RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 TUBA1CQ9BQE3 449 aa4.42□□□□□ -1.7
HDDC2-207ENST00000608532 EVA1AQ9H8M9 152 aa4.42□□□□□ -1.7
HDDC2-207ENST00000608532 C17orf75Q9HAS0 396 aa4.42□□□□□ -1.7
HDDC2-207ENST00000608532 HCN3Q9P1Z3 774 aa4.42□□□□□ -1.7
HDDC2-207ENST00000608532 RRN3P2A6NIE6 340 aa4.41□□□□□ -1.7
HDDC2-207ENST00000608532 IFNL4K9M1U5 179 aa4.41□□□□□ -1.7
HDDC2-207ENST00000608532 TSPAN4O14817 238 aa4.41□□□□□ -1.7
HDDC2-207ENST00000608532 PLRG1O43660 514 aaKnown RBP4.41□□□□□ -1.7
HDDC2-207ENST00000608532 XPNPEP2O43895 674 aa4.41□□□□□ -1.7
HDDC2-207ENST00000608532 LMX1BO60663 402 aa4.41□□□□□ -1.7
HDDC2-207ENST00000608532 UMODP07911 640 aa4.41□□□□□ -1.7
HDDC2-207ENST00000608532 CYC1P08574 325 aa4.41□□□□□ -1.7
HDDC2-207ENST00000608532 IRF1P10914 325 aa4.41□□□□□ -1.7
HDDC2-207ENST00000608532 SRCP12931 536 aa4.41□□□□□ -1.7
HDDC2-207ENST00000608532 COX7A2P14406 83 aa4.41□□□□□ -1.7
HDDC2-207ENST00000608532 AGAP20933 346 aa4.41□□□□□ -1.7
HDDC2-207ENST00000608532 ZBTB17Q13105 803 aa4.41□□□□□ -1.7
HDDC2-207ENST00000608532 CAMK1Q14012 370 aa4.41□□□□□ -1.7
HDDC2-207ENST00000608532 ZRSR1Q15695 479 aaKnown RBP4.41□□□□□ -1.7
HDDC2-207ENST00000608532 CTF1Q16619 201 aa4.41□□□□□ -1.7
HDDC2-207ENST00000608532 DSTYKQ6XUX3 929 aa4.41□□□□□ -1.7
HDDC2-207ENST00000608532 C9orf139Q6ZV77 190 aa4.41□□□□□ -1.7
HDDC2-207ENST00000608532 SLC35F3Q8IY50 421 aa4.41□□□□□ -1.7
HDDC2-207ENST00000608532 MUC20Q8N307 709 aaPredicted RBP4.41□□□□□ -1.7
HDDC2-207ENST00000608532 ZBTB2Q8N680 514 aa4.41□□□□□ -1.7
HDDC2-207ENST00000608532 ZCCHC10Q8TBK6 192 aa4.41□□□□□ -1.7
HDDC2-207ENST00000608532 NR4A3Q92570 626 aa4.41□□□□□ -1.7
HDDC2-207ENST00000608532 APOPT1Q96IL0 206 aa4.41□□□□□ -1.7
HDDC2-207ENST00000608532 HAUS8Q9BT25 410 aa4.41□□□□□ -1.7
HDDC2-207ENST00000608532 GPR108Q9NPR9 543 aa4.41□□□□□ -1.7
HDDC2-207ENST00000608532 GGA3Q9NZ52 723 aa4.41□□□□□ -1.7
HDDC2-207ENST00000608532 FBXO9Q9UK97 447 aaPredicted RBP4.41□□□□□ -1.7
HDDC2-207ENST00000608532 A0A0B4J293 547 aa4.4□□□□□ -1.71
HDDC2-207ENST00000608532 GAGE10A6NGK3 116 aa4.4□□□□□ -1.71
HDDC2-207ENST00000608532 SNAP23O00161 211 aa4.4□□□□□ -1.71
HDDC2-207ENST00000608532 MID1O15344 667 aa4.4□□□□□ -1.71
HDDC2-207ENST00000608532 TFP02787 698 aa4.4□□□□□ -1.71
HDDC2-207ENST00000608532 KCNA5P22460 613 aa4.4□□□□□ -1.71
HDDC2-207ENST00000608532 SHMT1P34896 483 aa4.4□□□□□ -1.71
HDDC2-207ENST00000608532 ZNF132P52740 706 aa4.4□□□□□ -1.71
HDDC2-207ENST00000608532 BRWD1-AS2P59051 145 aa4.4□□□□□ -1.71
HDDC2-207ENST00000608532 KRTAP10-6P60371 365 aaPredicted RBP4.4□□□□□ -1.71
HDDC2-207ENST00000608532 SORDQ00796 357 aa4.4□□□□□ -1.71
HDDC2-207ENST00000608532 ECT2LQ008S8 904 aa4.4□□□□□ -1.71
HDDC2-207ENST00000608532 TLE2Q04725 743 aa4.4□□□□□ -1.71
HDDC2-207ENST00000608532 ARL16Q0P5N6 197 aa4.4□□□□□ -1.71
HDDC2-207ENST00000608532 DHX8Q14562 1220 aaKnown RBP4.4□□□□□ -1.71
HDDC2-207ENST00000608532 RNPS1Q15287 305 aaKnown RBP4.4□□□□□ -1.71
HDDC2-207ENST00000608532 SLC9B1Q4ZJI4 515 aa4.4□□□□□ -1.71
HDDC2-207ENST00000608532 SLC45A4Q5BKX6 768 aa4.4□□□□□ -1.71
HDDC2-207ENST00000608532 SGO1Q5FBB7 561 aa4.4□□□□□ -1.71
HDDC2-207ENST00000608532 STPG1Q5TH74 334 aa4.4□□□□□ -1.71
HDDC2-207ENST00000608532 IRAK1BP1Q5VVH5 260 aa4.4□□□□□ -1.71
HDDC2-207ENST00000608532 ANKRD54Q6NXT1 300 aa4.4□□□□□ -1.71
HDDC2-207ENST00000608532 KRBA2Q6ZNG9 492 aa4.4□□□□□ -1.71
HDDC2-207ENST00000608532 MTSS1LQ765P7 747 aa4.4□□□□□ -1.71
HDDC2-207ENST00000608532 ZNF771Q7L3S4 317 aaPredicted RBP4.4□□□□□ -1.71
HDDC2-207ENST00000608532 KCNH5Q8NCM2 988 aa4.4□□□□□ -1.71
HDDC2-207ENST00000608532 BEST2Q8NFU1 509 aa4.4□□□□□ -1.71
HDDC2-207ENST00000608532 FEM1CQ96JP0 617 aa4.4□□□□□ -1.71
HDDC2-207ENST00000608532 FUZQ9BT04 418 aa4.4□□□□□ -1.71
HDDC2-207ENST00000608532 NDST4Q9H3R1 872 aa4.4□□□□□ -1.71
HDDC2-207ENST00000608532 UBTD1Q9HAC8 227 aa4.4□□□□□ -1.71
HDDC2-207ENST00000608532 VEZTQ9HBM0 779 aa4.4□□□□□ -1.71
HDDC2-207ENST00000608532 MKKSQ9NPJ1 570 aaPredicted RBP4.4□□□□□ -1.71
HDDC2-207ENST00000608532 LUZP4Q9P127 313 aa4.4□□□□□ -1.71
HDDC2-207ENST00000608532 SLC25A10Q9UBX3 287 aaPredicted RBP4.4□□□□□ -1.71
HDDC2-207ENST00000608532 TINAGQ9UJW2 476 aa4.4□□□□□ -1.71
HDDC2-207ENST00000608532 TBX20Q9UMR3 447 aa4.4□□□□□ -1.71
HDDC2-207ENST00000608532 TMEM202A6NGA9 273 aa4.39□□□□□ -1.71
HDDC2-207ENST00000608532 BMPR1BO00238 502 aa4.39□□□□□ -1.71
HDDC2-207ENST00000608532 DDIT3P35638 169 aa4.39□□□□□ -1.71
HDDC2-207ENST00000608532 PAFAH1B1P43034 410 aa4.39□□□□□ -1.71
HDDC2-207ENST00000608532 GNAQP50148 359 aa4.39□□□□□ -1.71
HDDC2-207ENST00000608532 ILF3Q12906 894 aaKnown RBP eCLIP4.39□□□□□ -1.71
HDDC2-207ENST00000608532 ZRSR2Q15696 482 aaKnown RBP4.39□□□□□ -1.71
HDDC2-207ENST00000608532 C2orf68Q2NKX9 166 aa4.39□□□□□ -1.71
HDDC2-207ENST00000608532 OTUD3Q5T2D3 398 aaPredicted RBP4.39□□□□□ -1.71
HDDC2-207ENST00000608532 HIST2H2BCQ6DN03 193 aa4.39□□□□□ -1.71
HDDC2-207ENST00000608532 HIST2H2BDQ6DRA6 164 aa4.39□□□□□ -1.71
HDDC2-207ENST00000608532 RGMBQ6NW40 437 aa4.39□□□□□ -1.71
HDDC2-207ENST00000608532 FAM122CQ6P4D5 195 aa4.39□□□□□ -1.71
HDDC2-207ENST00000608532 GDPD4Q6W3E5 623 aa4.39□□□□□ -1.71
HDDC2-207ENST00000608532 TAOK1Q7L7X3 1001 aa4.39□□□□□ -1.71
HDDC2-207ENST00000608532 LINGO2Q7L985 606 aa4.39□□□□□ -1.71
HDDC2-207ENST00000608532 ODF3L1Q8IXM7 274 aa4.39□□□□□ -1.71
HDDC2-207ENST00000608532 CPXCR1Q8N123 301 aa4.39□□□□□ -1.71
HDDC2-207ENST00000608532 LMNTD1Q8N9Z9 388 aa4.39□□□□□ -1.71
HDDC2-207ENST00000608532 ZBTB8BQ8NAP8 495 aaPredicted RBP4.39□□□□□ -1.71
HDDC2-207ENST00000608532 MYRIPQ8NFW9 859 aa4.39□□□□□ -1.71
HDDC2-207ENST00000608532 HUS1BQ8NHY5 278 aa4.39□□□□□ -1.71
HDDC2-207ENST00000608532 USP13Q92995 863 aaPredicted RBP4.39□□□□□ -1.71
HDDC2-207ENST00000608532 PABPC5Q96DU9 382 aaKnown RBP4.39□□□□□ -1.71
HDDC2-207ENST00000608532 H2AFJQ9BTM1 129 aa4.39□□□□□ -1.71
HDDC2-207ENST00000608532 TKTL2Q9H0I9 626 aa4.39□□□□□ -1.71
HDDC2-207ENST00000608532 ESRP2Q9H6T0 727 aaKnown RBP4.39□□□□□ -1.71
HDDC2-207ENST00000608532 SDF2L1Q9HCN8 221 aa4.39□□□□□ -1.71
HDDC2-207ENST00000608532 STON1Q9Y6Q2 735 aa4.39□□□□□ -1.71
HDDC2-207ENST00000608532 ZNF587BE7ETH6 402 aa4.38□□□□□ -1.71
HDDC2-207ENST00000608532 SEC14L5O43304 696 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms