RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 SLC5A2P31639 672 aa19.37■□□□□ 0.69
SGMS1-208ENST00000608287 MESDQ14696 234 aa19.37■□□□□ 0.69
SGMS1-208ENST00000608287 ZNF805Q5CZA5 627 aa19.37■□□□□ 0.69
SGMS1-208ENST00000608287 MANEAQ5SRI9 462 aa19.37■□□□□ 0.69
SGMS1-208ENST00000608287 GCNT7Q6ZNI0 430 aa19.37■□□□□ 0.69
SGMS1-208ENST00000608287 PARS2Q7L3T8 475 aaKnown RBP19.37■□□□□ 0.69
SGMS1-208ENST00000608287 JAMLQ86YT9 394 aa19.37■□□□□ 0.69
SGMS1-208ENST00000608287 FBXO39Q8N4B4 442 aa19.37■□□□□ 0.69
SGMS1-208ENST00000608287 KLHL32Q96NJ5 620 aa19.37■□□□□ 0.69
SGMS1-208ENST00000608287 OSBPL1AQ9BXW6 950 aa19.37■□□□□ 0.69
SGMS1-208ENST00000608287 ETNK2Q9NVF9 386 aa19.37■□□□□ 0.69
SGMS1-208ENST00000608287 GEMIN8Q9NWZ8 242 aaKnown RBP19.37■□□□□ 0.69
SGMS1-208ENST00000608287 SPASTQ9UBP0 616 aa19.37■□□□□ 0.69
SGMS1-208ENST00000608287 LHX3Q9UBR4 397 aa19.37■□□□□ 0.69
SGMS1-208ENST00000608287 PCDHB11Q9Y5F2 797 aa19.37■□□□□ 0.69
SGMS1-208ENST00000608287 RP1P56715 2156 aa19.36■□□□□ 0.69
SGMS1-208ENST00000608287 C16orf96A6NNT2 1141 aa19.36■□□□□ 0.69
SGMS1-208ENST00000608287 PALMO75781 387 aa19.36■□□□□ 0.69
SGMS1-208ENST00000608287 CR2P20023 1033 aa19.36■□□□□ 0.69
SGMS1-208ENST00000608287 TAS2R40P59535 323 aa19.36■□□□□ 0.69
SGMS1-208ENST00000608287 MMRN1Q13201 1228 aa19.36■□□□□ 0.69
SGMS1-208ENST00000608287 ATP13A4Q4VNC1 1196 aa19.36■□□□□ 0.69
SGMS1-208ENST00000608287 KIAA1161Q6NSJ0 714 aa19.36■□□□□ 0.69
SGMS1-208ENST00000608287 ESRP1Q6NXG1 681 aaKnown RBP19.36■□□□□ 0.69
SGMS1-208ENST00000608287 GDPD4Q6W3E5 623 aa19.36■□□□□ 0.69
SGMS1-208ENST00000608287 ARHGAP36Q6ZRI8 547 aa19.36■□□□□ 0.69
SGMS1-208ENST00000608287 TP53INP2Q8IXH6 220 aa19.36■□□□□ 0.69
SGMS1-208ENST00000608287 RHOT2Q8IXI1 618 aa19.36■□□□□ 0.69
SGMS1-208ENST00000608287 KLK6Q92876 244 aa19.36■□□□□ 0.69
SGMS1-208ENST00000608287 GPR27Q9NS67 375 aa19.36■□□□□ 0.69
SGMS1-208ENST00000608287 COL12A1Q99715 3063 aa19.36■□□□□ 0.69
SGMS1-208ENST00000608287 MUSKO15146 869 aa19.35■□□□□ 0.69
SGMS1-208ENST00000608287 CD48P09326 243 aa19.35■□□□□ 0.69
SGMS1-208ENST00000608287 MAN1A1P33908 653 aa19.35■□□□□ 0.69
SGMS1-208ENST00000608287 RPS21P63220 83 aaKnown RBP19.35■□□□□ 0.69
SGMS1-208ENST00000608287 IL10RBQ08334 325 aa19.35■□□□□ 0.69
SGMS1-208ENST00000608287 ZFYVE27Q5T4F4 411 aa19.35■□□□□ 0.69
SGMS1-208ENST00000608287 RAB11FIP2Q7L804 512 aa19.35■□□□□ 0.69
SGMS1-208ENST00000608287 KCTD6Q8NC69 237 aa19.35■□□□□ 0.69
SGMS1-208ENST00000608287 TMEM159Q96B96 161 aa19.35■□□□□ 0.69
SGMS1-208ENST00000608287 TBATAQ96M53 351 aa19.35■□□□□ 0.69
SGMS1-208ENST00000608287 CINPQ9BW66 212 aaPredicted RBP19.35■□□□□ 0.69
SGMS1-208ENST00000608287 BOCQ9BWV1 1114 aa19.35■□□□□ 0.69
SGMS1-208ENST00000608287 SYNDIG1Q9H7V2 258 aa19.35■□□□□ 0.69
SGMS1-208ENST00000608287 FZD3Q9NPG1 666 aa19.35■□□□□ 0.69
SGMS1-208ENST00000608287 RCOR3Q9P2K3 495 aaPredicted RBP19.35■□□□□ 0.69
SGMS1-208ENST00000608287 MYO9AB2RTY4 2548 aa19.35■□□□□ 0.69
SGMS1-208ENST00000608287 SPTAN1Q13813 2472 aaKnown RBP19.35■□□□□ 0.69
SGMS1-208ENST00000608287 TRPM6Q9BX84 2022 aa19.35■□□□□ 0.69
SGMS1-208ENST00000608287 TEX15Q9BXT5 2789 aa19.35■□□□□ 0.69
SGMS1-208ENST00000608287 NVLO15381 856 aaKnown RBP19.34■□□□□ 0.69
SGMS1-208ENST00000608287 INSIG1O15503 277 aa19.34■□□□□ 0.69
SGMS1-208ENST00000608287 KRT7P08729 469 aa19.34■□□□□ 0.69
SGMS1-208ENST00000608287 JMJD7P0C870 316 aa19.34■□□□□ 0.69
SGMS1-208ENST00000608287 JUNDP17535 347 aa19.34■□□□□ 0.69
SGMS1-208ENST00000608287 SERPINB6P35237 376 aa19.34■□□□□ 0.69
SGMS1-208ENST00000608287 CLDN2P57739 230 aa19.34■□□□□ 0.69
SGMS1-208ENST00000608287 FZD2Q14332 565 aa19.34■□□□□ 0.69
SGMS1-208ENST00000608287 ZNF542PQ5EBM4 170 aa19.34■□□□□ 0.69
SGMS1-208ENST00000608287 TSEN2Q8NCE0 465 aaKnown RBP19.34■□□□□ 0.69
SGMS1-208ENST00000608287 FAM71BQ8TC56 605 aa19.34■□□□□ 0.69
SGMS1-208ENST00000608287 LMX1AQ8TE12 382 aa19.34■□□□□ 0.69
SGMS1-208ENST00000608287 VOPP1Q96AW1 172 aa19.34■□□□□ 0.69
SGMS1-208ENST00000608287 TMEM74Q96NL1 305 aa19.34■□□□□ 0.69
SGMS1-208ENST00000608287 CCDC3Q9BQI4 270 aa19.34■□□□□ 0.69
SGMS1-208ENST00000608287 INTUQ9ULD6 942 aa19.34■□□□□ 0.69
SGMS1-208ENST00000608287 FADS3Q9Y5Q0 445 aa19.34■□□□□ 0.69
SGMS1-208ENST00000608287 ENO4A6NNW6 628 aa19.33■□□□□ 0.68
SGMS1-208ENST00000608287 NEMP1O14524 444 aa19.33■□□□□ 0.68
SGMS1-208ENST00000608287 FPGTO14772 594 aa19.33■□□□□ 0.68
SGMS1-208ENST00000608287 AP1G1O43747 822 aa19.33■□□□□ 0.68
SGMS1-208ENST00000608287 IL4RP24394 825 aa19.33■□□□□ 0.68
SGMS1-208ENST00000608287 CD82P27701 267 aa19.33■□□□□ 0.68
SGMS1-208ENST00000608287 UGT1A5P35504 534 aa19.33■□□□□ 0.68
SGMS1-208ENST00000608287 ARHGAP25P42331 645 aa19.33■□□□□ 0.68
SGMS1-208ENST00000608287 ABL2P42684 1182 aa19.33■□□□□ 0.68
SGMS1-208ENST00000608287 MAGEA1P43355 309 aa19.33■□□□□ 0.68
SGMS1-208ENST00000608287 ARSEP51690 589 aa19.33■□□□□ 0.68
SGMS1-208ENST00000608287 DPYSL3Q14195 570 aa19.33■□□□□ 0.68
SGMS1-208ENST00000608287 PTK2BQ14289 1009 aa19.33■□□□□ 0.68
SGMS1-208ENST00000608287 RFTN1Q14699 578 aaPredicted RBP19.33■□□□□ 0.68
SGMS1-208ENST00000608287 PDK2Q15119 407 aa19.33■□□□□ 0.68
SGMS1-208ENST00000608287 DEFB133Q30KQ1 61 aa19.33■□□□□ 0.68
SGMS1-208ENST00000608287 C4orf17Q53FE4 359 aa19.33■□□□□ 0.68
SGMS1-208ENST00000608287 SEL1L3Q68CR1 1132 aa19.33■□□□□ 0.68
SGMS1-208ENST00000608287 CRTC1Q6UUV9 634 aa19.33■□□□□ 0.68
SGMS1-208ENST00000608287 MAP7D3Q8IWC1 876 aa19.33■□□□□ 0.68
SGMS1-208ENST00000608287 ATPAF2Q8N5M1 289 aa19.33■□□□□ 0.68
SGMS1-208ENST00000608287 RAB7BQ96AH8 199 aa19.33■□□□□ 0.68
SGMS1-208ENST00000608287 FEM1CQ96JP0 617 aa19.33■□□□□ 0.68
SGMS1-208ENST00000608287 CPEB1Q9BZB8 566 aaKnown RBP19.33■□□□□ 0.68
SGMS1-208ENST00000608287 EPB41L5Q9HCM4 733 aa19.33■□□□□ 0.68
SGMS1-208ENST00000608287 ZFR2Q9UPR6 939 aaKnown RBP19.33■□□□□ 0.68
SGMS1-208ENST00000608287 PCDHGA4Q9Y5G9 962 aa19.33■□□□□ 0.68
SGMS1-208ENST00000608287 BOD1L1Q8NFC6 3051 aa19.33■□□□□ 0.68
SGMS1-208ENST00000608287 FLNCQ14315 2725 aa19.32■□□□□ 0.68
SGMS1-208ENST00000608287 MTA2O94776 668 aa19.32■□□□□ 0.68
SGMS1-208ENST00000608287 PIGNO95427 931 aa19.32■□□□□ 0.68
SGMS1-208ENST00000608287 ANXA6P08133 673 aa19.32■□□□□ 0.68
SGMS1-208ENST00000608287 CYLC1P35663 651 aaPredicted RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms