RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 CAPN6Q9Y6Q1 641 aa16.78■□□□□ 0.28
SSBP4-204ENST00000597724 A0A0J9YYE9 177 aa16.77■□□□□ 0.28
SSBP4-204ENST00000597724 GOLGA6L3A6NEY3 463 aa16.77■□□□□ 0.28
SSBP4-204ENST00000597724 NPIPB15A6NHN6 443 aaPredicted RBP16.77■□□□□ 0.28
SSBP4-204ENST00000597724 KRT86O43790 486 aa16.77■□□□□ 0.28
SSBP4-204ENST00000597724 HEXIM1O94992 359 aaKnown RBP16.77■□□□□ 0.28
SSBP4-204ENST00000597724 FTCDO95954 541 aa16.77■□□□□ 0.28
SSBP4-204ENST00000597724 TRBC1P01850 177 aa16.77■□□□□ 0.28
SSBP4-204ENST00000597724 ALPIP09923 528 aa16.77■□□□□ 0.28
SSBP4-204ENST00000597724 CTPS1P17812 591 aa16.77■□□□□ 0.28
SSBP4-204ENST00000597724 CA4P22748 312 aa16.77■□□□□ 0.28
SSBP4-204ENST00000597724 PTPN3P26045 913 aa16.77■□□□□ 0.28
SSBP4-204ENST00000597724 HNF1BP35680 557 aa16.77■□□□□ 0.28
SSBP4-204ENST00000597724 CETN2P41208 172 aa16.77■□□□□ 0.28
SSBP4-204ENST00000597724 THOP1P52888 689 aa16.77■□□□□ 0.28
SSBP4-204ENST00000597724 RPL26P61254 145 aaKnown RBP16.77■□□□□ 0.28
SSBP4-204ENST00000597724 WASHC5Q12768 1159 aa16.77■□□□□ 0.28
SSBP4-204ENST00000597724 PTK2BQ14289 1009 aa16.77■□□□□ 0.28
SSBP4-204ENST00000597724 INPP5AQ14642 412 aa16.77■□□□□ 0.28
SSBP4-204ENST00000597724 ACOX1Q15067 660 aa16.77■□□□□ 0.28
SSBP4-204ENST00000597724 ZNF542PQ5EBM4 170 aa16.77■□□□□ 0.28
SSBP4-204ENST00000597724 AADACL2Q6P093 401 aa16.77■□□□□ 0.28
SSBP4-204ENST00000597724 PARGQ86W56 976 aa16.77■□□□□ 0.28
SSBP4-204ENST00000597724 SLC25A45Q8N413 288 aa16.77■□□□□ 0.28
SSBP4-204ENST00000597724 UBL4BQ8N7F7 174 aa16.77■□□□□ 0.28
SSBP4-204ENST00000597724 IMP4Q96G21 291 aaKnown RBP16.77■□□□□ 0.28
SSBP4-204ENST00000597724 TEKT5Q96M29 485 aa16.77■□□□□ 0.28
SSBP4-204ENST00000597724 SLC25A51Q9H1U9 297 aa16.77■□□□□ 0.28
SSBP4-204ENST00000597724 CAAP1Q9H8G2 361 aa16.77■□□□□ 0.28
SSBP4-204ENST00000597724 GLOD4Q9HC38 313 aa16.77■□□□□ 0.28
SSBP4-204ENST00000597724 PCDH9Q9HC56 1237 aa16.77■□□□□ 0.28
SSBP4-204ENST00000597724 DNAJC28Q9NX36 388 aa16.77■□□□□ 0.28
SSBP4-204ENST00000597724 GUCA1BQ9UMX6 200 aa16.77■□□□□ 0.28
SSBP4-204ENST00000597724 PACSIN2Q9UNF0 486 aaPredicted RBP16.77■□□□□ 0.28
SSBP4-204ENST00000597724 RPL26L1Q9UNX3 145 aaKnown RBP16.77■□□□□ 0.28
SSBP4-204ENST00000597724 ARID1BQ8NFD5 2236 aaPredicted RBP16.77■□□□□ 0.27
SSBP4-204ENST00000597724 TDRD6O60522 2096 aaKnown RBP16.76■□□□□ 0.27
SSBP4-204ENST00000597724 HACD1B0YJ81 288 aa16.76■□□□□ 0.27
SSBP4-204ENST00000597724 DDX3YO15523 660 aaKnown RBP16.76■□□□□ 0.27
SSBP4-204ENST00000597724 MTSS1O43312 755 aa16.76■□□□□ 0.27
SSBP4-204ENST00000597724 SDC3O75056 442 aa16.76■□□□□ 0.27
SSBP4-204ENST00000597724 CSF2P04141 144 aa16.76■□□□□ 0.27
SSBP4-204ENST00000597724 LHCGRP22888 699 aa16.76■□□□□ 0.27
SSBP4-204ENST00000597724 DGKAP23743 735 aa16.76■□□□□ 0.27
SSBP4-204ENST00000597724 PMLP29590 882 aa16.76■□□□□ 0.27
SSBP4-204ENST00000597724 EPHB1P54762 984 aa16.76■□□□□ 0.27
SSBP4-204ENST00000597724 HNRNPKP61978 463 aaKnown RBP eCLIP16.76■□□□□ 0.27
SSBP4-204ENST00000597724 CCZ1BP86790 482 aa16.76■□□□□ 0.27
SSBP4-204ENST00000597724 CCZ1P86791 482 aaPredicted RBP16.76■□□□□ 0.27
SSBP4-204ENST00000597724 EIF2B5Q13144 721 aaKnown RBP16.76■□□□□ 0.27
SSBP4-204ENST00000597724 XRCC4Q13426 336 aa16.76■□□□□ 0.27
SSBP4-204ENST00000597724 MTM1Q13496 603 aa16.76■□□□□ 0.27
SSBP4-204ENST00000597724 NOMO1Q15155 1222 aa16.76■□□□□ 0.27
SSBP4-204ENST00000597724 CCDC181Q5TID7 509 aa16.76■□□□□ 0.27
SSBP4-204ENST00000597724 CRTC1Q6UUV9 634 aa16.76■□□□□ 0.27
SSBP4-204ENST00000597724 TSPAN33Q86UF1 283 aa16.76■□□□□ 0.27
SSBP4-204ENST00000597724 EID2Q8N6I1 236 aa16.76■□□□□ 0.27
SSBP4-204ENST00000597724 PLA2G15Q8NCC3 412 aa16.76■□□□□ 0.27
SSBP4-204ENST00000597724 TADA1Q96BN2 335 aa16.76■□□□□ 0.27
SSBP4-204ENST00000597724 HES6Q96HZ4 224 aa16.76■□□□□ 0.27
SSBP4-204ENST00000597724 QKIQ96PU8 341 aaKnown RBP eCLIP16.76■□□□□ 0.27
SSBP4-204ENST00000597724 SMIM14Q96QK8 99 aa16.76■□□□□ 0.27
SSBP4-204ENST00000597724 RBM15Q96T37 977 aaKnown RBP eCLIP16.76■□□□□ 0.27
SSBP4-204ENST00000597724 APOOQ9BUR5 198 aa16.76■□□□□ 0.27
SSBP4-204ENST00000597724 KCTD5Q9NXV2 234 aa16.76■□□□□ 0.27
SSBP4-204ENST00000597724 CEP295Q9C0D2 2601 aa16.76■□□□□ 0.27
SSBP4-204ENST00000597724 SPEGQ15772 3267 aa16.76■□□□□ 0.27
SSBP4-204ENST00000597724 GOLGA8CPA6NN73 597 aa16.75■□□□□ 0.27
SSBP4-204ENST00000597724 PSMD11O00231 422 aa16.75■□□□□ 0.27
SSBP4-204ENST00000597724 PIAS2O75928 621 aa16.75■□□□□ 0.27
SSBP4-204ENST00000597724 CCDC175P0C221 793 aa16.75■□□□□ 0.27
SSBP4-204ENST00000597724 NME1P15531 152 aaKnown RBP16.75■□□□□ 0.27
SSBP4-204ENST00000597724 OTUD4Q01804 1114 aaKnown RBP16.75■□□□□ 0.27
SSBP4-204ENST00000597724 ARHGEF7Q14155 803 aa16.75■□□□□ 0.27
SSBP4-204ENST00000597724 SLC14A2Q15849 920 aa16.75■□□□□ 0.27
SSBP4-204ENST00000597724 MACC1Q6ZN28 852 aa16.75■□□□□ 0.27
SSBP4-204ENST00000597724 ZNF662Q6ZS27 426 aa16.75■□□□□ 0.27
SSBP4-204ENST00000597724 ACTL9Q8TC94 416 aa16.75■□□□□ 0.27
SSBP4-204ENST00000597724 UBE2Q2Q8WVN8 375 aa16.75■□□□□ 0.27
SSBP4-204ENST00000597724 HTR3CQ8WXA8 447 aa16.75■□□□□ 0.27
SSBP4-204ENST00000597724 UCKL1Q9NWZ5 548 aa16.75■□□□□ 0.27
SSBP4-204ENST00000597724 KLF15Q9UIH9 416 aa16.75■□□□□ 0.27
SSBP4-204ENST00000597724 PNMA8BQ9ULN7 279 aaPredicted RBP16.75■□□□□ 0.27
SSBP4-204ENST00000597724 COL5A1P20908 1838 aaPredicted RBP16.75■□□□□ 0.27
SSBP4-204ENST00000597724 A0A0U1RQS6 177 aa16.74■□□□□ 0.27
SSBP4-204ENST00000597724 CAPN8A6NHC0 703 aa16.74■□□□□ 0.27
SSBP4-204ENST00000597724 ANKRD66B4E2M5 251 aa16.74■□□□□ 0.27
SSBP4-204ENST00000597724 TNFSF14O43557 240 aa16.74■□□□□ 0.27
SSBP4-204ENST00000597724 TJP3O95049 919 aa16.74■□□□□ 0.27
SSBP4-204ENST00000597724 PCCBP05166 539 aa16.74■□□□□ 0.27
SSBP4-204ENST00000597724 FTH1P19P0C7X4 201 aa16.74■□□□□ 0.27
SSBP4-204ENST00000597724 ZNF30P17039 623 aa16.74■□□□□ 0.27
SSBP4-204ENST00000597724 CD68P34810 354 aaPredicted RBP16.74■□□□□ 0.27
SSBP4-204ENST00000597724 TRIM23P36406 574 aa16.74■□□□□ 0.27
SSBP4-204ENST00000597724 ETV3P41162 512 aa16.74■□□□□ 0.27
SSBP4-204ENST00000597724 PTSQ03393 145 aa16.74■□□□□ 0.27
SSBP4-204ENST00000597724 ZNF211Q13398 564 aaPredicted RBP16.74■□□□□ 0.27
SSBP4-204ENST00000597724 LRRC66Q68CR7 880 aa16.74■□□□□ 0.27
SSBP4-204ENST00000597724 DENND2CQ68D51 928 aa16.74■□□□□ 0.27
SSBP4-204ENST00000597724 ESRP1Q6NXG1 681 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms