RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 CDYLQ9Y232 598 aa11.98□□□□□ -0.49
USP6NL-206ENST00000609853 ARL5AQ9Y689 179 aa11.98□□□□□ -0.49
USP6NL-206ENST00000609853 ANKRD36A6QL64 1941 aa11.98□□□□□ -0.49
USP6NL-206ENST00000609853 BPTFQ12830 3046 aa11.98□□□□□ -0.49
USP6NL-206ENST00000609853 CCDC162PA2VCL2 907 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 CBX4O00257 560 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 OLFM2O95897 454 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 C1RP00736 705 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 CLTBP09497 229 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 THRAP10827 490 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 MBL2P11226 248 aaPredicted RBP11.97□□□□□ -0.49
USP6NL-206ENST00000609853 GNAZP19086 355 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 CPA2P48052 419 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 MNX1P50219 401 aaPredicted RBP11.97□□□□□ -0.49
USP6NL-206ENST00000609853 ZNF140P52738 457 aaPredicted RBP11.97□□□□□ -0.49
USP6NL-206ENST00000609853 NAA20P61599 178 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 NFKB2Q00653 900 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 TWF1Q12792 350 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 GALNT3Q14435 633 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 CYTH1Q15438 398 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 SLC9B1Q4ZJI4 515 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 VWA5B1Q5TIE3 1220 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 RNF219Q5W0B1 726 aaPredicted RBP11.97□□□□□ -0.49
USP6NL-206ENST00000609853 CXorf57Q6NSI4 855 aaKnown RBP11.97□□□□□ -0.49
USP6NL-206ENST00000609853 MFN1Q8IWA4 741 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.97□□□□□ -0.49
USP6NL-206ENST00000609853 ULK2Q8IYT8 1036 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 CCNYL1Q8N7R7 359 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 TXNDC5Q8NBS9 432 aaKnown RBP11.97□□□□□ -0.49
USP6NL-206ENST00000609853 OR52K2Q8NGK3 314 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 RMDN1Q96DB5 314 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 FAM161BQ96MY7 647 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 C19orf43Q9BQ61 176 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 RTKNQ9BST9 563 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 SYTL2Q9HCH5 934 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 MARCH4Q9P2E8 410 aaPredicted RBP11.97□□□□□ -0.49
USP6NL-206ENST00000609853 ZDHHC2Q9UIJ5 367 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 ARHGAP26Q9UNA1 814 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 ZNF510Q9Y2H8 683 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 INSL5Q9Y5Q6 135 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 C2orf78A6NCI8 922 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 GRID2O43424 1007 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 DCXO43602 365 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 F11P03951 625 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 PFKLP17858 780 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 IMPDH1P20839 514 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 CD9P21926 228 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 LPOP22079 712 aaPredicted RBP11.97□□□□□ -0.49
USP6NL-206ENST00000609853 SMAD3P84022 425 aaKnown RBP11.97□□□□□ -0.49
USP6NL-206ENST00000609853 KLF10Q13118 480 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 KPNB1Q14974 876 aaKnown RBP11.97□□□□□ -0.49
USP6NL-206ENST00000609853 HERC3Q15034 1050 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 KHDC1Q4VXA5 237 aaKnown RBP11.97□□□□□ -0.49
USP6NL-206ENST00000609853 GLT6D1Q7Z4J2 308 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 METTL3Q86U44 580 aaKnown RBP11.97□□□□□ -0.49
USP6NL-206ENST00000609853 FAM217AQ8IXS0 508 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 KDM1BQ8NB78 822 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 RHEBL1Q8TAI7 183 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 MAPK15Q8TD08 544 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 ACTRT2Q8TDY3 377 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 L3HYPDHQ96EM0 354 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 AARSD1Q9BTE6 412 aaKnown RBP11.97□□□□□ -0.49
USP6NL-206ENST00000609853 THTPAQ9BU02 230 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 BEGAINQ9BUH8 593 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 KCTD3Q9Y597 815 aa11.97□□□□□ -0.49
USP6NL-206ENST00000609853 KIAA1671Q9BY89 1806 aa11.96□□□□□ -0.49
USP6NL-206ENST00000609853 OBSL1O75147 1896 aa11.96□□□□□ -0.49
USP6NL-206ENST00000609853 GBF1Q92538 1859 aa11.96□□□□□ -0.49
USP6NL-206ENST00000609853 DENND4CQ5VZ89 1909 aa11.96□□□□□ -0.49
USP6NL-206ENST00000609853 CXorf51AA0A1B0GTR3 108 aa11.96□□□□□ -0.49
USP6NL-206ENST00000609853 RGSL1A5PLK6 1076 aa11.96□□□□□ -0.49
USP6NL-206ENST00000609853 A8MT66 165 aa11.96□□□□□ -0.49
USP6NL-206ENST00000609853 ANKRD66B4E2M5 251 aa11.96□□□□□ -0.49
USP6NL-206ENST00000609853 E9PBE3 544 aa11.96□□□□□ -0.49
USP6NL-206ENST00000609853 H0Y626 953 aa11.96□□□□□ -0.49
USP6NL-206ENST00000609853 GFRA2O00451 464 aa11.96□□□□□ -0.49
USP6NL-206ENST00000609853 KLHL41O60662 606 aa11.96□□□□□ -0.49
USP6NL-206ENST00000609853 SMIM24O75264 130 aa11.96□□□□□ -0.49
USP6NL-206ENST00000609853 MYCP01106 439 aaPredicted RBP11.96□□□□□ -0.49
USP6NL-206ENST00000609853 PRLP01236 227 aa11.96□□□□□ -0.49
USP6NL-206ENST00000609853 COX4I1P13073 169 aa11.96□□□□□ -0.49
USP6NL-206ENST00000609853 PPARGP37231 505 aaPredicted RBP11.96□□□□□ -0.49
USP6NL-206ENST00000609853 CDKN2DP55273 166 aa11.96□□□□□ -0.49
USP6NL-206ENST00000609853 ACTR3P61158 418 aa11.96□□□□□ -0.49
USP6NL-206ENST00000609853 LSM12Q3MHD2 195 aaKnown RBP11.96□□□□□ -0.49
USP6NL-206ENST00000609853 ACSBG2Q5FVE4 666 aa11.96□□□□□ -0.49
USP6NL-206ENST00000609853 ISCA2Q86U28 154 aa11.96□□□□□ -0.49
USP6NL-206ENST00000609853 OR13C4Q8NGS5 318 aa11.96□□□□□ -0.49
USP6NL-206ENST00000609853 RP9Q8TA86 221 aaKnown RBP11.96□□□□□ -0.49
USP6NL-206ENST00000609853 VWCEQ96DN2 955 aa11.96□□□□□ -0.49
USP6NL-206ENST00000609853 TMA16Q96EY4 203 aaKnown RBP11.96□□□□□ -0.49
USP6NL-206ENST00000609853 RSRC1Q96IZ7 334 aaKnown RBP11.96□□□□□ -0.49
USP6NL-206ENST00000609853 MAELQ96JY0 434 aaKnown RBP11.96□□□□□ -0.49
USP6NL-206ENST00000609853 ZFRQ96KR1 1074 aaKnown RBP11.96□□□□□ -0.49
USP6NL-206ENST00000609853 OR52B2Q96RD2 323 aa11.96□□□□□ -0.49
USP6NL-206ENST00000609853 CCDC68Q9H2F9 335 aa11.96□□□□□ -0.49
USP6NL-206ENST00000609853 TFB2MQ9H5Q4 396 aaKnown RBP11.96□□□□□ -0.49
USP6NL-206ENST00000609853 NDE1Q9NXR1 346 aa11.96□□□□□ -0.49
USP6NL-206ENST00000609853 STX18Q9P2W9 335 aaKnown RBP11.96□□□□□ -0.49
USP6NL-206ENST00000609853 NKX1-2Q9UD57 310 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms