RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 TTC24A2A3L6 582 aaPredicted RBP13.43□□□□□ -0.26
POLR2J3-219ENST00000608621 D6RAR5 112 aa13.43□□□□□ -0.26
POLR2J3-219ENST00000608621 TNFRSF10CO14798 259 aa13.43□□□□□ -0.26
POLR2J3-219ENST00000608621 EFSO43281 561 aa13.43□□□□□ -0.26
POLR2J3-219ENST00000608621 PRPSAP2O60256 369 aa13.43□□□□□ -0.26
POLR2J3-219ENST00000608621 FTLP02792 175 aaPredicted RBP13.43□□□□□ -0.26
POLR2J3-219ENST00000608621 HOXC4P09017 264 aaPredicted RBP13.43□□□□□ -0.26
POLR2J3-219ENST00000608621 HGFP14210 728 aa13.43□□□□□ -0.26
POLR2J3-219ENST00000608621 GLB1P16278 677 aa13.43□□□□□ -0.26
POLR2J3-219ENST00000608621 KELP23276 732 aa13.43□□□□□ -0.26
POLR2J3-219ENST00000608621 TRIM23P36406 574 aa13.43□□□□□ -0.26
POLR2J3-219ENST00000608621 HCAR3P49019 387 aa13.43□□□□□ -0.26
POLR2J3-219ENST00000608621 SLC10A7Q0GE19 358 aa13.43□□□□□ -0.26
POLR2J3-219ENST00000608621 EIF3IQ13347 325 aaKnown RBP13.43□□□□□ -0.26
POLR2J3-219ENST00000608621 RFTN1Q14699 578 aaPredicted RBP13.43□□□□□ -0.26
POLR2J3-219ENST00000608621 ACOX1Q15067 660 aa13.43□□□□□ -0.26
POLR2J3-219ENST00000608621 PNCKQ6P2M8 343 aa13.43□□□□□ -0.26
POLR2J3-219ENST00000608621 CYP4V2Q6ZWL3 525 aaPredicted RBP13.43□□□□□ -0.26
POLR2J3-219ENST00000608621 DPPA4Q7L190 304 aa13.43□□□□□ -0.26
POLR2J3-219ENST00000608621 JAMLQ86YT9 394 aa13.43□□□□□ -0.26
POLR2J3-219ENST00000608621 PELI3Q8N2H9 469 aa13.43□□□□□ -0.26
POLR2J3-219ENST00000608621 AOPEPQ8N6M6 819 aa13.43□□□□□ -0.26
POLR2J3-219ENST00000608621 NPWQ8N729 165 aa13.43□□□□□ -0.26
POLR2J3-219ENST00000608621 CCL4L1Q8NHW4 92 aa13.43□□□□□ -0.26
POLR2J3-219ENST00000608621 TMEM74Q96NL1 305 aa13.43□□□□□ -0.26
POLR2J3-219ENST00000608621 CCNL2Q96S94 520 aaPredicted RBP13.43□□□□□ -0.26
POLR2J3-219ENST00000608621 HAUS4Q9H6D7 363 aa13.43□□□□□ -0.26
POLR2J3-219ENST00000608621 CYP4F12Q9HCS2 524 aa13.43□□□□□ -0.26
POLR2J3-219ENST00000608621 CWC15Q9P013 229 aaKnown RBP13.43□□□□□ -0.26
POLR2J3-219ENST00000608621 APPL1Q9UKG1 709 aa13.43□□□□□ -0.26
POLR2J3-219ENST00000608621 ATXN7L1Q9ULK2 861 aaPredicted RBP13.43□□□□□ -0.26
POLR2J3-219ENST00000608621 PCDHGA7Q9Y5G6 932 aa13.43□□□□□ -0.26
POLR2J3-219ENST00000608621 LRRC53A6NM62 1247 aa13.42□□□□□ -0.26
POLR2J3-219ENST00000608621 AGRPO00253 132 aa13.42□□□□□ -0.26
POLR2J3-219ENST00000608621 NOBOXO60393 691 aa13.42□□□□□ -0.26
POLR2J3-219ENST00000608621 GZMAP12544 262 aa13.42□□□□□ -0.26
POLR2J3-219ENST00000608621 CCKBRP32239 447 aa13.42□□□□□ -0.26
POLR2J3-219ENST00000608621 RENBPP51606 427 aa13.42□□□□□ -0.26
POLR2J3-219ENST00000608621 ARHGEF7Q14155 803 aa13.42□□□□□ -0.26
POLR2J3-219ENST00000608621 LBRQ14739 615 aaKnown RBP13.42□□□□□ -0.26
POLR2J3-219ENST00000608621 ZNF571Q7Z3V5 609 aaPredicted RBP13.42□□□□□ -0.26
POLR2J3-219ENST00000608621 CCNJLQ8IV13 435 aa13.42□□□□□ -0.26
POLR2J3-219ENST00000608621 LZTR1Q8N653 840 aa13.42□□□□□ -0.26
POLR2J3-219ENST00000608621 PSKH2Q96QS6 385 aa13.42□□□□□ -0.26
POLR2J3-219ENST00000608621 DPEP2Q9H4A9 486 aa13.42□□□□□ -0.26
POLR2J3-219ENST00000608621 RTN4Q9NQC3 1192 aaKnown RBP13.42□□□□□ -0.26
POLR2J3-219ENST00000608621 LRIT1Q9P2V4 623 aa13.42□□□□□ -0.26
POLR2J3-219ENST00000608621 B4GALT6Q9UBX8 382 aa13.42□□□□□ -0.26
POLR2J3-219ENST00000608621 CNOT8Q9UFF9 292 aaKnown RBP13.42□□□□□ -0.26
POLR2J3-219ENST00000608621 SEPT3Q9UH03 358 aa13.42□□□□□ -0.26
POLR2J3-219ENST00000608621 PCDHGC4Q9Y5F7 938 aa13.42□□□□□ -0.26
POLR2J3-219ENST00000608621 RNF215Q9Y6U7 377 aa13.42□□□□□ -0.26
POLR2J3-219ENST00000608621 COL6A6A6NMZ7 2263 aa13.42□□□□□ -0.26
POLR2J3-219ENST00000608621 ARHGEF17Q96PE2 2063 aaPredicted RBP13.41□□□□□ -0.26
POLR2J3-219ENST00000608621 SETXQ7Z333 2677 aaKnown RBP13.41□□□□□ -0.26
POLR2J3-219ENST00000608621 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.41□□□□□ -0.26
POLR2J3-219ENST00000608621 B4DGG1 531 aa13.41□□□□□ -0.26
POLR2J3-219ENST00000608621 PDE2AO00408 941 aaPredicted RBP13.41□□□□□ -0.26
POLR2J3-219ENST00000608621 LRCH4O75427 683 aa13.41□□□□□ -0.26
POLR2J3-219ENST00000608621 JMJD7P0C870 316 aa13.41□□□□□ -0.26
POLR2J3-219ENST00000608621 PNLIPP16233 465 aa13.41□□□□□ -0.26
POLR2J3-219ENST00000608621 AMPD1P23109 780 aa13.41□□□□□ -0.26
POLR2J3-219ENST00000608621 ZNF135P52742 658 aaPredicted RBP13.41□□□□□ -0.26
POLR2J3-219ENST00000608621 AP1S1P61966 158 aa13.41□□□□□ -0.26
POLR2J3-219ENST00000608621 ZFP36L1Q07352 338 aaKnown RBP13.41□□□□□ -0.26
POLR2J3-219ENST00000608621 DPYSQ14117 519 aa13.41□□□□□ -0.26
POLR2J3-219ENST00000608621 HLTFQ14527 1009 aaKnown RBP eCLIP13.41□□□□□ -0.26
POLR2J3-219ENST00000608621 TGIF1Q15583 401 aa13.41□□□□□ -0.26
POLR2J3-219ENST00000608621 ASIC2Q16515 512 aa13.41□□□□□ -0.26
POLR2J3-219ENST00000608621 C14orf28Q4W4Y0 310 aa13.41□□□□□ -0.26
POLR2J3-219ENST00000608621 CERCAMQ5T4B2 595 aa13.41□□□□□ -0.26
POLR2J3-219ENST00000608621 DENND2CQ68D51 928 aa13.41□□□□□ -0.26
POLR2J3-219ENST00000608621 PSTKQ8IV42 348 aaKnown RBP13.41□□□□□ -0.26
POLR2J3-219ENST00000608621 FNIP1Q8TF40 1166 aa13.41□□□□□ -0.26
POLR2J3-219ENST00000608621 PDCD6IPQ8WUM4 868 aaKnown RBP13.41□□□□□ -0.26
POLR2J3-219ENST00000608621 COQ10AQ96MF6 247 aa13.41□□□□□ -0.26
POLR2J3-219ENST00000608621 ZNF599Q96NL3 588 aa13.41□□□□□ -0.26
POLR2J3-219ENST00000608621 GBP4Q96PP9 640 aa13.41□□□□□ -0.26
POLR2J3-219ENST00000608621 WDR26Q9H7D7 661 aa13.41□□□□□ -0.26
POLR2J3-219ENST00000608621 SPATS2LQ9NUQ6 558 aaKnown RBP13.41□□□□□ -0.26
POLR2J3-219ENST00000608621 MYO1AQ9UBC5 1043 aa13.41□□□□□ -0.26
POLR2J3-219ENST00000608621 PISDQ9UG56 409 aa13.41□□□□□ -0.26
POLR2J3-219ENST00000608621 FLNBO75369 2602 aaKnown RBP13.41□□□□□ -0.26
POLR2J3-219ENST00000608621 PIEZO2Q9H5I5 2752 aa13.4□□□□□ -0.26
POLR2J3-219ENST00000608621 AHCTF1Q8WYP5 2266 aa13.4□□□□□ -0.26
POLR2J3-219ENST00000608621 PRSS38A1L453 326 aa13.4□□□□□ -0.26
POLR2J3-219ENST00000608621 B8ZZF3 427 aa13.4□□□□□ -0.26
POLR2J3-219ENST00000608621 J3QKU1 62 aa13.4□□□□□ -0.26
POLR2J3-219ENST00000608621 DDX3XO00571 662 aaKnown RBP eCLIP13.4□□□□□ -0.26
POLR2J3-219ENST00000608621 NVLO15381 856 aaKnown RBP13.4□□□□□ -0.26
POLR2J3-219ENST00000608621 HTRA2O43464 458 aaPredicted RBP13.4□□□□□ -0.26
POLR2J3-219ENST00000608621 B4GAT1O43505 415 aa13.4□□□□□ -0.26
POLR2J3-219ENST00000608621 FUCA1P04066 466 aa13.4□□□□□ -0.26
POLR2J3-219ENST00000608621 ITIH1P19827 911 aa13.4□□□□□ -0.26
POLR2J3-219ENST00000608621 IL1R2P27930 398 aa13.4□□□□□ -0.26
POLR2J3-219ENST00000608621 B4GALNT1Q00973 533 aa13.4□□□□□ -0.26
POLR2J3-219ENST00000608621 ZNF235Q14590 738 aa13.4□□□□□ -0.26
POLR2J3-219ENST00000608621 CNGA3Q16281 694 aa13.4□□□□□ -0.26
POLR2J3-219ENST00000608621 TMCO4Q5TGY1 634 aa13.4□□□□□ -0.26
POLR2J3-219ENST00000608621 SPECC1LQ69YQ0 1117 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms