RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 SLC7A4O43246 635 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 CAPN15O75808 1086 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 GATMP50440 423 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 CDH4P55283 916 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 SQLEQ14534 574 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 PKDCCQ504Y2 493 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 TBCELQ5QJ74 424 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 TIFABQ6ZNK6 161 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 LRRTM3Q86VH5 581 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 OLIG1Q8TAK6 271 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 GRIN3AQ8TCU5 1115 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 LINGO1Q96FE5 620 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 C8orf48Q96LL4 319 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 NMUR1Q9HB89 426 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 SPG21Q9NZD8 308 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 MYO18AQ92614 2054 aaKnown RBP13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 EVPLLA8MZ36 301 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 LZTS3O60299 673 aaPredicted RBP13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 ALDOAP04075 364 aaKnown RBP13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 ITGB1P05556 798 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 LINC00032P0C843 101 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 MZF1P28698 734 aaPredicted RBP13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 HK2P52789 917 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 ATP6V0D1P61421 351 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 RALGPS1Q5JS13 557 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 ISLR2Q6UXK2 745 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 MAGEC3Q8TD91 643 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 COL4A5P29400 1685 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 CCDC154A6NI56 674 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 FKBP9O95302 570 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 CES1P23141 567 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 SLC11A1P49279 550 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 MOGSQ13724 837 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 CLEC6AQ6EIG7 209 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 FKBP9P1Q75LS8 142 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 FAM126BQ8IXS8 530 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 SEPHS2Q99611 448 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 TRMOQ9BU70 441 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 FAM126AQ9BYI3 521 aaPredicted RBP13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 ATP13A3Q9H7F0 1226 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 OPTCQ9UBM4 332 aa13.22□□□□□ -0.29
PPP4R3B-206ENST00000616407 SAC3D1A6NKF1 404 aa13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 INSIG1O15503 277 aa13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 MAGEC1O60732 1142 aa13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 CYBAP13498 195 aa13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 PKMP14618 531 aaKnown RBP13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 SNRPD1P62314 119 aaKnown RBP13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 IRF5Q13568 498 aa13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 MS4A13Q5J8X5 152 aa13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 ZFP1Q6P2D0 407 aa13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 DNAJC14Q6Y2X3 702 aaPredicted RBP13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 GK5Q6ZS86 529 aa13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 PLD6Q8N2A8 252 aaKnown RBP13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 ARL14EPQ8N8R7 260 aaPredicted RBP13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 OR13C4Q8NGS5 318 aa13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 BRSK1Q8TDC3 778 aa13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 GPR21Q99679 349 aa13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 CCT7Q99832 543 aa13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 SEMA6AQ9H2E6 1030 aa13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 ADNPQ9H2P0 1102 aa13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 ASAH2Q9NR71 780 aa13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 MTMR10Q9NXD2 777 aa13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 CLIC5Q9NZA1 410 aa13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 ARL5AQ9Y689 179 aa13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 KRT6AP02538 564 aa13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 KRT6BP04259 564 aa13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 DLDP09622 509 aaKnown RBP13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 ZNF23P17027 643 aa13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 DGKAP23743 735 aa13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 GMPRP36959 345 aa13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 KRT6CP48668 564 aa13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 HSPA13P48723 471 aa13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 LINC01465Q8N7H1 131 aa13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 KCTD14Q9BQ13 255 aaPredicted RBP13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 SGIP1Q9BQI5 828 aa13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 RTKNQ9BST9 563 aa13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 SPATA16Q9BXB7 569 aa13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 DPY30Q9C005 99 aa13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 PARVBQ9HBI1 364 aa13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 NMRK1Q9NWW6 199 aa13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 RNF186Q9NXI6 227 aa13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 ARL15Q9NXU5 204 aa13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 SIRPGQ9P1W8 387 aa13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 EVLQ9UI08 416 aaPredicted RBP13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 COL11A2P13942 1736 aaPredicted RBP13.21□□□□□ -0.29
PPP4R3B-206ENST00000616407 HAS3O00219 553 aa13.21□□□□□ -0.3
PPP4R3B-206ENST00000616407 SEC22BO75396 215 aa13.21□□□□□ -0.3
PPP4R3B-206ENST00000616407 PSMC3P17980 439 aa13.21□□□□□ -0.3
PPP4R3B-206ENST00000616407 ALFQ53S48 1182 aa13.21□□□□□ -0.3
PPP4R3B-206ENST00000616407 CCDC149Q6ZUS6 474 aa13.21□□□□□ -0.3
PPP4R3B-206ENST00000616407 ADCK2Q7Z695 626 aa13.21□□□□□ -0.3
PPP4R3B-206ENST00000616407 PANX3Q96QZ0 392 aa13.21□□□□□ -0.3
PPP4R3B-206ENST00000616407 CFAP97Q9P2B7 532 aa13.21□□□□□ -0.3
PPP4R3B-206ENST00000616407 A0A1W2PQ45 241 aaPredicted RBP13.2□□□□□ -0.3
PPP4R3B-206ENST00000616407 A0A1W2PQY0 241 aa13.2□□□□□ -0.3
PPP4R3B-206ENST00000616407 CXCL14O95715 111 aa13.2□□□□□ -0.3
PPP4R3B-206ENST00000616407 PRKCGP05129 697 aa13.2□□□□□ -0.3
PPP4R3B-206ENST00000616407 SERPIND1P05546 499 aa13.2□□□□□ -0.3
PPP4R3B-206ENST00000616407 OR56A5P0C7T3 313 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms