RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 THRAP10827 490 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 HOXD10P28358 340 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 CORO1AP31146 461 aaKnown RBP11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 SGSHP51688 502 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 KPNA2P52292 529 aaKnown RBP11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 PLIN5Q00G26 463 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 CILP2Q8IUL8 1156 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 UMODL1-AS1Q8N2C9 162 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 BBS5Q8N3I7 341 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 FUBP3Q96I24 572 aaKnown RBP eCLIP11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 KCNA7Q96RP8 456 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 ZNF184Q99676 751 aaPredicted RBP11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 SEMA4BQ9NPR2 832 aaPredicted RBP11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 TREX1Q9NSU2 369 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 COPG1Q9Y678 874 aaKnown RBP11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 NDUFS3O75489 264 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 SRP72O76094 671 aaKnown RBP11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 RTN3O95197 1032 aaPredicted RBP11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 ATF6P18850 670 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 XRCC1P18887 633 aaPredicted RBP11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 MAGEA12P43365 314 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 RAP1GDS1P52306 607 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 THOP1P52888 689 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 ECT2LQ008S8 904 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 POU4F1Q01851 419 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 LAMB3Q13751 1172 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 RPS6KA2Q15349 733 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 LRRC23Q53EV4 343 aaPredicted RBP11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 TRPC4APQ8TEL6 797 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 NSUN5Q96P11 429 aaKnown RBP11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 TRIM8Q9BZR9 551 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 TMEM248Q9NWD8 314 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 CDH23Q9H251 3354 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 PEX11BO96011 259 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 GALTP07902 379 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 MMP2P08253 660 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 PPARGP37231 505 aaPredicted RBP11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 SLC11A2P49281 568 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 NDST2P52849 883 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 GNA12Q03113 381 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 ZNF177Q13360 481 aaPredicted RBP11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 SERINC3Q13530 473 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 TMCO4Q5TGY1 634 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 MYLK4Q86YV6 388 aaPredicted RBP11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 ARL10Q8N8L6 244 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 GDPD5Q8WTR4 605 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 SEPT8Q92599 483 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 WDR41Q9HAD4 459 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 MID1IP1Q9NPA3 183 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 MARCH5Q9NX47 278 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 RHBDL2Q9NX52 303 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 CLIC5Q9NZA1 410 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 UBA2Q9UBT2 640 aaPredicted RBP11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 TRIM17Q9Y577 477 aa11.56□□□□□ -0.56
ARHGEF1-220ENST00000600274 TDRD15B5MCY1 1934 aaKnown RBP11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 C2orf78A6NCI8 922 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 IQCF5A8MTL0 148 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 H0Y626 953 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 IPO13O94829 963 aaKnown RBP11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 ALDH1A1P00352 501 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 CHRM3P20309 590 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 GSTT1P30711 240 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 C1QTNF8P60827 252 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 NOGQ13253 232 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 CCNIQ14094 377 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 SEMA3AQ14563 771 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 TCTN1Q2MV58 587 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 RNF219Q5W0B1 726 aaPredicted RBP11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 TMEM207Q6UWW9 146 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 BNC2Q6ZN30 1099 aaPredicted RBP11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 DPF3Q92784 378 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 WBP2Q969T9 261 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 GCNAQ96QF7 691 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 SIKE1Q9BRV8 207 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 COPS7BQ9H9Q2 264 aaPredicted RBP11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 SCUBE2Q9NQ36 999 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 CREBZFQ9NS37 354 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 CATSPERZQ9NTU4 200 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 ETAA1Q9NY74 926 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 FAM8A1Q9UBU6 413 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 DNMT3LQ9UJW3 386 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 LRRC42Q9Y546 428 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 TIMM22Q9Y584 194 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 SPO11Q9Y5K1 396 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 C5orf42Q9H799 3197 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 UNC80Q8N2C7 3258 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 RGSL1A5PLK6 1076 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 ARVCFO00192 962 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 SYN3O14994 580 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 PFDN1O60925 122 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 MBL2P11226 248 aaPredicted RBP11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 FGFR3P22607 806 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 GKP32189 559 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 DSG1Q02413 1049 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 DEFB115Q30KQ5 88 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 ATXN7L2Q5T6C5 722 aaPredicted RBP11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 MRNIPQ6NTE8 343 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 MSANTD2Q6P1R3 559 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms