RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-223	ENST00000612130	PPP1R2P1	Q96PQ5	205 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	CHST12	Q9NRB3	414 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	TREX1	Q9NSU2	369 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	INTS10	Q9NVR2	710 aa	Known RBP	13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	MAP10	Q9P2G4	905 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	FBXO5	Q9UKT4	447 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	FZD1	Q9UP38	647 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	TLL2	Q9Y6L7	1015 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130		I6L893	689 aa	Predicted RBP	13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	FXYD1	O00168	92 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	PIR	O00625	290 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	ANGPT2	O15123	496 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	CD4	P01730	458 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	ALDOC	P09972	364 aa	Known RBP	13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	TXN	P10599	105 aa	Known RBP	13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	CDH3	P22223	829 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	RPS9	P46781	194 aa	Known RBP	13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	TUBA3C	Q13748	450 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	ACAP2	Q15057	778 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	SLC14A2	Q15849	920 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	RGS21	Q2M5E4	152 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	KIF19	Q2TAC6	998 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	CYBRD1	Q53TN4	286 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	OGFOD2	Q6N063	350 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	ZNF773	Q6PK81	442 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	OTOP3	Q7RTS5	596 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	SAMD7	Q7Z3H4	446 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	DDIAS	Q8IXT1	998 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	B3GALNT2	Q8NCR0	500 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	APPL2	Q8NEU8	664 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	SLC35B4	Q969S0	331 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	L3HYPDH	Q96EM0	354 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	FCRL5	Q96RD9	977 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	CYP2S1	Q96SQ9	504 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	NEURL2	Q9BR09	285 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	PRKD2	Q9BZL6	878 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	SEPT3	Q9UH03	358 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	CFAP99	D6REC4	459 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130		H0YAE9	185 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	TPST1	O60507	370 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	IMPDH1	P20839	514 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	MAP4	P27816	1152 aa	Known RBP	13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	OXTR	P30559	389 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	NR1D2	Q14995	579 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	SNX17	Q15036	470 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	DENND5A	Q6IQ26	1287 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	HFE2	Q6ZVN8	426 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	ARMCX2	Q7L311	632 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	OFCC1	Q8IZS5	231 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	PAPD5	Q8NDF8	572 aa	Known RBP	13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	ABHD8	Q96I13	439 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	NAA50	Q9GZZ1	169 aa	Known RBP	13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	FBRSL1	Q9HCM7	1045 aa	Known RBP	13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	CMTM6	Q9NX76	183 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	ZNF639	Q9UID6	485 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	DOLK	Q9UPQ8	538 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	ERGIC3	Q9Y282	383 aa		13.78	□□□□□ -0.2
UBE2F-223	ENST00000612130	UBFD1	O14562	309 aa	Known RBP	13.77	□□□□□ -0.21
UBE2F-223	ENST00000612130	MATN4	O95460	622 aa		13.77	□□□□□ -0.21
UBE2F-223	ENST00000612130	LGALS2	P05162	132 aa		13.77	□□□□□ -0.21
UBE2F-223	ENST00000612130	FYN	P06241	537 aa		13.77	□□□□□ -0.21
UBE2F-223	ENST00000612130	UMPS	P11172	480 aa		13.77	□□□□□ -0.21
UBE2F-223	ENST00000612130	CAPN3	P20807	821 aa		13.77	□□□□□ -0.21
UBE2F-223	ENST00000612130	SLC6A2	P23975	617 aa		13.77	□□□□□ -0.21
UBE2F-223	ENST00000612130	HAL	P42357	657 aa		13.77	□□□□□ -0.21
UBE2F-223	ENST00000612130	ADARB1	P78563	741 aa	Known RBP	13.77	□□□□□ -0.21
UBE2F-223	ENST00000612130	NFKB2	Q00653	900 aa		13.77	□□□□□ -0.21
UBE2F-223	ENST00000612130	BTG3	Q14201	252 aa	Predicted RBP	13.77	□□□□□ -0.21
UBE2F-223	ENST00000612130	TTLL4	Q14679	1199 aa		13.77	□□□□□ -0.21
UBE2F-223	ENST00000612130	NEDD8	Q15843	81 aa		13.77	□□□□□ -0.21
UBE2F-223	ENST00000612130	RBM20	Q5T481	1227 aa	Known RBP	13.77	□□□□□ -0.21
UBE2F-223	ENST00000612130	C1QTNF12	Q5T7M4	302 aa		13.77	□□□□□ -0.21
UBE2F-223	ENST00000612130	CLEC6A	Q6EIG7	209 aa		13.77	□□□□□ -0.21
UBE2F-223	ENST00000612130	SLC27A1	Q6PCB7	646 aa		13.77	□□□□□ -0.21
UBE2F-223	ENST00000612130	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.77	□□□□□ -0.21
UBE2F-223	ENST00000612130	TBC1D21	Q8IYX1	336 aa		13.77	□□□□□ -0.21
UBE2F-223	ENST00000612130	MIER2	Q8N344	545 aa		13.77	□□□□□ -0.21
UBE2F-223	ENST00000612130	GABPB2	Q8TAK5	448 aa	Predicted RBP	13.77	□□□□□ -0.21
UBE2F-223	ENST00000612130	RAB2B	Q8WUD1	216 aa		13.77	□□□□□ -0.21
UBE2F-223	ENST00000612130	ASB2	Q96Q27	587 aa		13.77	□□□□□ -0.21
UBE2F-223	ENST00000612130	FICD	Q9BVA6	458 aa		13.77	□□□□□ -0.21
UBE2F-223	ENST00000612130	TRIM54	Q9BYV2	358 aa		13.77	□□□□□ -0.21
UBE2F-223	ENST00000612130	EGFL7	Q9UHF1	273 aa		13.77	□□□□□ -0.21
UBE2F-223	ENST00000612130	ZNF236	Q9UL36	1845 aa		13.77	□□□□□ -0.21
UBE2F-223	ENST00000612130	NRP1	O14786	923 aa		13.76	□□□□□ -0.21
UBE2F-223	ENST00000612130	SPTLC1	O15269	473 aa		13.76	□□□□□ -0.21
UBE2F-223	ENST00000612130	DYNC1LI2	O43237	492 aa	Predicted RBP	13.76	□□□□□ -0.21
UBE2F-223	ENST00000612130	SEC14L2	O76054	403 aa		13.76	□□□□□ -0.21
UBE2F-223	ENST00000612130	CLIC3	O95833	236 aa		13.76	□□□□□ -0.21
UBE2F-223	ENST00000612130	BCL10	O95999	233 aa		13.76	□□□□□ -0.21
UBE2F-223	ENST00000612130	MBL2	P11226	248 aa	Predicted RBP	13.76	□□□□□ -0.21
UBE2F-223	ENST00000612130	WARS	P23381	471 aa	Known RBP	13.76	□□□□□ -0.21
UBE2F-223	ENST00000612130	NDUFV1	P49821	464 aa		13.76	□□□□□ -0.21
UBE2F-223	ENST00000612130	PLK1	P53350	603 aa		13.76	□□□□□ -0.21
UBE2F-223	ENST00000612130	GEM	P55040	296 aa		13.76	□□□□□ -0.21
UBE2F-223	ENST00000612130	TNK2	Q07912	1038 aa		13.76	□□□□□ -0.21
UBE2F-223	ENST00000612130	ATP1A4	Q13733	1029 aa		13.76	□□□□□ -0.21
UBE2F-223	ENST00000612130	ZNF678	Q5SXM1	525 aa		13.76	□□□□□ -0.21
UBE2F-223	ENST00000612130	ZNF618	Q5T7W0	954 aa		13.76	□□□□□ -0.21
UBE2F-223	ENST00000612130	NEPRO	Q6NW34	567 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms