RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 C14orf28Q4W4Y0 310 aa13.41□□□□□ -0.26
HMGB1P24-201ENST00000611897 MANEAQ5SRI9 462 aa13.41□□□□□ -0.26
HMGB1P24-201ENST00000611897 CERCAMQ5T4B2 595 aa13.41□□□□□ -0.26
HMGB1P24-201ENST00000611897 SPECC1LQ69YQ0 1117 aa13.41□□□□□ -0.26
HMGB1P24-201ENST00000611897 ARHGAP36Q6ZRI8 547 aa13.41□□□□□ -0.26
HMGB1P24-201ENST00000611897 SPRED1Q7Z699 444 aa13.41□□□□□ -0.26
HMGB1P24-201ENST00000611897 ZFAND4Q86XD8 727 aa13.41□□□□□ -0.26
HMGB1P24-201ENST00000611897 GPR156Q8NFN8 814 aa13.41□□□□□ -0.26
HMGB1P24-201ENST00000611897 OR6C4Q8NGE1 309 aa13.41□□□□□ -0.26
HMGB1P24-201ENST00000611897 JPH3Q8WXH2 748 aaPredicted RBP13.41□□□□□ -0.26
HMGB1P24-201ENST00000611897 TUBGCP5Q96RT8 1024 aa13.41□□□□□ -0.26
HMGB1P24-201ENST00000611897 SNRNP25Q9BV90 132 aaKnown RBP13.41□□□□□ -0.26
HMGB1P24-201ENST00000611897 FAM117AQ9C073 453 aa13.41□□□□□ -0.26
HMGB1P24-201ENST00000611897 CARS2Q9HA77 564 aaKnown RBP13.41□□□□□ -0.26
HMGB1P24-201ENST00000611897 RDH14Q9HBH5 336 aa13.41□□□□□ -0.26
HMGB1P24-201ENST00000611897 TAS2R14Q9NYV8 317 aa13.41□□□□□ -0.26
HMGB1P24-201ENST00000611897 LRIT1Q9P2V4 623 aa13.41□□□□□ -0.26
HMGB1P24-201ENST00000611897 TCRBV5S1A1TA0A578 114 aa13.4□□□□□ -0.26
HMGB1P24-201ENST00000611897 EFSO43281 561 aa13.4□□□□□ -0.26
HMGB1P24-201ENST00000611897 NOBOXO60393 691 aa13.4□□□□□ -0.26
HMGB1P24-201ENST00000611897 LIPCP11150 499 aa13.4□□□□□ -0.26
HMGB1P24-201ENST00000611897 GLB1P16278 677 aa13.4□□□□□ -0.26
HMGB1P24-201ENST00000611897 CDK11BP21127 795 aaKnown RBP13.4□□□□□ -0.26
HMGB1P24-201ENST00000611897 CCKBRP32239 447 aa13.4□□□□□ -0.26
HMGB1P24-201ENST00000611897 AIF1P55008 147 aa13.4□□□□□ -0.26
HMGB1P24-201ENST00000611897 LIPIQ6XZB0 460 aa13.4□□□□□ -0.26
HMGB1P24-201ENST00000611897 MCOLN2Q8IZK6 566 aa13.4□□□□□ -0.26
HMGB1P24-201ENST00000611897 PELI3Q8N2H9 469 aa13.4□□□□□ -0.26
HMGB1P24-201ENST00000611897 COL26A1Q96A83 441 aa13.4□□□□□ -0.26
HMGB1P24-201ENST00000611897 NUS1Q96E22 293 aa13.4□□□□□ -0.26
HMGB1P24-201ENST00000611897 SGF29Q96ES7 293 aa13.4□□□□□ -0.26
HMGB1P24-201ENST00000611897 PEBP4Q96S96 227 aa13.4□□□□□ -0.26
HMGB1P24-201ENST00000611897 KCTD15Q96SI1 283 aaPredicted RBP13.4□□□□□ -0.26
HMGB1P24-201ENST00000611897 LGR4Q9BXB1 951 aa13.4□□□□□ -0.26
HMGB1P24-201ENST00000611897 CLMPQ9H6B4 373 aa13.4□□□□□ -0.26
HMGB1P24-201ENST00000611897 DONSONQ9NYP3 566 aa13.4□□□□□ -0.26
HMGB1P24-201ENST00000611897 FOXJ2Q9P0K8 574 aa13.4□□□□□ -0.26
HMGB1P24-201ENST00000611897 SEPT10Q9P0V9 454 aa13.4□□□□□ -0.26
HMGB1P24-201ENST00000611897 B4GALT6Q9UBX8 382 aa13.4□□□□□ -0.26
HMGB1P24-201ENST00000611897 SSUH2Q9Y2M2 353 aa13.4□□□□□ -0.26
HMGB1P24-201ENST00000611897 PCDHGA7Q9Y5G6 932 aa13.4□□□□□ -0.26
HMGB1P24-201ENST00000611897 DGKBQ9Y6T7 804 aa13.4□□□□□ -0.26
HMGB1P24-201ENST00000611897 MAST4O15021 2626 aa13.4□□□□□ -0.26
HMGB1P24-201ENST00000611897 PRSS38A1L453 326 aa13.39□□□□□ -0.27
HMGB1P24-201ENST00000611897 RHPN2P1A8MT19 583 aa13.39□□□□□ -0.27
HMGB1P24-201ENST00000611897 FAM87AP0C7U9 286 aa13.39□□□□□ -0.27
HMGB1P24-201ENST00000611897 ERCC2P18074 760 aa13.39□□□□□ -0.27
HMGB1P24-201ENST00000611897 TNFAIP3P21580 790 aa13.39□□□□□ -0.27
HMGB1P24-201ENST00000611897 ALDH4A1P30038 563 aa13.39□□□□□ -0.27
HMGB1P24-201ENST00000611897 ZNF235Q14590 738 aa13.39□□□□□ -0.27
HMGB1P24-201ENST00000611897 CT47A1Q5JQC4 288 aaPredicted RBP13.39□□□□□ -0.27
HMGB1P24-201ENST00000611897 PPP1R15BQ5SWA1 713 aa13.39□□□□□ -0.27
HMGB1P24-201ENST00000611897 ACAD10Q6JQN1 1059 aa13.39□□□□□ -0.27
HMGB1P24-201ENST00000611897 DOK6Q6PKX4 331 aa13.39□□□□□ -0.27
HMGB1P24-201ENST00000611897 RFX8Q6ZV50 586 aa13.39□□□□□ -0.27
HMGB1P24-201ENST00000611897 DPPA4Q7L190 304 aa13.39□□□□□ -0.27
HMGB1P24-201ENST00000611897 TMPRSS9Q7Z410 1059 aa13.39□□□□□ -0.27
HMGB1P24-201ENST00000611897 HEATR4Q86WZ0 1026 aa13.39□□□□□ -0.27
HMGB1P24-201ENST00000611897 NPWQ8N729 165 aa13.39□□□□□ -0.27
HMGB1P24-201ENST00000611897 EXD3Q8N9H8 876 aa13.39□□□□□ -0.27
HMGB1P24-201ENST00000611897 KIAA1524Q8TCG1 905 aa13.39□□□□□ -0.27
HMGB1P24-201ENST00000611897 HCAR2Q8TDS4 363 aa13.39□□□□□ -0.27
HMGB1P24-201ENST00000611897 USP7Q93009 1102 aa13.39□□□□□ -0.27
HMGB1P24-201ENST00000611897 CMKLR1Q99788 373 aa13.39□□□□□ -0.27
HMGB1P24-201ENST00000611897 SEMA6CQ9H3T2 930 aa13.39□□□□□ -0.27
HMGB1P24-201ENST00000611897 AKAP7Q9P0M2 348 aaPredicted RBP13.39□□□□□ -0.27
HMGB1P24-201ENST00000611897 PCDHB11Q9Y5F2 797 aa13.39□□□□□ -0.27
HMGB1P24-201ENST00000611897 NAV2Q8IVL1 2488 aa13.39□□□□□ -0.27
HMGB1P24-201ENST00000611897 SDK2Q58EX2 2172 aa13.38□□□□□ -0.27
HMGB1P24-201ENST00000611897 PRPSAP2O60256 369 aa13.38□□□□□ -0.27
HMGB1P24-201ENST00000611897 CPP00450 1065 aa13.38□□□□□ -0.27
HMGB1P24-201ENST00000611897 FERP16591 822 aa13.38□□□□□ -0.27
HMGB1P24-201ENST00000611897 AK4P27144 223 aaPredicted RBP13.38□□□□□ -0.27
HMGB1P24-201ENST00000611897 HTR7P34969 479 aa13.38□□□□□ -0.27
HMGB1P24-201ENST00000611897 GNPDA1P46926 289 aa13.38□□□□□ -0.27
HMGB1P24-201ENST00000611897 OR1D5P58170 312 aa13.38□□□□□ -0.27
HMGB1P24-201ENST00000611897 POLR2LP62875 67 aaKnown RBP13.38□□□□□ -0.27
HMGB1P24-201ENST00000611897 CYP4F2P78329 520 aa13.38□□□□□ -0.27
HMGB1P24-201ENST00000611897 MYL5Q02045 173 aa13.38□□□□□ -0.27
HMGB1P24-201ENST00000611897 KCNC4Q03721 635 aa13.38□□□□□ -0.27
HMGB1P24-201ENST00000611897 ILF3Q12906 894 aaKnown RBP eCLIP13.38□□□□□ -0.27
HMGB1P24-201ENST00000611897 HLTFQ14527 1009 aaKnown RBP eCLIP13.38□□□□□ -0.27
HMGB1P24-201ENST00000611897 C16orf72Q14CZ0 275 aa13.38□□□□□ -0.27
HMGB1P24-201ENST00000611897 ERMARDQ5T6L9 678 aa13.38□□□□□ -0.27
HMGB1P24-201ENST00000611897 SLC30A9Q6PML9 568 aa13.38□□□□□ -0.27
HMGB1P24-201ENST00000611897 SASS6Q6UVJ0 657 aa13.38□□□□□ -0.27
HMGB1P24-201ENST00000611897 ARHGAP12Q8IWW6 846 aa13.38□□□□□ -0.27
HMGB1P24-201ENST00000611897 TP53INP2Q8IXH6 220 aa13.38□□□□□ -0.27
HMGB1P24-201ENST00000611897 RCBTB1Q8NDN9 531 aa13.38□□□□□ -0.27
HMGB1P24-201ENST00000611897 NUDT22Q9BRQ3 303 aa13.38□□□□□ -0.27
HMGB1P24-201ENST00000611897 TRIM7Q9C029 511 aa13.38□□□□□ -0.27
HMGB1P24-201ENST00000611897 PHPT1Q9NRX4 125 aaPredicted RBP13.38□□□□□ -0.27
HMGB1P24-201ENST00000611897 SEPT3Q9UH03 358 aa13.38□□□□□ -0.27
HMGB1P24-201ENST00000611897 APPL1Q9UKG1 709 aa13.38□□□□□ -0.27
HMGB1P24-201ENST00000611897 PCDHGA4Q9Y5G9 962 aa13.38□□□□□ -0.27
HMGB1P24-201ENST00000611897 NVLO15381 856 aaKnown RBP13.37□□□□□ -0.27
HMGB1P24-201ENST00000611897 RNF8O76064 485 aa13.37□□□□□ -0.27
HMGB1P24-201ENST00000611897 CCDC172P0C7W6 258 aa13.37□□□□□ -0.27
HMGB1P24-201ENST00000611897 MYCLP1P12525 358 aaPredicted RBP13.37□□□□□ -0.27
HMGB1P24-201ENST00000611897 AP1S1P61966 158 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms