RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	ABHD8	Q96I13	439 aa		13.95	□□□□□ -0.18
COPS7B-223	ENST00000611614	ATXN3L	Q9H3M9	355 aa		13.95	□□□□□ -0.18
COPS7B-223	ENST00000611614	EBF3	Q9H4W6	596 aa		13.95	□□□□□ -0.18
COPS7B-223	ENST00000611614	ZNF334	Q9HCZ1	680 aa	Predicted RBP	13.95	□□□□□ -0.18
COPS7B-223	ENST00000611614	WASH4P	A8MWX3	477 aa		13.95	□□□□□ -0.18
COPS7B-223	ENST00000611614	GRM6	O15303	877 aa		13.95	□□□□□ -0.18
COPS7B-223	ENST00000611614	PHGDH	O43175	533 aa	Known RBP	13.95	□□□□□ -0.18
COPS7B-223	ENST00000611614	AP1G1	O43747	822 aa		13.95	□□□□□ -0.18
COPS7B-223	ENST00000611614	VAPB	O95292	243 aa		13.95	□□□□□ -0.18
COPS7B-223	ENST00000611614	SAT1	P21673	171 aa		13.95	□□□□□ -0.18
COPS7B-223	ENST00000611614	ARCN1	P48444	511 aa	Known RBP	13.95	□□□□□ -0.18
COPS7B-223	ENST00000611614	CLCN4	P51793	760 aa		13.95	□□□□□ -0.18
COPS7B-223	ENST00000611614	FSCB	Q5H9T9	825 aa		13.95	□□□□□ -0.18
COPS7B-223	ENST00000611614	LIPM	Q5VYY2	423 aa		13.95	□□□□□ -0.18
COPS7B-223	ENST00000611614	ESRP1	Q6NXG1	681 aa	Known RBP	13.95	□□□□□ -0.18
COPS7B-223	ENST00000611614	ARHGAP22	Q7Z5H3	698 aa		13.95	□□□□□ -0.18
COPS7B-223	ENST00000611614	ZNF354C	Q86Y25	554 aa		13.95	□□□□□ -0.18
COPS7B-223	ENST00000611614	SLC41A1	Q8IVJ1	513 aa		13.95	□□□□□ -0.18
COPS7B-223	ENST00000611614	TMEM151A	Q8N4L1	468 aa		13.95	□□□□□ -0.18
COPS7B-223	ENST00000611614	POU5F2	Q8N7G0	328 aa		13.95	□□□□□ -0.18
COPS7B-223	ENST00000611614	CORO1B	Q9BR76	489 aa		13.95	□□□□□ -0.18
COPS7B-223	ENST00000611614	ILKAP	Q9H0C8	392 aa	Predicted RBP	13.95	□□□□□ -0.18
COPS7B-223	ENST00000611614	RNF38	Q9H0F5	515 aa		13.95	□□□□□ -0.18
COPS7B-223	ENST00000611614	TMEM248	Q9NWD8	314 aa		13.95	□□□□□ -0.18
COPS7B-223	ENST00000611614	RUVBL2	Q9Y230	463 aa	Known RBP	13.95	□□□□□ -0.18
COPS7B-223	ENST00000611614	IGLV3-10	A0A075B6K4	115 aa		13.94	□□□□□ -0.18
COPS7B-223	ENST00000611614	CCL16	O15467	120 aa		13.94	□□□□□ -0.18
COPS7B-223	ENST00000611614	PMPCB	O75439	489 aa		13.94	□□□□□ -0.18
COPS7B-223	ENST00000611614	SBK3	P0C264	359 aa		13.94	□□□□□ -0.18
COPS7B-223	ENST00000611614	SLC35E2B	P0CK96	405 aa		13.94	□□□□□ -0.18
COPS7B-223	ENST00000611614	CORO1A	P31146	461 aa	Known RBP	13.94	□□□□□ -0.18
COPS7B-223	ENST00000611614	NDST2	P52849	883 aa		13.94	□□□□□ -0.18
COPS7B-223	ENST00000611614	SLC25A3	Q00325	362 aa		13.94	□□□□□ -0.18
COPS7B-223	ENST00000611614	LSAMP	Q13449	338 aa		13.94	□□□□□ -0.18
COPS7B-223	ENST00000611614	GPM6B	Q13491	265 aa		13.94	□□□□□ -0.18
COPS7B-223	ENST00000611614	LAMB3	Q13751	1172 aa		13.94	□□□□□ -0.18
COPS7B-223	ENST00000611614	CCNI	Q14094	377 aa		13.94	□□□□□ -0.18
COPS7B-223	ENST00000611614	METTL21C	Q5VZV1	264 aa		13.94	□□□□□ -0.18
COPS7B-223	ENST00000611614	LGI2	Q8N0V4	545 aa		13.94	□□□□□ -0.18
COPS7B-223	ENST00000611614	SCYL1	Q96KG9	808 aa		13.94	□□□□□ -0.18
COPS7B-223	ENST00000611614	MRGPRX2	Q96LB1	330 aa		13.94	□□□□□ -0.18
COPS7B-223	ENST00000611614	FSD1L	Q9BXM9	530 aa		13.94	□□□□□ -0.18
COPS7B-223	ENST00000611614	DRC3	Q9H069	523 aa		13.94	□□□□□ -0.18
COPS7B-223	ENST00000611614	GKN1	Q9NS71	199 aa		13.94	□□□□□ -0.18
COPS7B-223	ENST00000611614	SMPD4	Q9NXE4	827 aa		13.94	□□□□□ -0.18
COPS7B-223	ENST00000611614	STC2	O76061	302 aa		13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	FGF19	O95750	216 aa		13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	CKM	P06732	381 aa		13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	PAM	P19021	973 aa		13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	ARNT	P27540	789 aa		13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	AVPR1A	P37288	418 aa		13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	MPP1	Q00013	466 aa		13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	SLC9B1	Q4ZJI4	515 aa		13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	TXNDC8	Q6A555	127 aa		13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	RANBP10	Q6VN20	620 aa		13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	DENND6A	Q8IWF6	608 aa		13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	ARL14EP	Q8N8R7	260 aa	Predicted RBP	13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	GDPD5	Q8WTR4	605 aa		13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	STYX	Q8WUJ0	223 aa		13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	KCTD4	Q8WVF5	259 aa		13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	KLF16	Q9BXK1	252 aa	Predicted RBP	13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	IPO11	Q9UI26	975 aa	Known RBP	13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	CDH22	Q9UJ99	828 aa		13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	ACOT9	Q9Y305	439 aa		13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	RAP2C	Q9Y3L5	183 aa		13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	DRGX	A6NNA5	263 aa		13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	TK2	O00142	265 aa		13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	C1R	P00736	705 aa		13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	OR1E1	P30953	314 aa		13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	HK2	P52789	917 aa		13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	RAB10	P61026	200 aa		13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	SMAD3	P84022	425 aa	Known RBP	13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	CTBP1	Q13363	440 aa		13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	FAM109B	Q6ICB4	259 aa	Predicted RBP	13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	KIAA0930	Q6ICG6	404 aa	Predicted RBP	13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	TMEM150A	Q86TG1	271 aa		13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	UMODL1-AS1	Q8N2C9	162 aa		13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	SLC25A41	Q8N5S1	370 aa		13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	DRAXIN	Q8NBI3	349 aa	Predicted RBP	13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	TTC16	Q8NEE8	873 aa		13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	SLC26A7	Q8TE54	656 aa		13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	IGSF8	Q969P0	613 aa		13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	PRKD2	Q9BZL6	878 aa		13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	RETREG1	Q9H6L5	497 aa		13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	IL21	Q9HBE4	155 aa		13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	MAN1C1	Q9NR34	630 aa		13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	TREX1	Q9NSU2	369 aa		13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	SLC2A6	Q9UGQ3	507 aa		13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	LSM7	Q9UK45	103 aa	Known RBP	13.93	□□□□□ -0.18
COPS7B-223	ENST00000611614	TRAV19	A0A0A6YYK7	116 aa		13.92	□□□□□ -0.18
COPS7B-223	ENST00000611614	FAM95C	A0A1B0GW59	222 aa		13.92	□□□□□ -0.18
COPS7B-223	ENST00000611614	RAMP2	O60895	175 aa		13.92	□□□□□ -0.18
COPS7B-223	ENST00000611614	XYLB	O75191	536 aa		13.92	□□□□□ -0.18
COPS7B-223	ENST00000611614	VCL	P18206	1134 aa		13.92	□□□□□ -0.18
COPS7B-223	ENST00000611614	IRS1	P35568	1242 aa		13.92	□□□□□ -0.18
COPS7B-223	ENST00000611614	GRIA4	P48058	902 aa		13.92	□□□□□ -0.18
COPS7B-223	ENST00000611614	MAPKAPK2	P49137	400 aa		13.92	□□□□□ -0.18
COPS7B-223	ENST00000611614	ALF	Q53S48	1182 aa		13.92	□□□□□ -0.18
COPS7B-223	ENST00000611614	SFT2D3	Q587I9	215 aa		13.92	□□□□□ -0.18
COPS7B-223	ENST00000611614	ADGRF1	Q5T601	910 aa		13.92	□□□□□ -0.18

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