539 GKN2Q86XP6 184 aa22.25■■□□□ 1.15
NEDD4L-237ENST00000617539 SPACA3Q8IXA5 215 aa22.25■■□□□ 1.15
NEDD4L-237ENST00000617539 SCG3Q8WXD2 468 aaKnown RBP22.25■■□□□ 1.15
NEDD4L-237ENST00000617539 CCDC74AQ96AQ1 378 aa22.25■■□□□ 1.15
NEDD4L-237ENST00000617539 NUS1Q96E22 293 aa22.25■■□□□ 1.15
NEDD4L-237ENST00000617539 PRR11Q96HE9 360 aaPredicted RBP22.25■■□□□ 1.15
NEDD4L-237ENST00000617539 ZNF578Q96N58 590 aaPredicted RBP22.25■■□□□ 1.15
NEDD4L-237ENST00000617539 SMIM14Q96QK8 99 aa22.25■■□□□ 1.15
NEDD4L-237ENST00000617539 MCCC1Q96RQ3 725 aaPredicted RBP22.25■■□□□ 1.15
NEDD4L-237ENST00000617539 WDR26Q9H7D7 661 aa22.25■■□□□ 1.15
NEDD4L-237ENST00000617539 NT5MQ9NPB1 228 aa22.25■■□□□ 1.15
NEDD4L-237ENST00000617539 ARHGEF17Q96PE2 2063 aaPredicted RBP22.24■■□□□ 1.15
NEDD4L-237ENST00000617539 A0A0U1RQS6 177 aa22.24■■□□□ 1.15
NEDD4L-237ENST00000617539 A0A1W2PQ67 120 aa22.24■■□□□ 1.15
NEDD4L-237ENST00000617539 PROSCO94903 275 aa22.24■■□□□ 1.15
NEDD4L-237ENST00000617539 PDHA1P08559 390 aa22.24■■□□□ 1.15
NEDD4L-237ENST00000617539 ETV3P41162 512 aa22.24■■□□□ 1.15
NEDD4L-237ENST00000617539 GARSP41250 739 aaKnown RBP22.24■■□□□ 1.15
NEDD4L-237ENST00000617539 COL9A2Q14055 689 aaPredicted RBP22.24■■□□□ 1.15
NEDD4L-237ENST00000617539 RALGPS1Q5JS13 557 aa22.24■■□□□ 1.15
NEDD4L-237ENST00000617539 BBS5Q8N3I7 341 aa22.24■■□□□ 1.15
NEDD4L-237ENST00000617539 GPR156Q8NFN8 814 aa22.24■■□□□ 1.15
NEDD4L-237ENST00000617539 CCL4L1Q8NHW4 92 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms