RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 BTNL10A8MVZ5 291 aa12.7□□□□□ -0.38
CSTF1-208ENST00000613138 CASC3O15234 703 aaKnown RBP12.7□□□□□ -0.38
CSTF1-208ENST00000613138 SIGLEC6O43699 453 aa12.7□□□□□ -0.38
CSTF1-208ENST00000613138 GCATO75600 419 aa12.7□□□□□ -0.38
CSTF1-208ENST00000613138 HEXIM1O94992 359 aaKnown RBP12.7□□□□□ -0.38
CSTF1-208ENST00000613138 ZRANB2O95218 330 aaKnown RBP eCLIP12.7□□□□□ -0.38
CSTF1-208ENST00000613138 MT-CYBP00156 380 aaPredicted RBP12.7□□□□□ -0.38
CSTF1-208ENST00000613138 PIRTP0C851 137 aa12.7□□□□□ -0.38
CSTF1-208ENST00000613138 PYGMP11217 842 aa12.7□□□□□ -0.38
CSTF1-208ENST00000613138 MX2P20592 715 aa12.7□□□□□ -0.38
CSTF1-208ENST00000613138 PTPN3P26045 913 aa12.7□□□□□ -0.38
CSTF1-208ENST00000613138 VIPR1P32241 457 aa12.7□□□□□ -0.38
CSTF1-208ENST00000613138 CD68P34810 354 aaPredicted RBP12.7□□□□□ -0.38
CSTF1-208ENST00000613138 CTNNA1P35221 906 aaKnown RBP12.7□□□□□ -0.38
CSTF1-208ENST00000613138 HNF1BP35680 557 aa12.7□□□□□ -0.38
CSTF1-208ENST00000613138 ETV3P41162 512 aa12.7□□□□□ -0.38
CSTF1-208ENST00000613138 GRK6P43250 576 aa12.7□□□□□ -0.38
CSTF1-208ENST00000613138 RABIFP47224 123 aa12.7□□□□□ -0.38
CSTF1-208ENST00000613138 ARRB1P49407 418 aaPredicted RBP12.7□□□□□ -0.38
CSTF1-208ENST00000613138 PEX5P50542 639 aa12.7□□□□□ -0.38
CSTF1-208ENST00000613138 IFI35P80217 286 aaPredicted RBP12.7□□□□□ -0.38
CSTF1-208ENST00000613138 OVGP1Q12889 678 aa12.7□□□□□ -0.38
CSTF1-208ENST00000613138 GALNT3Q14435 633 aa12.7□□□□□ -0.38
CSTF1-208ENST00000613138 SUZ12Q15022 739 aaKnown RBP12.7□□□□□ -0.38
CSTF1-208ENST00000613138 PRKD1Q15139 912 aaPredicted RBP12.7□□□□□ -0.38
CSTF1-208ENST00000613138 NOMO1Q15155 1222 aa12.7□□□□□ -0.38
CSTF1-208ENST00000613138 TFDP3Q5H9I0 405 aa12.7□□□□□ -0.38
CSTF1-208ENST00000613138 ARMC12Q5T9G4 340 aa12.7□□□□□ -0.38
CSTF1-208ENST00000613138 VSIG1Q86XK7 387 aa12.7□□□□□ -0.38
CSTF1-208ENST00000613138 LRRC49Q8IUZ0 686 aa12.7□□□□□ -0.38
CSTF1-208ENST00000613138 DENND6BQ8NEG7 585 aa12.7□□□□□ -0.38
CSTF1-208ENST00000613138 LPCAT1Q8NF37 534 aa12.7□□□□□ -0.38
CSTF1-208ENST00000613138 PTCD2Q8WV60 388 aaKnown RBP12.7□□□□□ -0.38
CSTF1-208ENST00000613138 ASB12Q8WXK4 309 aa12.7□□□□□ -0.38
CSTF1-208ENST00000613138 TSACCQ96A04 125 aaPredicted RBP12.7□□□□□ -0.38
CSTF1-208ENST00000613138 CNDP2Q96KP4 475 aaKnown RBP12.7□□□□□ -0.38
CSTF1-208ENST00000613138 COQ10AQ96MF6 247 aa12.7□□□□□ -0.38
CSTF1-208ENST00000613138 LGR4Q9BXB1 951 aa12.7□□□□□ -0.38
CSTF1-208ENST00000613138 TDRD1Q9BXT4 1180 aaKnown RBP12.7□□□□□ -0.38
CSTF1-208ENST00000613138 LUC7LQ9NQ29 371 aaKnown RBP12.7□□□□□ -0.38
CSTF1-208ENST00000613138 ADGRG1Q9Y653 693 aa12.7□□□□□ -0.38
CSTF1-208ENST00000613138 KIF26BQ2KJY2 2108 aa12.7□□□□□ -0.38
CSTF1-208ENST00000613138 FAM149AA5PLN7 773 aa12.69□□□□□ -0.38
CSTF1-208ENST00000613138 DDX3YO15523 660 aaKnown RBP12.69□□□□□ -0.38
CSTF1-208ENST00000613138 MAGEC1O60732 1142 aa12.69□□□□□ -0.38
CSTF1-208ENST00000613138 IPO7O95373 1038 aaKnown RBP12.69□□□□□ -0.38
CSTF1-208ENST00000613138 C1SP09871 688 aa12.69□□□□□ -0.38
CSTF1-208ENST00000613138 JUNDP17535 347 aa12.69□□□□□ -0.38
CSTF1-208ENST00000613138 CTNNA2P26232 953 aa12.69□□□□□ -0.38
CSTF1-208ENST00000613138 WASHC5Q12768 1159 aa12.69□□□□□ -0.38
CSTF1-208ENST00000613138 PDK1Q15118 436 aa12.69□□□□□ -0.38
CSTF1-208ENST00000613138 PCSK7Q16549 785 aa12.69□□□□□ -0.38
CSTF1-208ENST00000613138 LRRC66Q68CR7 880 aa12.69□□□□□ -0.38
CSTF1-208ENST00000613138 CRTC1Q6UUV9 634 aa12.69□□□□□ -0.38
CSTF1-208ENST00000613138 Q6ZVL8 140 aa12.69□□□□□ -0.38
CSTF1-208ENST00000613138 RD3Q7Z3Z2 195 aa12.69□□□□□ -0.38
CSTF1-208ENST00000613138 ZSCAN30Q86W11 494 aa12.69□□□□□ -0.38
CSTF1-208ENST00000613138 RCOR2Q8IZ40 523 aa12.69□□□□□ -0.38
CSTF1-208ENST00000613138 ZNF548Q8NEK5 533 aaPredicted RBP12.69□□□□□ -0.38
CSTF1-208ENST00000613138 EXD1Q8NHP7 514 aa12.69□□□□□ -0.38
CSTF1-208ENST00000613138 KIAA1524Q8TCG1 905 aa12.69□□□□□ -0.38
CSTF1-208ENST00000613138 FATE1Q969F0 183 aa12.69□□□□□ -0.38
CSTF1-208ENST00000613138 MCCC1Q96RQ3 725 aaPredicted RBP12.69□□□□□ -0.38
CSTF1-208ENST00000613138 AGAP2Q99490 1192 aa12.69□□□□□ -0.38
CSTF1-208ENST00000613138 APOOQ9BUR5 198 aa12.69□□□□□ -0.38
CSTF1-208ENST00000613138 CLPBQ9H078 707 aa12.69□□□□□ -0.38
CSTF1-208ENST00000613138 SUDS3Q9H7L9 328 aaPredicted RBP12.69□□□□□ -0.38
CSTF1-208ENST00000613138 MRPL40Q9NQ50 206 aaKnown RBP12.69□□□□□ -0.38
CSTF1-208ENST00000613138 FTSJ1Q9UET6 329 aa12.69□□□□□ -0.38
CSTF1-208ENST00000613138 PHTF1Q9UMS5 762 aa12.69□□□□□ -0.38
CSTF1-208ENST00000613138 PCDHA3Q9Y5H8 950 aa12.69□□□□□ -0.38
CSTF1-208ENST00000613138 COL27A1Q8IZC6 1860 aaPredicted RBP12.68□□□□□ -0.38
CSTF1-208ENST00000613138 LY6G6EA0A0G2JKS1 128 aa12.68□□□□□ -0.38
CSTF1-208ENST00000613138 A0A0J9YYE9 177 aa12.68□□□□□ -0.38
CSTF1-208ENST00000613138 TCRBV7S2A1N4TA0A589 114 aa12.68□□□□□ -0.38
CSTF1-208ENST00000613138 TMEM202A6NGA9 273 aa12.68□□□□□ -0.38
CSTF1-208ENST00000613138 ENC1O14682 589 aa12.68□□□□□ -0.38
CSTF1-208ENST00000613138 CLDN7O95471 211 aa12.68□□□□□ -0.38
CSTF1-208ENST00000613138 LDOC1O95751 146 aaPredicted RBP12.68□□□□□ -0.38
CSTF1-208ENST00000613138 TRBC1P01850 177 aa12.68□□□□□ -0.38
CSTF1-208ENST00000613138 CSF2P04141 144 aa12.68□□□□□ -0.38
CSTF1-208ENST00000613138 NME1P15531 152 aaKnown RBP12.68□□□□□ -0.38
CSTF1-208ENST00000613138 ZFXP17010 805 aaPredicted RBP12.68□□□□□ -0.38
CSTF1-208ENST00000613138 SUOXP51687 545 aa12.68□□□□□ -0.38
CSTF1-208ENST00000613138 THOP1P52888 689 aa12.68□□□□□ -0.38
CSTF1-208ENST00000613138 POLR2LP62875 67 aaKnown RBP12.68□□□□□ -0.38
CSTF1-208ENST00000613138 PTSQ03393 145 aa12.68□□□□□ -0.38
CSTF1-208ENST00000613138 OLIG2Q13516 323 aa12.68□□□□□ -0.38
CSTF1-208ENST00000613138 QPCTQ16769 361 aa12.68□□□□□ -0.38
CSTF1-208ENST00000613138 KCTD19Q17RG1 926 aaPredicted RBP12.68□□□□□ -0.38
CSTF1-208ENST00000613138 ALG11Q2TAA5 492 aa12.68□□□□□ -0.38
CSTF1-208ENST00000613138 DEFB133Q30KQ1 61 aa12.68□□□□□ -0.38
CSTF1-208ENST00000613138 ENPP7Q6UWV6 458 aa12.68□□□□□ -0.38
CSTF1-208ENST00000613138 DHRS13Q6UX07 377 aa12.68□□□□□ -0.38
CSTF1-208ENST00000613138 BBS12Q6ZW61 710 aa12.68□□□□□ -0.38
CSTF1-208ENST00000613138 RAB44Q7Z6P3 723 aaPredicted RBP12.68□□□□□ -0.38
CSTF1-208ENST00000613138 GLRX5Q86SX6 157 aa12.68□□□□□ -0.38
CSTF1-208ENST00000613138 PARGQ86W56 976 aa12.68□□□□□ -0.38
CSTF1-208ENST00000613138 HID1Q8IV36 788 aa12.68□□□□□ -0.38
CSTF1-208ENST00000613138 SFTPA2Q8IWL1 248 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms