RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 ARHGAP40Q5TG30 622 aa19.06■□□□□ 0.64
CDX1-202ENST00000616154 ENPP7Q6UWV6 458 aa19.06■□□□□ 0.64
CDX1-202ENST00000616154 CLEC14AQ86T13 490 aa19.06■□□□□ 0.64
CDX1-202ENST00000616154 ZSWIM9Q86XI8 627 aa19.06■□□□□ 0.64
CDX1-202ENST00000616154 ARHGAP12Q8IWW6 846 aa19.06■□□□□ 0.64
CDX1-202ENST00000616154 ARL14Q8N4G2 192 aa19.06■□□□□ 0.64
CDX1-202ENST00000616154 OR8K1Q8NGG5 319 aa19.06■□□□□ 0.64
CDX1-202ENST00000616154 ATL2Q8NHH9 583 aa19.06■□□□□ 0.64
CDX1-202ENST00000616154 PCDH19Q8TAB3 1148 aa19.06■□□□□ 0.64
CDX1-202ENST00000616154 TSACCQ96A04 125 aaPredicted RBP19.06■□□□□ 0.64
CDX1-202ENST00000616154 CCDC97Q96F63 343 aaPredicted RBP19.06■□□□□ 0.64
CDX1-202ENST00000616154 GULP1Q9UBP9 304 aa19.06■□□□□ 0.64
CDX1-202ENST00000616154 UNC13CQ8NB66 2214 aa19.06■□□□□ 0.64
CDX1-202ENST00000616154 SSU72P8A0A1W2PR75 194 aa19.05■□□□□ 0.64
CDX1-202ENST00000616154 CFAP69A5D8W1 941 aa19.05■□□□□ 0.64
CDX1-202ENST00000616154 ARHGAP42A6NI28 874 aa19.05■□□□□ 0.64
CDX1-202ENST00000616154 ERCC2P18074 760 aa19.05■□□□□ 0.64
CDX1-202ENST00000616154 SRP54P61011 504 aaKnown RBP19.05■□□□□ 0.64
CDX1-202ENST00000616154 VAC14Q08AM6 782 aa19.05■□□□□ 0.64
CDX1-202ENST00000616154 MTM1Q13496 603 aa19.05■□□□□ 0.64
CDX1-202ENST00000616154 GKN2Q86XP6 184 aa19.05■□□□□ 0.64
CDX1-202ENST00000616154 CAMK1DQ8IU85 385 aa19.05■□□□□ 0.64
CDX1-202ENST00000616154 TEKT4Q8WW24 435 aa19.05■□□□□ 0.64
CDX1-202ENST00000616154 CCDC74AQ96AQ1 378 aa19.05■□□□□ 0.64
CDX1-202ENST00000616154 LIN37Q96GY3 246 aaPredicted RBP19.05■□□□□ 0.64
CDX1-202ENST00000616154 CELF6Q96J87 481 aaKnown RBP19.05■□□□□ 0.64
CDX1-202ENST00000616154 WDR92Q96MX6 357 aa19.05■□□□□ 0.64
CDX1-202ENST00000616154 PANX2Q96RD6 677 aa19.05■□□□□ 0.64
CDX1-202ENST00000616154 SLC39A8Q9C0K1 460 aa19.05■□□□□ 0.64
CDX1-202ENST00000616154 SYNDIG1Q9H7V2 258 aa19.05■□□□□ 0.64
CDX1-202ENST00000616154 ABHD10Q9NUJ1 306 aa19.05■□□□□ 0.64
CDX1-202ENST00000616154 CWC15Q9P013 229 aaKnown RBP19.05■□□□□ 0.64
CDX1-202ENST00000616154 KLQ9UEF7 1012 aa19.05■□□□□ 0.64
CDX1-202ENST00000616154 IP6K2Q9UHH9 426 aa19.05■□□□□ 0.64
CDX1-202ENST00000616154 OR1A2Q9Y585 309 aa19.05■□□□□ 0.64
CDX1-202ENST00000616154 SCN8AQ9UQD0 1980 aa19.05■□□□□ 0.64
CDX1-202ENST00000616154 SETXQ7Z333 2677 aaKnown RBP19.05■□□□□ 0.64
CDX1-202ENST00000616154 CAPN8A6NHC0 703 aa19.04■□□□□ 0.64
CDX1-202ENST00000616154 PCCBP05166 539 aa19.04■□□□□ 0.64
CDX1-202ENST00000616154 TCF4P15884 667 aa19.04■□□□□ 0.64
CDX1-202ENST00000616154 SERPINA4P29622 427 aa19.04■□□□□ 0.64
CDX1-202ENST00000616154 RGRP47804 291 aa19.04■□□□□ 0.64
CDX1-202ENST00000616154 PAPOLAP51003 745 aaKnown RBP19.04■□□□□ 0.64
CDX1-202ENST00000616154 SLC25A11Q02978 314 aaKnown RBP19.04■□□□□ 0.64
CDX1-202ENST00000616154 SLC18A3Q16572 532 aa19.04■□□□□ 0.64
CDX1-202ENST00000616154 TAF1BQ53T94 588 aaPredicted RBP19.04■□□□□ 0.64
CDX1-202ENST00000616154 CCDC122Q5T0U0 273 aa19.04■□□□□ 0.64
CDX1-202ENST00000616154 FOXR1Q6PIV2 292 aa19.04■□□□□ 0.64
CDX1-202ENST00000616154 SRLQ86TD4 932 aa19.04■□□□□ 0.64
CDX1-202ENST00000616154 LZTR1Q8N653 840 aa19.04■□□□□ 0.64
CDX1-202ENST00000616154 NPWQ8N729 165 aa19.04■□□□□ 0.64
CDX1-202ENST00000616154 NUP85Q9BW27 656 aa19.04■□□□□ 0.64
CDX1-202ENST00000616154 ATP13A3Q9H7F0 1226 aa19.04■□□□□ 0.64
CDX1-202ENST00000616154 SIRPGQ9P1W8 387 aa19.04■□□□□ 0.64
CDX1-202ENST00000616154 RABGEF1Q9UJ41 708 aa19.04■□□□□ 0.64
CDX1-202ENST00000616154 GPR34Q9UPC5 381 aa19.04■□□□□ 0.64
CDX1-202ENST00000616154 DGKBQ9Y6T7 804 aa19.04■□□□□ 0.64
CDX1-202ENST00000616154 AHCTF1Q8WYP5 2266 aa19.04■□□□□ 0.64
CDX1-202ENST00000616154 FLNBO75369 2602 aaKnown RBP19.04■□□□□ 0.64
CDX1-202ENST00000616154 TNFSF15O95150 251 aa19.03■□□□□ 0.64
CDX1-202ENST00000616154 PRKCGP05129 697 aa19.03■□□□□ 0.64
CDX1-202ENST00000616154 ITGA2BP08514 1039 aa19.03■□□□□ 0.64
CDX1-202ENST00000616154 PLA2G2AP14555 144 aa19.03■□□□□ 0.64
CDX1-202ENST00000616154 KIAA1024LP59773 190 aa19.03■□□□□ 0.64
CDX1-202ENST00000616154 RALGDSQ12967 914 aa19.03■□□□□ 0.64
CDX1-202ENST00000616154 TCEA2Q15560 299 aa19.03■□□□□ 0.64
CDX1-202ENST00000616154 NYAP1Q6ZVC0 841 aa19.03■□□□□ 0.64
CDX1-202ENST00000616154 RD3Q7Z3Z2 195 aa19.03■□□□□ 0.64
CDX1-202ENST00000616154 POLNQ7Z5Q5 900 aa19.03■□□□□ 0.64
CDX1-202ENST00000616154 TSEN2Q8NCE0 465 aaKnown RBP19.03■□□□□ 0.64
CDX1-202ENST00000616154 OR6C4Q8NGE1 309 aa19.03■□□□□ 0.64
CDX1-202ENST00000616154 FAM71BQ8TC56 605 aa19.03■□□□□ 0.64
CDX1-202ENST00000616154 ECHDC3Q96DC8 303 aa19.03■□□□□ 0.64
CDX1-202ENST00000616154 PDXPQ96GD0 296 aa19.03■□□□□ 0.64
CDX1-202ENST00000616154 RBM15Q96T37 977 aaKnown RBP eCLIP19.03■□□□□ 0.64
CDX1-202ENST00000616154 ZWILCHQ9H900 591 aa19.03■□□□□ 0.64
CDX1-202ENST00000616154 ANAPC7Q9UJX3 599 aa19.03■□□□□ 0.64
CDX1-202ENST00000616154 ARHGEF17Q96PE2 2063 aaPredicted RBP19.03■□□□□ 0.64
CDX1-202ENST00000616154 GOLGA6L6A8MZA4 724 aa19.02■□□□□ 0.64
CDX1-202ENST00000616154 D6RAR5 112 aa19.02■□□□□ 0.64
CDX1-202ENST00000616154 TMX2-CTNND1H3BSU7 103 aa19.02■□□□□ 0.64
CDX1-202ENST00000616154 PALMO75781 387 aa19.02■□□□□ 0.64
CDX1-202ENST00000616154 TNFP01375 233 aa19.02■□□□□ 0.64
CDX1-202ENST00000616154 RARAP10276 462 aa19.02■□□□□ 0.64
CDX1-202ENST00000616154 EIF3IQ13347 325 aaKnown RBP19.02■□□□□ 0.64
CDX1-202ENST00000616154 RFTN1Q14699 578 aaPredicted RBP19.02■□□□□ 0.64
CDX1-202ENST00000616154 PPP6R3Q5H9R7 873 aaPredicted RBP19.02■□□□□ 0.64
CDX1-202ENST00000616154 KCTD16Q68DU8 428 aa19.02■□□□□ 0.64
CDX1-202ENST00000616154 B3GNT8Q7Z7M8 397 aa19.02■□□□□ 0.64
CDX1-202ENST00000616154 ZNF605Q86T29 641 aa19.02■□□□□ 0.64
CDX1-202ENST00000616154 PLA2G15Q8NCC3 412 aa19.02■□□□□ 0.64
CDX1-202ENST00000616154 TTC9Q92623 222 aa19.02■□□□□ 0.64
CDX1-202ENST00000616154 GFM1Q96RP9 751 aaKnown RBP19.02■□□□□ 0.64
CDX1-202ENST00000616154 CINPQ9BW66 212 aaPredicted RBP19.02■□□□□ 0.64
CDX1-202ENST00000616154 SP110Q9HB58 689 aa19.02■□□□□ 0.64
CDX1-202ENST00000616154 UVRAGQ9P2Y5 699 aa19.02■□□□□ 0.64
CDX1-202ENST00000616154 H3BRJ5 948 aa19.01■□□□□ 0.63
CDX1-202ENST00000616154 K7ENP7 123 aa19.01■□□□□ 0.63
CDX1-202ENST00000616154 MYO1FO00160 1098 aa19.01■□□□□ 0.63
CDX1-202ENST00000616154 PLD2O14939 933 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms