RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 FBXW8Q8N3Y1 598 aa16.05■□□□□ 0.16
RTN1-209ENST00000611068 NPWQ8N729 165 aa16.05■□□□□ 0.16
RTN1-209ENST00000611068 FERMT1Q9BQL6 677 aa16.05■□□□□ 0.16
RTN1-209ENST00000611068 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.05■□□□□ 0.16
RTN1-209ENST00000611068 NLRC5Q86WI3 1866 aa16.05■□□□□ 0.16
RTN1-209ENST00000611068 C7orf72A4D263 438 aa16.04■□□□□ 0.16
RTN1-209ENST00000611068 METTL18O95568 372 aa16.04■□□□□ 0.16
RTN1-209ENST00000611068 ITGAXP20702 1163 aa16.04■□□□□ 0.16
RTN1-209ENST00000611068 EPHA3P29320 983 aa16.04■□□□□ 0.16
RTN1-209ENST00000611068 COPAP53621 1224 aa16.04■□□□□ 0.16
RTN1-209ENST00000611068 TPTEP56180 551 aa16.04■□□□□ 0.16
RTN1-209ENST00000611068 TAF10Q12962 218 aa16.04■□□□□ 0.16
RTN1-209ENST00000611068 MOGQ16653 247 aa16.04■□□□□ 0.16
RTN1-209ENST00000611068 ANKRD26P1Q6NSI1 321 aa16.04■□□□□ 0.16
RTN1-209ENST00000611068 CDHR3Q6ZTQ4 885 aa16.04■□□□□ 0.16
RTN1-209ENST00000611068 BTLAQ7Z6A9 289 aa16.04■□□□□ 0.16
RTN1-209ENST00000611068 FBXO22Q8NEZ5 403 aa16.04■□□□□ 0.16
RTN1-209ENST00000611068 GABPB2Q8TAK5 448 aaPredicted RBP16.04■□□□□ 0.16
RTN1-209ENST00000611068 CALML6Q8TD86 181 aa16.04■□□□□ 0.16
RTN1-209ENST00000611068 TOX2Q96NM4 488 aa16.04■□□□□ 0.16
RTN1-209ENST00000611068 CWH43Q9H720 699 aa16.04■□□□□ 0.16
RTN1-209ENST00000611068 VPS45Q9NRW7 570 aa16.04■□□□□ 0.16
RTN1-209ENST00000611068 OLAHQ9NV23 265 aa16.04■□□□□ 0.16
RTN1-209ENST00000611068 CLUHO75153 1309 aa16.04■□□□□ 0.16
RTN1-209ENST00000611068 LOC100653049A0A140TA62 436 aa16.04■□□□□ 0.16
RTN1-209ENST00000611068 ZBBXA8MT70 800 aa16.04■□□□□ 0.16
RTN1-209ENST00000611068 GIPC1O14908 333 aa16.04■□□□□ 0.16
RTN1-209ENST00000611068 KRT34O76011 436 aa16.04■□□□□ 0.16
RTN1-209ENST00000611068 LRIG2O94898 1065 aa16.04■□□□□ 0.16
RTN1-209ENST00000611068 MSX2P35548 267 aaPredicted RBP16.04■□□□□ 0.16
RTN1-209ENST00000611068 MRPL58Q14197 206 aaKnown RBP16.04■□□□□ 0.16
RTN1-209ENST00000611068 OXA1LQ15070 435 aa16.04■□□□□ 0.16
RTN1-209ENST00000611068 NFE2Q16621 373 aaPredicted RBP16.04■□□□□ 0.16
RTN1-209ENST00000611068 CCDC58Q4VC31 144 aa16.04■□□□□ 0.16
RTN1-209ENST00000611068 TMTC4Q5T4D3 741 aa16.04■□□□□ 0.16
RTN1-209ENST00000611068 DNAJC5GQ8N7S2 189 aa16.04■□□□□ 0.16
RTN1-209ENST00000611068 PKP2Q99959 881 aa16.04■□□□□ 0.16
RTN1-209ENST00000611068 PCDH12Q9NPG4 1184 aa16.04■□□□□ 0.16
RTN1-209ENST00000611068 WDR27A2RRH5 827 aa16.03■□□□□ 0.16
RTN1-209ENST00000611068 SDR42E2A6NKP2 422 aa16.03■□□□□ 0.16
RTN1-209ENST00000611068 SCAMP3O14828 347 aaKnown RBP16.03■□□□□ 0.16
RTN1-209ENST00000611068 KMOO15229 486 aa16.03■□□□□ 0.16
RTN1-209ENST00000611068 GRIA1P42261 906 aa16.03■□□□□ 0.16
RTN1-209ENST00000611068 CLK3P49761 638 aaKnown RBP16.03■□□□□ 0.16
RTN1-209ENST00000611068 OLIG2Q13516 323 aa16.03■□□□□ 0.16
RTN1-209ENST00000611068 LSM12Q3MHD2 195 aaKnown RBP16.03■□□□□ 0.16
RTN1-209ENST00000611068 PPIL6Q8IXY8 311 aa16.03■□□□□ 0.16
RTN1-209ENST00000611068 BBOF1Q8ND07 529 aa16.03■□□□□ 0.16
RTN1-209ENST00000611068 SUN5Q8TC36 379 aa16.03■□□□□ 0.16
RTN1-209ENST00000611068 FBXO32Q969P5 355 aa16.03■□□□□ 0.16
RTN1-209ENST00000611068 OLFM1Q99784 485 aa16.03■□□□□ 0.16
RTN1-209ENST00000611068 MRPL9Q9BYD2 267 aaKnown RBP16.03■□□□□ 0.16
RTN1-209ENST00000611068 PRDM12Q9H4Q4 367 aa16.03■□□□□ 0.16
RTN1-209ENST00000611068 MPP6Q9NZW5 540 aa16.03■□□□□ 0.16
RTN1-209ENST00000611068 CPQQ9Y646 472 aa16.03■□□□□ 0.16
RTN1-209ENST00000611068 PLOD2O00469 737 aa16.03■□□□□ 0.16
RTN1-209ENST00000611068 CLOCKO15516 846 aa16.03■□□□□ 0.16
RTN1-209ENST00000611068 HOXA2O43364 376 aa16.03■□□□□ 0.16
RTN1-209ENST00000611068 POLR2EP19388 210 aaKnown RBP16.03■□□□□ 0.16
RTN1-209ENST00000611068 NR4A2P43354 598 aa16.03■□□□□ 0.16
RTN1-209ENST00000611068 CXCR3P49682 368 aa16.03■□□□□ 0.16
RTN1-209ENST00000611068 ATXN3P54252 364 aaPredicted RBP16.03■□□□□ 0.16
RTN1-209ENST00000611068 TMPRSS15P98073 1019 aa16.03■□□□□ 0.16
RTN1-209ENST00000611068 MORF4L2Q15014 288 aa16.03■□□□□ 0.16
RTN1-209ENST00000611068 TBCCQ15814 346 aa16.03■□□□□ 0.16
RTN1-209ENST00000611068 HIF1AQ16665 826 aa16.03■□□□□ 0.16
RTN1-209ENST00000611068 PERM1Q5SV97 790 aa16.03■□□□□ 0.16
RTN1-209ENST00000611068 HEATR6Q6AI08 1181 aaKnown RBP16.03■□□□□ 0.16
RTN1-209ENST00000611068 CNKSR3Q6P9H4 555 aa16.03■□□□□ 0.16
RTN1-209ENST00000611068 ADGRD1Q6QNK2 874 aa16.03■□□□□ 0.16
RTN1-209ENST00000611068 IGDCC3Q8IVU1 814 aa16.03■□□□□ 0.16
RTN1-209ENST00000611068 CLIP4Q8N3C7 705 aa16.03■□□□□ 0.16
RTN1-209ENST00000611068 NAT8LQ8N9F0 302 aa16.03■□□□□ 0.16
RTN1-209ENST00000611068 ABCC13Q9NSE7 274 aa16.03■□□□□ 0.16
RTN1-209ENST00000611068 MYRFQ9Y2G1 1151 aa16.03■□□□□ 0.16
RTN1-209ENST00000611068 FARP1Q9Y4F1 1045 aaPredicted RBP16.03■□□□□ 0.16
RTN1-209ENST00000611068 ST14Q9Y5Y6 855 aa16.03■□□□□ 0.16
RTN1-209ENST00000611068 IL1BP01584 269 aa16.02■□□□□ 0.16
RTN1-209ENST00000611068 MAPK10P53779 464 aa16.02■□□□□ 0.16
RTN1-209ENST00000611068 ZBED5Q49AG3 693 aa16.02■□□□□ 0.16
RTN1-209ENST00000611068 GPR107Q5VW38 600 aa16.02■□□□□ 0.16
RTN1-209ENST00000611068 GALNT18Q6P9A2 607 aa16.02■□□□□ 0.16
RTN1-209ENST00000611068 CCDC81Q6ZN84 652 aa16.02■□□□□ 0.16
RTN1-209ENST00000611068 SNX29P2Q8IUI4 249 aa16.02■□□□□ 0.16
RTN1-209ENST00000611068 ESX1Q8N693 406 aa16.02■□□□□ 0.16
RTN1-209ENST00000611068 ATP6V0D2Q8N8Y2 350 aa16.02■□□□□ 0.16
RTN1-209ENST00000611068 ADCY4Q8NFM4 1077 aa16.02■□□□□ 0.16
RTN1-209ENST00000611068 DCAKDQ8WVC6 231 aa16.02■□□□□ 0.16
RTN1-209ENST00000611068 TFB1MQ8WVM0 346 aaKnown RBP16.02■□□□□ 0.16
RTN1-209ENST00000611068 TP63Q9H3D4 680 aaPredicted RBP16.02■□□□□ 0.16
RTN1-209ENST00000611068 DNAJC16Q9Y2G8 782 aa16.02■□□□□ 0.16
RTN1-209ENST00000611068 C1orf232A0A0U1RR37 186 aa16.02■□□□□ 0.15
RTN1-209ENST00000611068 ALOX15BO15296 676 aa16.02■□□□□ 0.15
RTN1-209ENST00000611068 PAGE1O75459 146 aa16.02■□□□□ 0.15
RTN1-209ENST00000611068 EIF2S1P05198 315 aaKnown RBP16.02■□□□□ 0.15
RTN1-209ENST00000611068 ZNF182P17025 639 aaPredicted RBP16.02■□□□□ 0.15
RTN1-209ENST00000611068 HNRNPFP52597 415 aaKnown RBP16.02■□□□□ 0.15
RTN1-209ENST00000611068 DPYSQ14117 519 aa16.02■□□□□ 0.15
RTN1-209ENST00000611068 PSMD5Q16401 504 aa16.02■□□□□ 0.15
RTN1-209ENST00000611068 CRY1Q16526 586 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms