RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 FZD10Q9ULW2 581 aa10.01□□□□□ -0.81
LIG1-209ENST00000596104 PCDHB11Q9Y5F2 797 aa10.01□□□□□ -0.81
LIG1-209ENST00000596104 PRSS38A1L453 326 aa10□□□□□ -0.81
LIG1-209ENST00000596104 SIGLEC16A6NMB1 481 aa10□□□□□ -0.81
LIG1-209ENST00000596104 FGF10O15520 208 aaPredicted RBP10□□□□□ -0.81
LIG1-209ENST00000596104 CREB3O43889 395 aa10□□□□□ -0.81
LIG1-209ENST00000596104 PPFIA2O75334 1257 aa10□□□□□ -0.81
LIG1-209ENST00000596104 CPNE6O95741 557 aa10□□□□□ -0.81
LIG1-209ENST00000596104 FUCA1P04066 466 aa10□□□□□ -0.81
LIG1-209ENST00000596104 STAT1P42224 750 aa10□□□□□ -0.81
LIG1-209ENST00000596104 KLK7P49862 253 aa10□□□□□ -0.81
LIG1-209ENST00000596104 ZNF143P52747 638 aaPredicted RBP10□□□□□ -0.81
LIG1-209ENST00000596104 NDST2P52849 883 aa10□□□□□ -0.81
LIG1-209ENST00000596104 MAZP56270 477 aaKnown RBP10□□□□□ -0.81
LIG1-209ENST00000596104 POLR2FP61218 127 aaKnown RBP10□□□□□ -0.81
LIG1-209ENST00000596104 UBE2HP62256 183 aa10□□□□□ -0.81
LIG1-209ENST00000596104 CLPPQ16740 277 aaPredicted RBP10□□□□□ -0.81
LIG1-209ENST00000596104 CLEC16AQ2KHT3 1053 aa10□□□□□ -0.81
LIG1-209ENST00000596104 TCP11X2Q5H9J9 407 aa10□□□□□ -0.81
LIG1-209ENST00000596104 SCYL2Q6P3W7 929 aa10□□□□□ -0.81
LIG1-209ENST00000596104 DPPA4Q7L190 304 aa10□□□□□ -0.81
LIG1-209ENST00000596104 MON1BQ7L1V2 547 aa10□□□□□ -0.81
LIG1-209ENST00000596104 SRLQ86TD4 932 aa10□□□□□ -0.81
LIG1-209ENST00000596104 PIM3Q86V86 326 aa10□□□□□ -0.81
LIG1-209ENST00000596104 NRROSQ86YC3 692 aa10□□□□□ -0.81
LIG1-209ENST00000596104 PHF13Q86YI8 300 aaPredicted RBP10□□□□□ -0.81
LIG1-209ENST00000596104 KIAA1524Q8TCG1 905 aa10□□□□□ -0.81
LIG1-209ENST00000596104 GPBAR1Q8TDU6 330 aa10□□□□□ -0.81
LIG1-209ENST00000596104 JPH3Q8WXH2 748 aaPredicted RBP10□□□□□ -0.81
LIG1-209ENST00000596104 NKD1Q969G9 470 aa10□□□□□ -0.81
LIG1-209ENST00000596104 PMEPA1Q969W9 287 aa10□□□□□ -0.81
LIG1-209ENST00000596104 NSMCE3Q96MG7 304 aa10□□□□□ -0.81
LIG1-209ENST00000596104 NUDT22Q9BRQ3 303 aa10□□□□□ -0.81
LIG1-209ENST00000596104 SELENOOQ9BVL4 669 aa10□□□□□ -0.81
LIG1-209ENST00000596104 WDR26Q9H7D7 661 aa10□□□□□ -0.81
LIG1-209ENST00000596104 ATP13A3Q9H7F0 1226 aa10□□□□□ -0.81
LIG1-209ENST00000596104 CYP4F12Q9HCS2 524 aa10□□□□□ -0.81
LIG1-209ENST00000596104 SPATS2LQ9NUQ6 558 aaKnown RBP10□□□□□ -0.81
LIG1-209ENST00000596104 TAB2Q9NYJ8 693 aa10□□□□□ -0.81
LIG1-209ENST00000596104 PCDHGA3Q9Y5H0 932 aa10□□□□□ -0.81
LIG1-209ENST00000596104 IGHV5-10-1A0A0J9YXX1 117 aa9.99□□□□□ -0.81
LIG1-209ENST00000596104 STMND1H3BQB6 276 aa9.99□□□□□ -0.81
LIG1-209ENST00000596104 TRAFD1O14545 582 aaPredicted RBP9.99□□□□□ -0.81
LIG1-209ENST00000596104 HGSO14964 777 aaPredicted RBP9.99□□□□□ -0.81
LIG1-209ENST00000596104 FGF1P05230 155 aa9.99□□□□□ -0.81
LIG1-209ENST00000596104 CALB1P05937 261 aa9.99□□□□□ -0.81
LIG1-209ENST00000596104 ELFN1P0C7U0 828 aa9.99□□□□□ -0.81
LIG1-209ENST00000596104 FGF3P11487 239 aaPredicted RBP9.99□□□□□ -0.81
LIG1-209ENST00000596104 CCNB1P14635 433 aa9.99□□□□□ -0.81
LIG1-209ENST00000596104 EEF1GP26641 437 aaKnown RBP9.99□□□□□ -0.81
LIG1-209ENST00000596104 CD1CP29017 333 aa9.99□□□□□ -0.81
LIG1-209ENST00000596104 SERPINA4P29622 427 aa9.99□□□□□ -0.81
LIG1-209ENST00000596104 HTR7P34969 479 aa9.99□□□□□ -0.81
LIG1-209ENST00000596104 NSFP46459 744 aaKnown RBP9.99□□□□□ -0.81
LIG1-209ENST00000596104 PAPOLAP51003 745 aaKnown RBP9.99□□□□□ -0.81
LIG1-209ENST00000596104 AIF1P55008 147 aa9.99□□□□□ -0.81
LIG1-209ENST00000596104 OR1D5P58170 312 aa9.99□□□□□ -0.81
LIG1-209ENST00000596104 RPL7AP62424 266 aaKnown RBP9.99□□□□□ -0.81
LIG1-209ENST00000596104 TLE1Q04724 770 aa9.99□□□□□ -0.81
LIG1-209ENST00000596104 AMZ1Q400G9 498 aa9.99□□□□□ -0.81
LIG1-209ENST00000596104 PPP1R15BQ5SWA1 713 aa9.99□□□□□ -0.81
LIG1-209ENST00000596104 TMEM164Q5U3C3 297 aa9.99□□□□□ -0.81
LIG1-209ENST00000596104 PNCKQ6P2M8 343 aa9.99□□□□□ -0.81
LIG1-209ENST00000596104 ARHGAP12Q8IWW6 846 aa9.99□□□□□ -0.81
LIG1-209ENST00000596104 RCBTB1Q8NDN9 531 aa9.99□□□□□ -0.81
LIG1-209ENST00000596104 SPOCK2Q92563 424 aa9.99□□□□□ -0.81
LIG1-209ENST00000596104 CELF6Q96J87 481 aaKnown RBP9.99□□□□□ -0.81
LIG1-209ENST00000596104 COQ10AQ96MF6 247 aa9.99□□□□□ -0.81
LIG1-209ENST00000596104 CNPY3Q9BT09 278 aa9.99□□□□□ -0.81
LIG1-209ENST00000596104 SLC39A8Q9C0K1 460 aa9.99□□□□□ -0.81
LIG1-209ENST00000596104 ADNPQ9H2P0 1102 aa9.99□□□□□ -0.81
LIG1-209ENST00000596104 NLRC4Q9NPP4 1024 aa9.99□□□□□ -0.81
LIG1-209ENST00000596104 FAM207AQ9NSI2 230 aaPredicted RBP9.99□□□□□ -0.81
LIG1-209ENST00000596104 AKAP7Q9P0M2 348 aaPredicted RBP9.99□□□□□ -0.81
LIG1-209ENST00000596104 ST14Q9Y5Y6 855 aa9.99□□□□□ -0.81
LIG1-209ENST00000596104 LRP4O75096 1905 aa9.98□□□□□ -0.81
LIG1-209ENST00000596104 SCN8AQ9UQD0 1980 aa9.98□□□□□ -0.81
LIG1-209ENST00000596104 RHPN2P1A8MT19 583 aa9.98□□□□□ -0.81
LIG1-209ENST00000596104 PDE2AO00408 941 aaPredicted RBP9.98□□□□□ -0.81
LIG1-209ENST00000596104 PALMO75781 387 aa9.98□□□□□ -0.81
LIG1-209ENST00000596104 CEACAM5P06731 702 aa9.98□□□□□ -0.81
LIG1-209ENST00000596104 MYCLP1P12525 358 aaPredicted RBP9.98□□□□□ -0.81
LIG1-209ENST00000596104 ALDH4A1P30038 563 aa9.98□□□□□ -0.81
LIG1-209ENST00000596104 LIMK2P53671 638 aa9.98□□□□□ -0.81
LIG1-209ENST00000596104 TPI1P60174 286 aa9.98□□□□□ -0.81
LIG1-209ENST00000596104 OGDHQ02218 1023 aa9.98□□□□□ -0.81
LIG1-209ENST00000596104 BCL2L1Q07817 233 aa9.98□□□□□ -0.81
LIG1-209ENST00000596104 CA9Q16790 459 aa9.98□□□□□ -0.81
LIG1-209ENST00000596104 TSR1Q2NL82 804 aaKnown RBP9.98□□□□□ -0.81
LIG1-209ENST00000596104 DNAJC24Q6P3W2 148 aa9.98□□□□□ -0.81
LIG1-209ENST00000596104 ZNF564Q8TBZ8 553 aaPredicted RBP9.98□□□□□ -0.81
LIG1-209ENST00000596104 ZDHHC1Q8WTX9 485 aa9.98□□□□□ -0.81
LIG1-209ENST00000596104 PTCD2Q8WV60 388 aaKnown RBP9.98□□□□□ -0.81
LIG1-209ENST00000596104 PATE1Q8WXA2 126 aa9.98□□□□□ -0.81
LIG1-209ENST00000596104 CCDC74BQ96LY2 380 aa9.98□□□□□ -0.81
LIG1-209ENST00000596104 MCEEQ96PE7 176 aa9.98□□□□□ -0.81
LIG1-209ENST00000596104 TAAR9Q96RI9 348 aa9.98□□□□□ -0.81
LIG1-209ENST00000596104 TEX101Q9BY14 249 aa9.98□□□□□ -0.81
LIG1-209ENST00000596104 FRMD8Q9BZ67 464 aaPredicted RBP9.98□□□□□ -0.81
LIG1-209ENST00000596104 CDH19Q9H159 772 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms