RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 ECHDC3Q96DC8 303 aa21.3■■□□□ 1
PPFIA3-209ENST00000602783 DPH1Q9BZG8 443 aa21.3■■□□□ 1
PPFIA3-209ENST00000602783 CPNE5Q9HCH3 593 aa21.3■■□□□ 1
PPFIA3-209ENST00000602783 ETNK2Q9NVF9 386 aa21.3■■□□□ 1
PPFIA3-209ENST00000602783 PCDHGA8Q9Y5G5 932 aa21.3■■□□□ 1
PPFIA3-209ENST00000602783 PMS2P1A4D2B8 440 aa21.29■■□□□ 1
PPFIA3-209ENST00000602783 A8MX80 341 aa21.29■■□□□ 1
PPFIA3-209ENST00000602783 NTN3O00634 580 aaPredicted RBP21.29■■□□□ 1
PPFIA3-209ENST00000602783 RARAP10276 462 aa21.29■■□□□ 1
PPFIA3-209ENST00000602783 UCNP55089 124 aa21.29■■□□□ 1
PPFIA3-209ENST00000602783 TMPRSS3P57727 454 aa21.29■■□□□ 1
PPFIA3-209ENST00000602783 POLR2LP62875 67 aaKnown RBP21.29■■□□□ 1
PPFIA3-209ENST00000602783 SLC25A11Q02978 314 aaKnown RBP21.29■■□□□ 1
PPFIA3-209ENST00000602783 RALGDSQ12967 914 aa21.29■■□□□ 1
PPFIA3-209ENST00000602783 BOLA3Q53S33 107 aa21.29■■□□□ 1
PPFIA3-209ENST00000602783 CCDC122Q5T0U0 273 aa21.29■■□□□ 1
PPFIA3-209ENST00000602783 ARHGAP40Q5TG30 622 aa21.29■■□□□ 1
PPFIA3-209ENST00000602783 KCTD16Q68DU8 428 aa21.29■■□□□ 1
PPFIA3-209ENST00000602783 ALKBH5Q6P6C2 394 aaKnown RBP21.29■■□□□ 1
PPFIA3-209ENST00000602783 POLNQ7Z5Q5 900 aa21.29■■□□□ 1
PPFIA3-209ENST00000602783 LZTR1Q8N653 840 aa21.29■■□□□ 1
PPFIA3-209ENST00000602783 CCDC74AQ96AQ1 378 aa21.29■■□□□ 1
PPFIA3-209ENST00000602783 IP6K2Q9UHH9 426 aa21.29■■□□□ 1
PPFIA3-209ENST00000602783 RABGEF1Q9UJ41 708 aa21.29■■□□□ 1
PPFIA3-209ENST00000602783 TRAFD1O14545 582 aaPredicted RBP21.28■■□□□ 1
PPFIA3-209ENST00000602783 TPM3P06753 285 aa21.28■■□□□ 1
PPFIA3-209ENST00000602783 ELFN1P0C7U0 828 aa21.28■■□□□ 1
PPFIA3-209ENST00000602783 AMPD1P23109 780 aa21.28■■□□□ 1
PPFIA3-209ENST00000602783 RENBPP51606 427 aa21.28■■□□□ 1
PPFIA3-209ENST00000602783 PDX1P52945 283 aa21.28■■□□□ 1
PPFIA3-209ENST00000602783 SKOR2Q2VWA4 1001 aaPredicted RBP21.28■■□□□ 1
PPFIA3-209ENST00000602783 TMCO3Q6UWJ1 677 aa21.28■■□□□ 1
PPFIA3-209ENST00000602783 ARL14Q8N4G2 192 aa21.28■■□□□ 1
PPFIA3-209ENST00000602783 TEKT4Q8WW24 435 aa21.28■■□□□ 1
PPFIA3-209ENST00000602783 OR1E3Q8WZA6 343 aa21.28■■□□□ 1
PPFIA3-209ENST00000602783 FUBP1Q96AE4 644 aaKnown RBP21.28■■□□□ 1
PPFIA3-209ENST00000602783 PDXPQ96GD0 296 aa21.28■■□□□ 1
PPFIA3-209ENST00000602783 NSMCE3Q96MG7 304 aa21.28■■□□□ 1
PPFIA3-209ENST00000602783 CSPG4P5Q96PW8 444 aa21.28■■□□□ 1
PPFIA3-209ENST00000602783 PCDH18Q9HCL0 1135 aa21.28■■□□□ 1
PPFIA3-209ENST00000602783 SEPT3Q9UH03 358 aa21.28■■□□□ 1
PPFIA3-209ENST00000602783 DGKBQ9Y6T7 804 aa21.28■■□□□ 1
PPFIA3-209ENST00000602783 CCDC187A0A096LP49 1063 aa21.27■■□□□ 1
PPFIA3-209ENST00000602783 TTC24A2A3L6 582 aaPredicted RBP21.27■■□□□ 1
PPFIA3-209ENST00000602783 TMEM202A6NGA9 273 aa21.27■■□□□ 1
PPFIA3-209ENST00000602783 CACNB4O00305 520 aaPredicted RBP21.27■■□□□ 1
PPFIA3-209ENST00000602783 C1QL1O75973 258 aa21.27■■□□□ 1
PPFIA3-209ENST00000602783 TNFSF15O95150 251 aa21.27■■□□□ 1
PPFIA3-209ENST00000602783 KIAA1024LP59773 190 aa21.27■■□□□ 1
PPFIA3-209ENST00000602783 AP1S1P61966 158 aa21.27■■□□□ 1
PPFIA3-209ENST00000602783 CCL7P80098 99 aa21.27■■□□□ 1
PPFIA3-209ENST00000602783 SLC10A7Q0GE19 358 aa21.27■■□□□ 1
PPFIA3-209ENST00000602783 LBRQ14739 615 aaKnown RBP21.27■■□□□ 1
PPFIA3-209ENST00000602783 TMCO4Q5TGY1 634 aa21.27■■□□□ 1
PPFIA3-209ENST00000602783 DPPA4Q7L190 304 aa21.27■■□□□ 1
PPFIA3-209ENST00000602783 OR56A4Q8NGH8 313 aa21.27■■□□□ 1
PPFIA3-209ENST00000602783 PSKH2Q96QS6 385 aa21.27■■□□□ 1
PPFIA3-209ENST00000602783 GFM1Q96RP9 751 aaKnown RBP21.27■■□□□ 1
PPFIA3-209ENST00000602783 RBM15Q96T37 977 aaKnown RBP eCLIP21.27■■□□□ 1
PPFIA3-209ENST00000602783 MRPL40Q9NQ50 206 aaKnown RBP21.27■■□□□ 1
PPFIA3-209ENST00000602783 NENFQ9UMX5 172 aa21.27■■□□□ 1
PPFIA3-209ENST00000602783 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.27■■□□□ 1
PPFIA3-209ENST00000602783 CDRT15L2A8MXV6 281 aa21.26■□□□□ 0.99
PPFIA3-209ENST00000602783 ACOX1Q15067 660 aa21.26■□□□□ 0.99
PPFIA3-209ENST00000602783 PCSK4Q6UW60 755 aa21.26■□□□□ 0.99
PPFIA3-209ENST00000602783 TAF8Q7Z7C8 310 aa21.26■□□□□ 0.99
PPFIA3-209ENST00000602783 B3GNT8Q7Z7M8 397 aa21.26■□□□□ 0.99
PPFIA3-209ENST00000602783 OR6C4Q8NGE1 309 aa21.26■□□□□ 0.99
PPFIA3-209ENST00000602783 ZNF564Q8TBZ8 553 aaPredicted RBP21.26■□□□□ 0.99
PPFIA3-209ENST00000602783 CCDC97Q96F63 343 aaPredicted RBP21.26■□□□□ 0.99
PPFIA3-209ENST00000602783 ZNF599Q96NL3 588 aa21.26■□□□□ 0.99
PPFIA3-209ENST00000602783 FGF22Q9HCT0 170 aa21.26■□□□□ 0.99
PPFIA3-209ENST00000602783 MOSPD1Q9UJG1 213 aa21.26■□□□□ 0.99
PPFIA3-209ENST00000602783 KALRNO60229 2985 aa21.26■□□□□ 0.99
PPFIA3-209ENST00000602783 GCN1Q92616 2671 aaKnown RBP21.25■□□□□ 0.99
PPFIA3-209ENST00000602783 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.25■□□□□ 0.99
PPFIA3-209ENST00000602783 A0A1W2PQM1 296 aa21.25■□□□□ 0.99
PPFIA3-209ENST00000602783 MYO1FO00160 1098 aa21.25■□□□□ 0.99
PPFIA3-209ENST00000602783 RPLP0P05388 317 aaKnown RBP21.25■□□□□ 0.99
PPFIA3-209ENST00000602783 GM2AP17900 193 aa21.25■□□□□ 0.99
PPFIA3-209ENST00000602783 KELP23276 732 aa21.25■□□□□ 0.99
PPFIA3-209ENST00000602783 HNRNPH3P31942 346 aaKnown RBP21.25■□□□□ 0.99
PPFIA3-209ENST00000602783 TRIM23P36406 574 aa21.25■□□□□ 0.99
PPFIA3-209ENST00000602783 SSR1P43307 286 aaKnown RBP21.25■□□□□ 0.99
PPFIA3-209ENST00000602783 SKOR1P84550 965 aa21.25■□□□□ 0.99
PPFIA3-209ENST00000602783 KRT81Q14533 505 aa21.25■□□□□ 0.99
PPFIA3-209ENST00000602783 ZNF235Q14590 738 aa21.25■□□□□ 0.99
PPFIA3-209ENST00000602783 TAF1BQ53T94 588 aaPredicted RBP21.25■□□□□ 0.99
PPFIA3-209ENST00000602783 ATPAF2Q8N5M1 289 aa21.25■□□□□ 0.99
PPFIA3-209ENST00000602783 FAM46DQ8NEK8 389 aa21.25■□□□□ 0.99
PPFIA3-209ENST00000602783 GPR156Q8NFN8 814 aa21.25■□□□□ 0.99
PPFIA3-209ENST00000602783 LIN37Q96GY3 246 aaPredicted RBP21.25■□□□□ 0.99
PPFIA3-209ENST00000602783 LGR4Q9BXB1 951 aa21.25■□□□□ 0.99
PPFIA3-209ENST00000602783 EPB41L5Q9HCM4 733 aa21.25■□□□□ 0.99
PPFIA3-209ENST00000602783 B4GALT6Q9UBX8 382 aa21.25■□□□□ 0.99
PPFIA3-209ENST00000602783 PCDHGC4Q9Y5F7 938 aa21.25■□□□□ 0.99
PPFIA3-209ENST00000602783 UNC13CQ8NB66 2214 aa21.25■□□□□ 0.99
PPFIA3-209ENST00000602783 ERVH48-1M5A8F1 160 aa21.24■□□□□ 0.99
PPFIA3-209ENST00000602783 CBFA2T2O43439 604 aa21.24■□□□□ 0.99
PPFIA3-209ENST00000602783 HOXC4P09017 264 aaPredicted RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms