RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 TMPRSS15P98073 1019 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 PTPRCAPQ14761 206 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 LRRC14Q15048 493 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 SEPT7Q16181 437 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 PTPRNQ16849 979 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 PTAR1Q7Z6K3 402 aaPredicted RBP17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 NDUFAF2Q8N183 169 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 KDM1BQ8NB78 822 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 SMRP1Q8NCR6 262 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 OR4K2Q8NGD2 314 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 GPR150Q8NGU9 434 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 TCP10LQ8TDR4 215 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 FGF14Q92915 247 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 ECHDC3Q96DC8 303 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 SMIM14Q96QK8 99 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 HEPHQ9BQS7 1158 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 TRMT61BQ9BVS5 477 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 ZDHHC6Q9H6R6 413 aa17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 MTO1Q9Y2Z2 717 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-224ENST00000600718 RANBP2P49792 3224 aaKnown RBP17.69■□□□□ 0.42
SHKBP1-224ENST00000600718 A0A0J9YYE9 177 aa17.69■□□□□ 0.42
SHKBP1-224ENST00000600718 CCDC162PA2VCL2 907 aa17.69■□□□□ 0.42
SHKBP1-224ENST00000600718 TTC34A8MYJ7 566 aa17.69■□□□□ 0.42
SHKBP1-224ENST00000600718 TPP1O14773 563 aa17.69■□□□□ 0.42
SHKBP1-224ENST00000600718 GOT2P00505 430 aaKnown RBP17.69■□□□□ 0.42
SHKBP1-224ENST00000600718 TRBC1P01850 177 aa17.69■□□□□ 0.42
SHKBP1-224ENST00000600718 CTPS1P17812 591 aa17.69■□□□□ 0.42
SHKBP1-224ENST00000600718 TYK2P29597 1187 aa17.69■□□□□ 0.42
SHKBP1-224ENST00000600718 CCT5P48643 541 aa17.69■□□□□ 0.42
SHKBP1-224ENST00000600718 SERPINB8P50452 374 aa17.69■□□□□ 0.42
SHKBP1-224ENST00000600718 NEK3P51956 506 aa17.69■□□□□ 0.42
SHKBP1-224ENST00000600718 CORO7P57737 925 aa17.69■□□□□ 0.42
SHKBP1-224ENST00000600718 IL9RQ01113 521 aa17.69■□□□□ 0.42
SHKBP1-224ENST00000600718 OR4L1Q8NH43 312 aa17.69■□□□□ 0.42
SHKBP1-224ENST00000600718 GPR22Q99680 433 aa17.69■□□□□ 0.42
SHKBP1-224ENST00000600718 C19orf43Q9BQ61 176 aa17.69■□□□□ 0.42
SHKBP1-224ENST00000600718 EPS15L1Q9UBC2 864 aa17.69■□□□□ 0.42
SHKBP1-224ENST00000600718 PPIL1Q9Y3C6 166 aa17.69■□□□□ 0.42
SHKBP1-224ENST00000600718 ZNF711Q9Y462 761 aa17.69■□□□□ 0.42
SHKBP1-224ENST00000600718 KIF26AQ9ULI4 1882 aaPredicted RBP17.69■□□□□ 0.42
SHKBP1-224ENST00000600718 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 PRRT4C9JH25 899 aa17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 CCL22O00626 93 aa17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 STX7O15400 261 aaKnown RBP17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 ASMTLO95671 621 aa17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 GDI1P31150 447 aa17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 GJA4P35212 333 aa17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 EIF2DP41214 584 aaKnown RBP17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 MAGEA12P43365 314 aa17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 LEPRP48357 1165 aaKnown RBP17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 CD151P48509 253 aa17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 WDR4P57081 412 aaKnown RBP17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 MPP1Q00013 466 aa17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 PREPLQ4J6C6 727 aaPredicted RBP17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 HHATQ5VTY9 493 aa17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 MRNIPQ6NTE8 343 aa17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 GDPD4Q6W3E5 623 aa17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 CILP2Q8IUL8 1156 aa17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 OTUD6BQ8N6M0 293 aa17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 CHST14Q8NCH0 376 aa17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 CKAP2Q8WWK9 683 aa17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 CABS1Q96KC9 395 aa17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 GPR63Q9BZJ6 419 aa17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 IQCGQ9H095 443 aaKnown RBP17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 EPN3Q9H201 632 aa17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 SUDS3Q9H7L9 328 aaPredicted RBP17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 MLXIPLQ9NP71 852 aa17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 GTSE1Q9NYZ3 720 aa17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 CD207Q9UJ71 328 aa17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 CD3EAPO15446 510 aaKnown RBP17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 MPOP05164 745 aa17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 CRHR1P34998 444 aa17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 OPRD1P41143 372 aa17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 KDSRQ06136 332 aa17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 TTC31Q49AM3 519 aaPredicted RBP17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 AFTPHQ6ULP2 937 aa17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 TAX1BP1Q86VP1 789 aa17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 PHTF2Q8N3S3 785 aa17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 SCG3Q8WXD2 468 aaKnown RBP17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 PPM1EQ8WY54 764 aa17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 SUSD6Q92537 303 aa17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 NXPE3Q969Y0 559 aa17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 ATXN7L3BQ96GX2 97 aa17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 LRIG1Q96JA1 1093 aa17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 SLC13A1Q9BZW2 595 aa17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 SNX15Q9NRS6 342 aa17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 PCMTD2Q9NV79 361 aa17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 PKP3Q9Y446 797 aa17.68■□□□□ 0.42
SHKBP1-224ENST00000600718 GMNCA6NCL1 334 aa17.67■□□□□ 0.42
SHKBP1-224ENST00000600718 CAPN8A6NHC0 703 aa17.67■□□□□ 0.42
SHKBP1-224ENST00000600718 HAUS5O94927 633 aa17.67■□□□□ 0.42
SHKBP1-224ENST00000600718 ALPIP09923 528 aa17.67■□□□□ 0.42
SHKBP1-224ENST00000600718 HNF1BP35680 557 aa17.67■□□□□ 0.42
SHKBP1-224ENST00000600718 HMGCLP35914 325 aa17.67■□□□□ 0.42
SHKBP1-224ENST00000600718 POLR2LP62875 67 aaKnown RBP17.67■□□□□ 0.42
SHKBP1-224ENST00000600718 MESP2Q0VG99 397 aa17.67■□□□□ 0.42
SHKBP1-224ENST00000600718 PTPRRQ15256 657 aa17.67■□□□□ 0.42
SHKBP1-224ENST00000600718 ITPRIPL2Q3MIP1 535 aa17.67■□□□□ 0.42
SHKBP1-224ENST00000600718 SDCCAG8Q86SQ7 713 aaPredicted RBP17.67■□□□□ 0.42
SHKBP1-224ENST00000600718 TERB1Q8NA31 727 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms