RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 TUBBP07437 444 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 HLA-DPA1P20036 260 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 NTSR1P30989 418 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 ABL2P42684 1182 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 TNNT3P45378 269 aaPredicted RBP8.07□□□□□ -1.12
PCDH9-205ENST00000614931 MAPK8P45983 427 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 RECQLP46063 649 aaPredicted RBP8.07□□□□□ -1.12
PCDH9-205ENST00000614931 COPAP53621 1224 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 PMS2P54278 862 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 PTPRCAPQ14761 206 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 POU6F1Q14863 301 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 KYNUQ16719 465 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 PLK5Q496M5 336 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 DNAJC21Q5F1R6 531 aaKnown RBP8.07□□□□□ -1.12
PCDH9-205ENST00000614931 EOGTQ5NDL2 527 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 ARMC12Q5T9G4 340 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 STEAP4Q687X5 459 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 CES3Q6UWW8 571 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 GDPD4Q6W3E5 623 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 CAPN12Q6ZSI9 719 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 NUDT18Q6ZVK8 323 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 CENPUQ71F23 418 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 PARS2Q7L3T8 475 aaKnown RBP8.07□□□□□ -1.12
PCDH9-205ENST00000614931 LINC00523Q86TU6 105 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 CACUL1Q86Y37 369 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 RELL1Q8IUW5 271 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 CHPFQ8IZ52 775 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 UNC5BQ8IZJ1 945 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 PDIK1LQ8N165 341 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 TTC30BQ8N4P2 665 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 MREGQ8N565 214 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 DNAAF3Q8N9W5 541 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 MDGA1Q8NFP4 955 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 UHMK1Q8TAS1 419 aaKnown RBP8.07□□□□□ -1.12
PCDH9-205ENST00000614931 PIP4K2CQ8TBX8 421 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 HNRNPLLQ8WVV9 542 aaKnown RBP8.07□□□□□ -1.12
PCDH9-205ENST00000614931 OR8D1Q8WZ84 308 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 ZBTB9Q96C00 473 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 IFT43Q96FT9 208 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 CFAP36Q96G28 342 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 FCRL3Q96P31 734 aaPredicted RBP8.07□□□□□ -1.12
PCDH9-205ENST00000614931 EBNA1BP2Q99848 306 aaKnown RBP8.07□□□□□ -1.12
PCDH9-205ENST00000614931 FRMD8Q9BZ67 464 aaPredicted RBP8.07□□□□□ -1.12
PCDH9-205ENST00000614931 DUSP15Q9H1R2 295 aaPredicted RBP8.07□□□□□ -1.12
PCDH9-205ENST00000614931 HAUS2Q9NVX0 235 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 ZNF446Q9NWS9 450 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 SLC2A6Q9UGQ3 507 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 SUN2Q9UH99 717 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 PPM1HQ9ULR3 514 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 SOX13Q9UN79 622 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 TCAF1Q9Y4C2 921 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 PCDHB9Q9Y5E1 797 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 CEP192Q8TEP8 1941 aa8.07□□□□□ -1.12
PCDH9-205ENST00000614931 GPR179Q6PRD1 2367 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 DCHS1Q96JQ0 3298 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 PIKFYVEQ9Y2I7 2098 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 EP300Q09472 2414 aaPredicted RBP8.06□□□□□ -1.12
PCDH9-205ENST00000614931 A0A0J9YYE9 177 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 NPIPB15A6NHN6 443 aaPredicted RBP8.06□□□□□ -1.12
PCDH9-205ENST00000614931 ANKRD66B4E2M5 251 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 KPNA3O00505 521 aaPredicted RBP8.06□□□□□ -1.12
PCDH9-205ENST00000614931 CCL22O00626 93 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 DYNC1I1O14576 645 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 RIPK2O43353 540 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 LDB2O43679 373 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 BUD23O43709 281 aaKnown RBP8.06□□□□□ -1.12
PCDH9-205ENST00000614931 ERLIN1O75477 346 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 ACSL3O95573 720 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 EPOP01588 193 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 TRBC1P01850 177 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 ZNF806P0C7X5 589 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 HOXB2P14652 356 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 TIMP2P16035 220 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 NMBRP28336 390 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 SERPINA4P29622 427 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 SSTR1P30872 391 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 HSD17B3P37058 310 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 PSMD8P48556 350 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 NPY2RP49146 381 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 RPS14P62263 151 aaKnown RBP8.06□□□□□ -1.12
PCDH9-205ENST00000614931 SARNPP82979 210 aaKnown RBP8.06□□□□□ -1.12
PCDH9-205ENST00000614931 RAD51Q06609 339 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 SEPT6Q14141 434 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 SLMAPQ14BN4 828 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 EFTUD2Q15029 972 aaKnown RBP eCLIP8.06□□□□□ -1.12
PCDH9-205ENST00000614931 SMAD1Q15797 465 aaKnown RBP8.06□□□□□ -1.12
PCDH9-205ENST00000614931 CDKN3Q16667 212 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 MAP9Q49MG5 647 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 USP39Q53GS9 565 aaKnown RBP8.06□□□□□ -1.12
PCDH9-205ENST00000614931 PLA2G2CQ5R387 149 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 ANO7Q6IWH7 933 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 TRMT10BQ6PF06 316 aaKnown RBP8.06□□□□□ -1.12
PCDH9-205ENST00000614931 UNC5AQ6ZN44 842 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 PRR23CQ6ZRP0 262 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 DGLUCYQ7Z3D6 616 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 TRMT11Q7Z4G4 463 aaKnown RBP8.06□□□□□ -1.12
PCDH9-205ENST00000614931 TSPAN33Q86UF1 283 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 MMAAQ8IVH4 418 aaKnown RBP8.06□□□□□ -1.12
PCDH9-205ENST00000614931 TMIEQ8NEW7 156 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 BLOC1S5Q8TDH9 187 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms