RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 CAPN6Q9Y6Q1 641 aa28.27■■■□□ 2.12
SSBP4-206ENST00000599699 NPIPB15A6NHN6 443 aaPredicted RBP28.26■■■□□ 2.11
SSBP4-206ENST00000599699 APOC4-APOC2K7ER74 178 aa28.26■■■□□ 2.11
SSBP4-206ENST00000599699 TOR1BO14657 336 aa28.26■■■□□ 2.11
SSBP4-206ENST00000599699 FZD6O60353 706 aa28.26■■■□□ 2.11
SSBP4-206ENST00000599699 HEXIM1O94992 359 aaKnown RBP28.26■■■□□ 2.11
SSBP4-206ENST00000599699 APOC2P02655 101 aa28.26■■■□□ 2.11
SSBP4-206ENST00000599699 PYGMP11217 842 aa28.26■■■□□ 2.11
SSBP4-206ENST00000599699 SKOR1P84550 965 aa28.26■■■□□ 2.11
SSBP4-206ENST00000599699 INPP5AQ14642 412 aa28.26■■■□□ 2.11
SSBP4-206ENST00000599699 PTPRRQ15256 657 aa28.26■■■□□ 2.11
SSBP4-206ENST00000599699 CNGA3Q16281 694 aa28.26■■■□□ 2.11
SSBP4-206ENST00000599699 TEX44Q53QW1 395 aa28.26■■■□□ 2.11
SSBP4-206ENST00000599699 LPCAT1Q8NF37 534 aa28.26■■■□□ 2.11
SSBP4-206ENST00000599699 IFT43Q96FT9 208 aa28.26■■■□□ 2.11
SSBP4-206ENST00000599699 MCCC1Q96RQ3 725 aaPredicted RBP28.26■■■□□ 2.11
SSBP4-206ENST00000599699 RBM15Q96T37 977 aaKnown RBP eCLIP28.26■■■□□ 2.11
SSBP4-206ENST00000599699 FTSJ1Q9UET6 329 aa28.26■■■□□ 2.11
SSBP4-206ENST00000599699 EFR3BQ9Y2G0 817 aa28.26■■■□□ 2.11
SSBP4-206ENST00000599699 PCNX2A6NKB5 2137 aa28.25■■■□□ 2.11
SSBP4-206ENST00000599699 H7C0C1 242 aa28.25■■■□□ 2.11
SSBP4-206ENST00000599699 MTSS1O43312 755 aa28.25■■■□□ 2.11
SSBP4-206ENST00000599699 MMP2P08253 660 aa28.25■■■□□ 2.11
SSBP4-206ENST00000599699 CCDC175P0C221 793 aa28.25■■■□□ 2.11
SSBP4-206ENST00000599699 PTPN3P26045 913 aa28.25■■■□□ 2.11
SSBP4-206ENST00000599699 PTPN7P35236 360 aa28.25■■■□□ 2.11
SSBP4-206ENST00000599699 HNF1BP35680 557 aa28.25■■■□□ 2.11
SSBP4-206ENST00000599699 ATP5OP48047 213 aa28.25■■■□□ 2.11
SSBP4-206ENST00000599699 TPRG1LQ5T0D9 272 aa28.25■■■□□ 2.11
SSBP4-206ENST00000599699 AADACL2Q6P093 401 aa28.25■■■□□ 2.11
SSBP4-206ENST00000599699 TSPAN33Q86UF1 283 aa28.25■■■□□ 2.11
SSBP4-206ENST00000599699 QKIQ96PU8 341 aaKnown RBP eCLIP28.25■■■□□ 2.11
SSBP4-206ENST00000599699 SLC25A51Q9H1U9 297 aa28.25■■■□□ 2.11
SSBP4-206ENST00000599699 PPIL1Q9Y3C6 166 aa28.25■■■□□ 2.11
SSBP4-206ENST00000599699 A0A0J9YYE9 177 aa28.24■■■□□ 2.11
SSBP4-206ENST00000599699 HACD1B0YJ81 288 aa28.24■■■□□ 2.11
SSBP4-206ENST00000599699 TJP3O95049 919 aa28.24■■■□□ 2.11
SSBP4-206ENST00000599699 TRBC1P01850 177 aa28.24■■■□□ 2.11
SSBP4-206ENST00000599699 LHCGRP22888 699 aa28.24■■■□□ 2.11
SSBP4-206ENST00000599699 HNRNPKP61978 463 aaKnown RBP eCLIP28.24■■■□□ 2.111e-17■■■■■ 94.9
SSBP4-206ENST00000599699 FOXC1Q12948 553 aa28.24■■■□□ 2.11
SSBP4-206ENST00000599699 ZNF211Q13398 564 aaPredicted RBP28.24■■■□□ 2.11
SSBP4-206ENST00000599699 BAHD1Q8TBE0 780 aaPredicted RBP28.24■■■□□ 2.11
SSBP4-206ENST00000599699 NUS1Q96E22 293 aa28.24■■■□□ 2.11
SSBP4-206ENST00000599699 IMP4Q96G21 291 aaKnown RBP28.24■■■□□ 2.11
SSBP4-206ENST00000599699 COQ10AQ96MF6 247 aa28.24■■■□□ 2.11
SSBP4-206ENST00000599699 SMIM14Q96QK8 99 aa28.24■■■□□ 2.11
SSBP4-206ENST00000599699 HERPUD2Q9BSE4 406 aa28.24■■■□□ 2.11
SSBP4-206ENST00000599699 GLOD4Q9HC38 313 aa28.24■■■□□ 2.11
SSBP4-206ENST00000599699 OR1A2Q9Y585 309 aa28.24■■■□□ 2.11
SSBP4-206ENST00000599699 H3BM21 787 aa28.23■■■□□ 2.11
SSBP4-206ENST00000599699 CSF2P04141 144 aa28.23■■■□□ 2.11
SSBP4-206ENST00000599699 DGKAP23743 735 aa28.23■■■□□ 2.11
SSBP4-206ENST00000599699 RPL26P61254 145 aaKnown RBP28.23■■■□□ 2.11
SSBP4-206ENST00000599699 MTM1Q13496 603 aa28.23■■■□□ 2.11
SSBP4-206ENST00000599699 KDELC2Q7Z4H8 507 aa28.23■■■□□ 2.11
SSBP4-206ENST00000599699 HSD11B1LQ7Z5J1 315 aa28.23■■■□□ 2.11
SSBP4-206ENST00000599699 PLA2G15Q8NCC3 412 aa28.23■■■□□ 2.11
SSBP4-206ENST00000599699 HTR3CQ8WXA8 447 aa28.23■■■□□ 2.11
SSBP4-206ENST00000599699 TEKT5Q96M29 485 aa28.23■■■□□ 2.11
SSBP4-206ENST00000599699 APOOQ9BUR5 198 aa28.23■■■□□ 2.11
SSBP4-206ENST00000599699 ADGRE3Q9BY15 652 aa28.23■■■□□ 2.11
SSBP4-206ENST00000599699 CAAP1Q9H8G2 361 aa28.23■■■□□ 2.11
SSBP4-206ENST00000599699 UCKL1Q9NWZ5 548 aa28.23■■■□□ 2.11
SSBP4-206ENST00000599699 KLHL8Q9P2G9 620 aaPredicted RBP28.23■■■□□ 2.11
SSBP4-206ENST00000599699 RPL26L1Q9UNX3 145 aaKnown RBP28.23■■■□□ 2.11
SSBP4-206ENST00000599699 A0A0U1RQS6 177 aa28.22■■■□□ 2.11
SSBP4-206ENST00000599699 PIAS2O75928 621 aa28.22■■■□□ 2.11
SSBP4-206ENST00000599699 PRLP01236 227 aa28.22■■■□□ 2.11
SSBP4-206ENST00000599699 FTH1P19P0C7X4 201 aa28.22■■■□□ 2.11
SSBP4-206ENST00000599699 NME1P15531 152 aaKnown RBP28.22■■■□□ 2.11
SSBP4-206ENST00000599699 JUNDP17535 347 aa28.22■■■□□ 2.11
SSBP4-206ENST00000599699 GM2AP17900 193 aa28.22■■■□□ 2.11
SSBP4-206ENST00000599699 HTR1BP28222 390 aa28.22■■■□□ 2.11
SSBP4-206ENST00000599699 ETV3P41162 512 aa28.22■■■□□ 2.11
SSBP4-206ENST00000599699 OTUD4Q01804 1114 aaKnown RBP28.22■■■□□ 2.11
SSBP4-206ENST00000599699 WASHC5Q12768 1159 aa28.22■■■□□ 2.11
SSBP4-206ENST00000599699 XRCC4Q13426 336 aa28.22■■■□□ 2.11
SSBP4-206ENST00000599699 NOMO1Q15155 1222 aa28.22■■■□□ 2.11
SSBP4-206ENST00000599699 PCSK7Q16549 785 aa28.22■■■□□ 2.11
SSBP4-206ENST00000599699 HS1BP3Q53T59 392 aa28.22■■■□□ 2.11
SSBP4-206ENST00000599699 LRRC66Q68CR7 880 aa28.22■■■□□ 2.11
SSBP4-206ENST00000599699 CRTC1Q6UUV9 634 aa28.22■■■□□ 2.11
SSBP4-206ENST00000599699 MACC1Q6ZN28 852 aa28.22■■■□□ 2.11
SSBP4-206ENST00000599699 KANSL1Q7Z3B3 1105 aa28.22■■■□□ 2.11
SSBP4-206ENST00000599699 GLRX5Q86SX6 157 aa28.22■■■□□ 2.11
SSBP4-206ENST00000599699 ACTL9Q8TC94 416 aa28.22■■■□□ 2.11
SSBP4-206ENST00000599699 FERMT1Q9BQL6 677 aa28.22■■■□□ 2.11
SSBP4-206ENST00000599699 LZTFL1Q9NQ48 299 aa28.22■■■□□ 2.11
SSBP4-206ENST00000599699 DNPEPQ9ULA0 475 aa28.22■■■□□ 2.11
SSBP4-206ENST00000599699 APOBEC2Q9Y235 224 aaKnown RBP28.22■■■□□ 2.11
SSBP4-206ENST00000599699 CAPN8A6NHC0 703 aa28.21■■■□□ 2.11
SSBP4-206ENST00000599699 PSMD11O00231 422 aa28.21■■■□□ 2.11
SSBP4-206ENST00000599699 DDX3YO15523 660 aaKnown RBP28.21■■■□□ 2.11
SSBP4-206ENST00000599699 FFAR2O15552 330 aa28.21■■■□□ 2.11
SSBP4-206ENST00000599699 TNFSF14O43557 240 aa28.21■■■□□ 2.11
SSBP4-206ENST00000599699 LDOC1O95751 146 aaPredicted RBP28.21■■■□□ 2.11
SSBP4-206ENST00000599699 CCZ1BP86790 482 aa28.21■■■□□ 2.11
SSBP4-206ENST00000599699 CCZ1P86791 482 aaPredicted RBP28.21■■■□□ 2.11
SSBP4-206ENST00000599699 EIF2B5Q13144 721 aaKnown RBP28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms