RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 SPATA13Q96N96 652 aa8.79□□□□□ -1
TTC28-208ENST00000612946 DPAGT1Q9H3H5 408 aa8.79□□□□□ -1
TTC28-208ENST00000612946 ATXN3LQ9H3M9 355 aa8.79□□□□□ -1
TTC28-208ENST00000612946 ADORA2BP29275 332 aa8.79□□□□□ -1
TTC28-208ENST00000612946 CYP2C18P33260 490 aa8.79□□□□□ -1
TTC28-208ENST00000612946 FSTL1Q12841 308 aa8.79□□□□□ -1
TTC28-208ENST00000612946 LYPLAL1Q5VWZ2 237 aa8.79□□□□□ -1
TTC28-208ENST00000612946 NT5DC4Q86YG4 428 aa8.79□□□□□ -1
TTC28-208ENST00000612946 PURBQ96QR8 312 aaKnown RBP8.79□□□□□ -1
TTC28-208ENST00000612946 DLGAP1O14490 977 aa8.79□□□□□ -1
TTC28-208ENST00000612946 IFNA6P05013 189 aa8.79□□□□□ -1
TTC28-208ENST00000612946 CD44P16070 742 aaKnown RBP8.79□□□□□ -1
TTC28-208ENST00000612946 YWHAQP27348 245 aa8.79□□□□□ -1
TTC28-208ENST00000612946 GPC1P35052 558 aa8.79□□□□□ -1
TTC28-208ENST00000612946 GRSF1Q12849 480 aaKnown RBP eCLIP8.79□□□□□ -1
TTC28-208ENST00000612946 PTP4A2Q12974 167 aa8.79□□□□□ -1
TTC28-208ENST00000612946 DPYSL3Q14195 570 aa8.79□□□□□ -1
TTC28-208ENST00000612946 RFTN1Q14699 578 aaPredicted RBP8.79□□□□□ -1
TTC28-208ENST00000612946 ZNF404Q494X3 552 aa8.79□□□□□ -1
TTC28-208ENST00000612946 ZRANB3Q5FWF4 1079 aa8.79□□□□□ -1
TTC28-208ENST00000612946 ADGRF4Q8IZF3 695 aa8.79□□□□□ -1
TTC28-208ENST00000612946 SLITRK1Q96PX8 696 aa8.79□□□□□ -1
TTC28-208ENST00000612946 SLC4A9Q96Q91 983 aa8.79□□□□□ -1
TTC28-208ENST00000612946 RERGLQ9H628 205 aa8.79□□□□□ -1
TTC28-208ENST00000612946 FOLH1BQ9HBA9 442 aa8.79□□□□□ -1
TTC28-208ENST00000612946 ZNF70Q9UC06 446 aaPredicted RBP8.79□□□□□ -1
TTC28-208ENST00000612946 NR2E1Q9Y466 385 aa8.79□□□□□ -1
TTC28-208ENST00000612946 NUP214P35658 2090 aaPredicted RBP8.79□□□□□ -1
TTC28-208ENST00000612946 A0A1B0GVC2 190 aa8.79□□□□□ -1
TTC28-208ENST00000612946 SLITRK5O94991 958 aa8.79□□□□□ -1
TTC28-208ENST00000612946 CAMK2GQ13555 558 aaPredicted RBP8.79□□□□□ -1
TTC28-208ENST00000612946 SSX2Q16385 188 aa8.79□□□□□ -1
TTC28-208ENST00000612946 TPRG1LQ5T0D9 272 aa8.79□□□□□ -1
TTC28-208ENST00000612946 CCDC71Q8IV32 467 aaPredicted RBP8.79□□□□□ -1
TTC28-208ENST00000612946 GLB1L3Q8NCI6 653 aaPredicted RBP8.79□□□□□ -1
TTC28-208ENST00000612946 TRNT1Q96Q11 434 aaKnown RBP8.79□□□□□ -1
TTC28-208ENST00000612946 MAU2Q9Y6X3 613 aa8.79□□□□□ -1
TTC28-208ENST00000612946 PP2D1A8MPX8 630 aa8.78□□□□□ -1
TTC28-208ENST00000612946 SLC28A1O00337 649 aa8.78□□□□□ -1
TTC28-208ENST00000612946 PRKAB2O43741 272 aa8.78□□□□□ -1
TTC28-208ENST00000612946 USP12O75317 370 aa8.78□□□□□ -1
TTC28-208ENST00000612946 C9P02748 559 aa8.78□□□□□ -1
TTC28-208ENST00000612946 SPARCP09486 303 aa8.78□□□□□ -1
TTC28-208ENST00000612946 ACO1P21399 889 aaKnown RBP8.78□□□□□ -1
TTC28-208ENST00000612946 SCNN1DP51172 638 aa8.78□□□□□ -1
TTC28-208ENST00000612946 SLC44A1Q8WWI5 657 aa8.78□□□□□ -1
TTC28-208ENST00000612946 KIF12Q96FN5 646 aa8.78□□□□□ -1
TTC28-208ENST00000612946 MSANTD3Q96H12 275 aa8.78□□□□□ -1
TTC28-208ENST00000612946 HYLS1Q96M11 299 aa8.78□□□□□ -1
TTC28-208ENST00000612946 PRKAG2Q9UGJ0 569 aa8.78□□□□□ -1
TTC28-208ENST00000612946 FAM205AQ6ZU69 1335 aa8.78□□□□□ -1
TTC28-208ENST00000612946 FAM86C2PA6NEL3 165 aa8.78□□□□□ -1
TTC28-208ENST00000612946 FAM47E-STBD1D6RA91 191 aa8.78□□□□□ -1
TTC28-208ENST00000612946 GRID2O43424 1007 aa8.78□□□□□ -1
TTC28-208ENST00000612946 FDPSP14324 419 aaKnown RBP8.78□□□□□ -1
TTC28-208ENST00000612946 ZYXQ15942 572 aaKnown RBP8.78□□□□□ -1
TTC28-208ENST00000612946 CDCA2Q69YH5 1023 aaPredicted RBP8.78□□□□□ -1
TTC28-208ENST00000612946 OR2T12Q8NG77 320 aa8.78□□□□□ -1
TTC28-208ENST00000612946 LIASO43766 372 aa8.78□□□□□ -1
TTC28-208ENST00000612946 GLRBP48167 497 aa8.78□□□□□ -1
TTC28-208ENST00000612946 CSHL1Q14406 222 aa8.78□□□□□ -1
TTC28-208ENST00000612946 TRAM1Q15629 374 aa8.78□□□□□ -1
TTC28-208ENST00000612946 QPCTQ16769 361 aa8.78□□□□□ -1
TTC28-208ENST00000612946 CTC1Q2NKJ3 1217 aa8.78□□□□□ -1
TTC28-208ENST00000612946 STXBP5Q5T5C0 1151 aa8.78□□□□□ -1
TTC28-208ENST00000612946 OAFQ86UD1 273 aa8.78□□□□□ -1
TTC28-208ENST00000612946 TERB2Q8NHR7 220 aa8.78□□□□□ -1
TTC28-208ENST00000612946 ZNF431Q8TF32 576 aaPredicted RBP8.78□□□□□ -1
TTC28-208ENST00000612946 KCTD7Q96MP8 289 aa8.78□□□□□ -1
TTC28-208ENST00000612946 CGRRF1Q99675 332 aa8.78□□□□□ -1
TTC28-208ENST00000612946 RETREG1Q9H6L5 497 aa8.78□□□□□ -1
TTC28-208ENST00000612946 C14orf105Q9NVL8 296 aa8.78□□□□□ -1
TTC28-208ENST00000612946 HMGXB4Q9UGU5 601 aa8.78□□□□□ -1
TTC28-208ENST00000612946 CBY1Q9Y3M2 126 aa8.78□□□□□ -1
TTC28-208ENST00000612946 PTPRJQ12913 1337 aa8.78□□□□□ -1
TTC28-208ENST00000612946 A0A088AWK7 358 aa8.78□□□□□ -1
TTC28-208ENST00000612946 GSG1L2A8MUP6 293 aa8.78□□□□□ -1
TTC28-208ENST00000612946 ZNF10P21506 573 aaPredicted RBP8.78□□□□□ -1
TTC28-208ENST00000612946 PWP1Q13610 501 aa8.78□□□□□ -1
TTC28-208ENST00000612946 PLEKHG7Q6ZR37 379 aa8.78□□□□□ -1
TTC28-208ENST00000612946 METTL6Q8TCB7 284 aa8.78□□□□□ -1
TTC28-208ENST00000612946 GJB4Q9NTQ9 266 aa8.78□□□□□ -1
TTC28-208ENST00000612946 WDR27A2RRH5 827 aa8.78□□□□□ -1
TTC28-208ENST00000612946 NDUFB5O43674 189 aa8.78□□□□□ -1
TTC28-208ENST00000612946 CALCAP01258 141 aa8.78□□□□□ -1
TTC28-208ENST00000612946 ITGB6P18564 788 aa8.78□□□□□ -1
TTC28-208ENST00000612946 CFL1P23528 166 aaKnown RBP8.78□□□□□ -1
TTC28-208ENST00000612946 DCDC1P59894 354 aa8.78□□□□□ -1
TTC28-208ENST00000612946 CDKL4Q5MAI5 379 aa8.78□□□□□ -1
TTC28-208ENST00000612946 FAM91A1Q658Y4 838 aa8.78□□□□□ -1
TTC28-208ENST00000612946 UBQLNLQ8IYU4 475 aa8.78□□□□□ -1
TTC28-208ENST00000612946 DNAJB14Q8TBM8 379 aa8.78□□□□□ -1
TTC28-208ENST00000612946 PHOX2BQ99453 314 aa8.78□□□□□ -1
TTC28-208ENST00000612946 DCSTAMPQ9H295 470 aa8.78□□□□□ -1
TTC28-208ENST00000612946 AP4E1Q9UPM8 1137 aa8.78□□□□□ -1
TTC28-208ENST00000612946 HSPB11Q9Y547 144 aa8.78□□□□□ -1
TTC28-208ENST00000612946 SMIM22K7EJ46 135 aa8.78□□□□□ -1
TTC28-208ENST00000612946 TBX1O43435 398 aa8.78□□□□□ -1
TTC28-208ENST00000612946 NFICP08651 508 aa8.78□□□□□ -1
TTC28-208ENST00000612946 ZNF267Q14586 743 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms