RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 PIRTP0C851 137 aa5.03□□□□□ -1.6
SYCP1-209ENST00000613524 ADRA1BP35368 520 aa5.03□□□□□ -1.6
SYCP1-209ENST00000613524 CCR3P51677 355 aa5.03□□□□□ -1.6
SYCP1-209ENST00000613524 TAS2R40P59535 323 aa5.03□□□□□ -1.6
SYCP1-209ENST00000613524 ECT2LQ008S8 904 aa5.03□□□□□ -1.6
SYCP1-209ENST00000613524 CTBSQ01459 385 aa5.03□□□□□ -1.6
SYCP1-209ENST00000613524 ACAP2Q15057 778 aa5.03□□□□□ -1.6
SYCP1-209ENST00000613524 LVRNQ6Q4G3 990 aa5.03□□□□□ -1.6
SYCP1-209ENST00000613524 NPNTQ6UXI9 565 aa5.03□□□□□ -1.6
SYCP1-209ENST00000613524 RD3Q7Z3Z2 195 aa5.03□□□□□ -1.6
SYCP1-209ENST00000613524 ZC3H18Q86VM9 953 aaKnown RBP5.03□□□□□ -1.6
SYCP1-209ENST00000613524 C3orf20Q8ND61 904 aa5.03□□□□□ -1.6
SYCP1-209ENST00000613524 SLC35G2Q8TBE7 412 aa5.03□□□□□ -1.6
SYCP1-209ENST00000613524 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.03□□□□□ -1.6
SYCP1-209ENST00000613524 NAT14Q8WUY8 206 aa5.03□□□□□ -1.6
SYCP1-209ENST00000613524 PRCCQ92733 491 aaPredicted RBP5.03□□□□□ -1.6
SYCP1-209ENST00000613524 SCYL1Q96KG9 808 aa5.03□□□□□ -1.6
SYCP1-209ENST00000613524 CDK5RAP1Q96SZ6 601 aaKnown RBP5.03□□□□□ -1.6
SYCP1-209ENST00000613524 NPY6RQ99463 290 aa5.03□□□□□ -1.6
SYCP1-209ENST00000613524 WRAP53Q9BUR4 548 aaKnown RBP5.03□□□□□ -1.6
SYCP1-209ENST00000613524 TRPV4Q9HBA0 871 aa5.03□□□□□ -1.6
SYCP1-209ENST00000613524 FBXL12Q9NXK8 326 aa5.03□□□□□ -1.6
SYCP1-209ENST00000613524 SMARCAL1Q9NZC9 954 aa5.03□□□□□ -1.6
SYCP1-209ENST00000613524 EVLQ9UI08 416 aaPredicted RBP5.03□□□□□ -1.6
SYCP1-209ENST00000613524 SMG5Q9UPR3 1016 aaKnown RBP5.03□□□□□ -1.6
SYCP1-209ENST00000613524 CNTN6Q9UQ52 1028 aa5.03□□□□□ -1.6
SYCP1-209ENST00000613524 JRKLQ9Y4A0 524 aa5.03□□□□□ -1.6
SYCP1-209ENST00000613524 DENND4CQ5VZ89 1909 aa5.03□□□□□ -1.6
SYCP1-209ENST00000613524 PCNX2A6NKB5 2137 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 ATXN7O15265 892 aaPredicted RBP5.02□□□□□ -1.61
SYCP1-209ENST00000613524 CAPN5O15484 640 aaPredicted RBP5.02□□□□□ -1.61
SYCP1-209ENST00000613524 RAMP2O60895 175 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 PIGNO95427 931 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 LSM8O95777 96 aaKnown RBP5.02□□□□□ -1.61
SYCP1-209ENST00000613524 GABRG2P18507 467 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 CXCR5P32302 372 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 CSNK1EP49674 416 aaKnown RBP5.02□□□□□ -1.61
SYCP1-209ENST00000613524 SCNN1BP51168 640 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 MRPS25P82663 173 aaKnown RBP5.02□□□□□ -1.61
SYCP1-209ENST00000613524 POLD3Q15054 466 aaPredicted RBP5.02□□□□□ -1.61
SYCP1-209ENST00000613524 PCSK7Q16549 785 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 ASTE1Q2TB18 679 aaPredicted RBP5.02□□□□□ -1.61
SYCP1-209ENST00000613524 AASDHQ4L235 1098 aaPredicted RBP5.02□□□□□ -1.61
SYCP1-209ENST00000613524 TTMPQ5BVD1 217 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 Q6ZNB5 142 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 RTL10Q7L3V2 364 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 SPEM1Q8N4L4 309 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 TTC30BQ8N4P2 665 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 HDDC3Q8N4P3 179 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 TMEM102Q8N9M5 508 aaPredicted RBP5.02□□□□□ -1.61
SYCP1-209ENST00000613524 FAM156AQ8NDB6 213 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 SPATA4Q8NEY3 305 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 OVCA2Q8WZ82 227 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 RUBCNQ92622 972 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 HMCESQ96FZ2 354 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 NELL2Q99435 816 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 NCAPGQ9BPX3 1015 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 SYNDIG1Q9H7V2 258 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 IL37Q9NZH6 218 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 PPARGC1AQ9UBK2 798 aaKnown RBP5.02□□□□□ -1.61
SYCP1-209ENST00000613524 VPS51Q9UID3 782 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 TMEFF2Q9UIK5 374 aaPredicted RBP5.02□□□□□ -1.61
SYCP1-209ENST00000613524 TMEM59LQ9UK28 342 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 SARDHQ9UL12 918 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 POLHQ9Y253 713 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 PCDHA13Q9Y5I0 950 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 DENND4AQ7Z401 1863 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 A6NCN8 305 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 TPP1O14773 563 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 CACNG3O60359 315 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 LRCH4O75427 683 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 ALDH1A2O94788 518 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 DNTTP04053 509 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 KRT1P04264 644 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 PYGLP06737 847 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 DLDP09622 509 aaKnown RBP5.02□□□□□ -1.61
SYCP1-209ENST00000613524 ARAFP10398 606 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 MYF5P13349 255 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 XPAP23025 273 aaPredicted RBP5.02□□□□□ -1.61
SYCP1-209ENST00000613524 CTNNA2P26232 953 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 OXCT1P55809 520 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 KIF5AQ12840 1032 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 ZNF268Q14587 947 aaPredicted RBP5.02□□□□□ -1.61
SYCP1-209ENST00000613524 PDCD1Q15116 288 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 TTC31Q49AM3 519 aaPredicted RBP5.02□□□□□ -1.61
SYCP1-209ENST00000613524 USP39Q53GS9 565 aaKnown RBP5.02□□□□□ -1.61
SYCP1-209ENST00000613524 DNAJC21Q5F1R6 531 aaKnown RBP5.02□□□□□ -1.61
SYCP1-209ENST00000613524 TRIM72Q6ZMU5 477 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 C8orf86Q6ZUL3 223 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 ADIPOR2Q86V24 386 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 RFX6Q8HWS3 928 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 C12orf50Q8NA57 414 aaPredicted RBP5.02□□□□□ -1.61
SYCP1-209ENST00000613524 TRIM58Q8NG06 486 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 FAM76AQ8TAV0 307 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 IRGQQ8WZA9 623 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 MRGPRX1Q96LB2 322 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 OSBPL9Q96SU4 736 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 FEM1AQ9BSK4 669 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 CNPY3Q9BT09 278 aa5.02□□□□□ -1.61
SYCP1-209ENST00000613524 DDX23Q9BUQ8 820 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms