RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 FTLP02792 175 aaPredicted RBP12.37□□□□□ -0.43
HLA-F-230ENST00000606273 PDGFAP04085 211 aa12.37□□□□□ -0.43
HLA-F-230ENST00000606273 CALB1P05937 261 aa12.37□□□□□ -0.43
HLA-F-230ENST00000606273 LIPCP11150 499 aa12.37□□□□□ -0.43
HLA-F-230ENST00000606273 GZMAP12544 262 aa12.37□□□□□ -0.43
HLA-F-230ENST00000606273 PCSK2P16519 638 aa12.37□□□□□ -0.43
HLA-F-230ENST00000606273 RFC1P35251 1148 aaPredicted RBP12.37□□□□□ -0.43
HLA-F-230ENST00000606273 UGT1A5P35504 534 aa12.37□□□□□ -0.43
HLA-F-230ENST00000606273 GSCP56915 257 aaPredicted RBP12.37□□□□□ -0.43
HLA-F-230ENST00000606273 RIPPLY3P57055 190 aa12.37□□□□□ -0.43
HLA-F-230ENST00000606273 TBX4P57082 545 aa12.37□□□□□ -0.43
HLA-F-230ENST00000606273 RPL7AP62424 266 aaKnown RBP12.37□□□□□ -0.43
HLA-F-230ENST00000606273 OGDHQ02218 1023 aa12.37□□□□□ -0.43
HLA-F-230ENST00000606273 MANEAQ5SRI9 462 aa12.37□□□□□ -0.43
HLA-F-230ENST00000606273 RFWD3Q6PCD5 774 aa12.37□□□□□ -0.43
HLA-F-230ENST00000606273 MFN1Q8IWA4 741 aa12.37□□□□□ -0.43
HLA-F-230ENST00000606273 DRC7Q8IY82 874 aa12.37□□□□□ -0.43
HLA-F-230ENST00000606273 SLC22A18ASQ8N1D0 253 aa12.37□□□□□ -0.43
HLA-F-230ENST00000606273 FBXO39Q8N4B4 442 aa12.37□□□□□ -0.43
HLA-F-230ENST00000606273 ZNF557Q8N988 423 aaPredicted RBP12.37□□□□□ -0.43
HLA-F-230ENST00000606273 SPC24Q8NBT2 197 aa12.37□□□□□ -0.43
HLA-F-230ENST00000606273 NT5C3BQ969T7 300 aa12.37□□□□□ -0.43
HLA-F-230ENST00000606273 MYEOVQ96EZ4 313 aa12.37□□□□□ -0.43
HLA-F-230ENST00000606273 CFAP57Q96MR6 1250 aa12.37□□□□□ -0.43
HLA-F-230ENST00000606273 TBCBQ99426 244 aa12.37□□□□□ -0.43
HLA-F-230ENST00000606273 NPY6RQ99463 290 aa12.37□□□□□ -0.43
HLA-F-230ENST00000606273 CALN1Q9BXU9 219 aa12.37□□□□□ -0.43
HLA-F-230ENST00000606273 PACSIN1Q9BY11 444 aa12.37□□□□□ -0.43
HLA-F-230ENST00000606273 ANLNQ9NQW6 1124 aa12.37□□□□□ -0.43
HLA-F-230ENST00000606273 COX16Q9P0S2 106 aa12.37□□□□□ -0.43
HLA-F-230ENST00000606273 XPO7Q9UIA9 1087 aaKnown RBP12.37□□□□□ -0.43
HLA-F-230ENST00000606273 ANAPC2Q9UJX6 822 aa12.37□□□□□ -0.43
HLA-F-230ENST00000606273 PLAAQ9Y263 795 aa12.37□□□□□ -0.43
HLA-F-230ENST00000606273 HBS1LQ9Y450 684 aaKnown RBP12.37□□□□□ -0.43
HLA-F-230ENST00000606273 BZW2Q9Y6E2 419 aaKnown RBP12.37□□□□□ -0.43
HLA-F-230ENST00000606273 TP53BP1Q12888 1972 aaPredicted RBP12.37□□□□□ -0.43
HLA-F-230ENST00000606273 H3BRJ5 948 aa12.36□□□□□ -0.43
HLA-F-230ENST00000606273 NVLO15381 856 aaKnown RBP12.36□□□□□ -0.43
HLA-F-230ENST00000606273 SLC31A1O15431 190 aa12.36□□□□□ -0.43
HLA-F-230ENST00000606273 GSC2O15499 205 aa12.36□□□□□ -0.43
HLA-F-230ENST00000606273 SLC6A4P31645 630 aa12.36□□□□□ -0.43
HLA-F-230ENST00000606273 SULT1E1P49888 294 aa12.36□□□□□ -0.43
HLA-F-230ENST00000606273 SNX16P57768 344 aa12.36□□□□□ -0.43
HLA-F-230ENST00000606273 HNRNPKP61978 463 aaKnown RBP eCLIP12.36□□□□□ -0.43
HLA-F-230ENST00000606273 EIF3IQ13347 325 aaKnown RBP12.36□□□□□ -0.43
HLA-F-230ENST00000606273 ELAVL3Q14576 367 aaKnown RBP12.36□□□□□ -0.43
HLA-F-230ENST00000606273 C15orf59Q2T9L4 293 aaPredicted RBP12.36□□□□□ -0.43
HLA-F-230ENST00000606273 CCDC14Q49A88 953 aa12.36□□□□□ -0.43
HLA-F-230ENST00000606273 ZC3H12AQ5D1E8 599 aaKnown RBP12.36□□□□□ -0.43
HLA-F-230ENST00000606273 FSCBQ5H9T9 825 aa12.36□□□□□ -0.43
HLA-F-230ENST00000606273 NADSYN1Q6IA69 706 aa12.36□□□□□ -0.43
HLA-F-230ENST00000606273 PLEKHA7Q6IQ23 1121 aa12.36□□□□□ -0.43
HLA-F-230ENST00000606273 BNIPLQ7Z465 357 aa12.36□□□□□ -0.43
HLA-F-230ENST00000606273 VASH2Q86V25 355 aa12.36□□□□□ -0.43
HLA-F-230ENST00000606273 JAMLQ86YT9 394 aa12.36□□□□□ -0.43
HLA-F-230ENST00000606273 CNGA4Q8IV77 575 aa12.36□□□□□ -0.43
HLA-F-230ENST00000606273 C3orf20Q8ND61 904 aa12.36□□□□□ -0.43
HLA-F-230ENST00000606273 WDR48Q8TAF3 677 aa12.36□□□□□ -0.43
HLA-F-230ENST00000606273 RXFP2Q8WXD0 754 aa12.36□□□□□ -0.43
HLA-F-230ENST00000606273 UTP4Q969X6 686 aaKnown RBP12.36□□□□□ -0.43
HLA-F-230ENST00000606273 FAM46AQ96IP4 442 aaKnown RBP12.36□□□□□ -0.43
HLA-F-230ENST00000606273 SERPINB11Q96P15 392 aa12.36□□□□□ -0.43
HLA-F-230ENST00000606273 MYOCQ99972 504 aa12.36□□□□□ -0.43
HLA-F-230ENST00000606273 TRIM7Q9C029 511 aa12.36□□□□□ -0.43
HLA-F-230ENST00000606273 NHEJ1Q9H9Q4 299 aaPredicted RBP12.36□□□□□ -0.43
HLA-F-230ENST00000606273 PIGVQ9NUD9 493 aa12.36□□□□□ -0.43
HLA-F-230ENST00000606273 SPTLC3Q9NUV7 552 aa12.36□□□□□ -0.43
HLA-F-230ENST00000606273 DNAJC28Q9NX36 388 aa12.36□□□□□ -0.43
HLA-F-230ENST00000606273 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.36□□□□□ -0.43
HLA-F-230ENST00000606273 SEPT10Q9P0V9 454 aa12.36□□□□□ -0.43
HLA-F-230ENST00000606273 SARDHQ9UL12 918 aa12.36□□□□□ -0.43
HLA-F-230ENST00000606273 CSNK1G3Q9Y6M4 447 aa12.36□□□□□ -0.43
HLA-F-230ENST00000606273 CREBBPQ92793 2442 aa12.36□□□□□ -0.43
HLA-F-230ENST00000606273 SSU72P8A0A1W2PR75 194 aa12.35□□□□□ -0.43
HLA-F-230ENST00000606273 C2CD4BA6NLJ0 364 aa12.35□□□□□ -0.43
HLA-F-230ENST00000606273 SIGLEC16A6NMB1 481 aa12.35□□□□□ -0.43
HLA-F-230ENST00000606273 M0QYT0 321 aa12.35□□□□□ -0.43
HLA-F-230ENST00000606273 TPM1P09493 284 aa12.35□□□□□ -0.43
HLA-F-230ENST00000606273 KRT3P12035 628 aa12.35□□□□□ -0.43
HLA-F-230ENST00000606273 PRLRP16471 622 aa12.35□□□□□ -0.43
HLA-F-230ENST00000606273 MPSTP25325 297 aa12.35□□□□□ -0.43
HLA-F-230ENST00000606273 CDK17Q00537 523 aa12.35□□□□□ -0.43
HLA-F-230ENST00000606273 ECT2LQ008S8 904 aa12.35□□□□□ -0.43
HLA-F-230ENST00000606273 CNTN1Q12860 1018 aa12.35□□□□□ -0.43
HLA-F-230ENST00000606273 NME3Q13232 169 aa12.35□□□□□ -0.43
HLA-F-230ENST00000606273 KCNAB2Q13303 367 aa12.35□□□□□ -0.43
HLA-F-230ENST00000606273 MAMLD1Q13495 774 aa12.35□□□□□ -0.43
HLA-F-230ENST00000606273 FAM133BQ5BKY9 247 aaKnown RBP12.35□□□□□ -0.43
HLA-F-230ENST00000606273 PITRM1Q5JRX3 1037 aa12.35□□□□□ -0.43
HLA-F-230ENST00000606273 CCDC122Q5T0U0 273 aa12.35□□□□□ -0.43
HLA-F-230ENST00000606273 AGBL4Q5VU57 503 aa12.35□□□□□ -0.43
HLA-F-230ENST00000606273 ALKBH5Q6P6C2 394 aaKnown RBP12.35□□□□□ -0.43
HLA-F-230ENST00000606273 BORAQ6PGQ7 559 aa12.35□□□□□ -0.43
HLA-F-230ENST00000606273 RAB11FIP2Q7L804 512 aa12.35□□□□□ -0.43
HLA-F-230ENST00000606273 MSANTD4Q8NCY6 345 aa12.35□□□□□ -0.43
HLA-F-230ENST00000606273 ZNF548Q8NEK5 533 aaPredicted RBP12.35□□□□□ -0.43
HLA-F-230ENST00000606273 KLK6Q92876 244 aa12.35□□□□□ -0.43
HLA-F-230ENST00000606273 ZNF653Q96CK0 615 aa12.35□□□□□ -0.43
HLA-F-230ENST00000606273 ARHGEF26Q96DR7 871 aa12.35□□□□□ -0.43
HLA-F-230ENST00000606273 RPL10LQ96L21 214 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms