RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 ARHGEF7Q14155 803 aa14.4□□□□□ -0.1
LIG1-208ENST00000595758 GALNT3Q14435 633 aa14.4□□□□□ -0.1
LIG1-208ENST00000595758 AASDHQ4L235 1098 aaPredicted RBP14.4□□□□□ -0.1
LIG1-208ENST00000595758 DRICH1Q6PGQ1 229 aaPredicted RBP14.4□□□□□ -0.1
LIG1-208ENST00000595758 LAYNQ6UX15 382 aa14.4□□□□□ -0.1
LIG1-208ENST00000595758 PRELID2Q8N945 189 aa14.4□□□□□ -0.1
LIG1-208ENST00000595758 TMEM145Q8NBT3 493 aa14.4□□□□□ -0.1
LIG1-208ENST00000595758 RTP4Q96DX8 246 aa14.4□□□□□ -0.1
LIG1-208ENST00000595758 PPP1R2P1Q96PQ5 205 aa14.4□□□□□ -0.1
LIG1-208ENST00000595758 KLF6Q99612 283 aaPredicted RBP14.4□□□□□ -0.1
LIG1-208ENST00000595758 MLPHQ9BV36 600 aaPredicted RBP14.4□□□□□ -0.1
LIG1-208ENST00000595758 DRG1Q9Y295 367 aaKnown RBP14.4□□□□□ -0.1
LIG1-208ENST00000595758 COQ6Q9Y2Z9 468 aa14.4□□□□□ -0.1
LIG1-208ENST00000595758 HS3ST3A1Q9Y663 406 aa14.4□□□□□ -0.1
LIG1-208ENST00000595758 DOCK9Q9BZ29 2069 aa14.4□□□□□ -0.1
LIG1-208ENST00000595758 CACNA1EQ15878 2313 aa14.4□□□□□ -0.11
LIG1-208ENST00000595758 LOC285095A0A1B0GVY8 99 aa14.39□□□□□ -0.11
LIG1-208ENST00000595758 LNP1A1A4G5 178 aa14.39□□□□□ -0.11
LIG1-208ENST00000595758 CAPN8A6NHC0 703 aa14.39□□□□□ -0.11
LIG1-208ENST00000595758 TLR4O00206 839 aa14.39□□□□□ -0.11
LIG1-208ENST00000595758 FPGTO14772 594 aa14.39□□□□□ -0.11
LIG1-208ENST00000595758 ZNF185O15231 689 aa14.39□□□□□ -0.11
LIG1-208ENST00000595758 RECQL5O94762 991 aaPredicted RBP14.39□□□□□ -0.11
LIG1-208ENST00000595758 IFNB1P01574 187 aa14.39□□□□□ -0.11
LIG1-208ENST00000595758 WNT1P04628 370 aa14.39□□□□□ -0.11
LIG1-208ENST00000595758 ENGP17813 658 aa14.39□□□□□ -0.11
LIG1-208ENST00000595758 LHCGRP22888 699 aa14.39□□□□□ -0.11
LIG1-208ENST00000595758 CLDN2P57739 230 aa14.39□□□□□ -0.11
LIG1-208ENST00000595758 LMNB2Q03252 620 aa14.39□□□□□ -0.11
LIG1-208ENST00000595758 OVGP1Q12889 678 aa14.39□□□□□ -0.11
LIG1-208ENST00000595758 ACOX1Q15067 660 aa14.39□□□□□ -0.11
LIG1-208ENST00000595758 CNGA3Q16281 694 aa14.39□□□□□ -0.11
LIG1-208ENST00000595758 PARP6Q2NL67 630 aa14.39□□□□□ -0.11
LIG1-208ENST00000595758 KIF19Q2TAC6 998 aa14.39□□□□□ -0.11
LIG1-208ENST00000595758 P3H1Q32P28 736 aa14.39□□□□□ -0.11
LIG1-208ENST00000595758 HS1BP3Q53T59 392 aa14.39□□□□□ -0.11
LIG1-208ENST00000595758 PAPD7Q5XG87 772 aaKnown RBP14.39□□□□□ -0.11
LIG1-208ENST00000595758 DENND2CQ68D51 928 aa14.39□□□□□ -0.11
LIG1-208ENST00000595758 CRTC1Q6UUV9 634 aa14.39□□□□□ -0.11
LIG1-208ENST00000595758 TSPAN33Q86UF1 283 aa14.39□□□□□ -0.11
LIG1-208ENST00000595758 IQCHQ86VS3 1027 aa14.39□□□□□ -0.11
LIG1-208ENST00000595758 DENND6BQ8NEG7 585 aa14.39□□□□□ -0.11
LIG1-208ENST00000595758 IPMKQ8NFU5 416 aa14.39□□□□□ -0.11
LIG1-208ENST00000595758 ACTRT1Q8TDG2 376 aa14.39□□□□□ -0.11
LIG1-208ENST00000595758 CENPTQ96BT3 561 aa14.39□□□□□ -0.11
LIG1-208ENST00000595758 KLHDC7BQ96G42 594 aa14.39□□□□□ -0.11
LIG1-208ENST00000595758 MRGPRX2Q96LB1 330 aa14.39□□□□□ -0.11
LIG1-208ENST00000595758 GTPBP2Q9BX10 602 aaKnown RBP14.39□□□□□ -0.11
LIG1-208ENST00000595758 AP1M1Q9BXS5 423 aa14.39□□□□□ -0.11
LIG1-208ENST00000595758 ZDHHC5Q9C0B5 715 aa14.39□□□□□ -0.11
LIG1-208ENST00000595758 ANKRD6Q9Y2G4 727 aa14.39□□□□□ -0.11
LIG1-208ENST00000595758 AAR2Q9Y312 384 aaKnown RBP14.39□□□□□ -0.11
LIG1-208ENST00000595758 GOLGA8CPA6NN73 597 aa14.38□□□□□ -0.11
LIG1-208ENST00000595758 H0Y8X5 98 aa14.38□□□□□ -0.11
LIG1-208ENST00000595758 PSMD11O00231 422 aa14.38□□□□□ -0.11
LIG1-208ENST00000595758 HOXD11P31277 338 aaPredicted RBP14.38□□□□□ -0.11
LIG1-208ENST00000595758 ACTN2P35609 894 aa14.38□□□□□ -0.11
LIG1-208ENST00000595758 KCNJ1P48048 391 aa14.38□□□□□ -0.11
LIG1-208ENST00000595758 ATXN3P54252 364 aaPredicted RBP14.38□□□□□ -0.11
LIG1-208ENST00000595758 BNC1Q01954 994 aa14.38□□□□□ -0.11
LIG1-208ENST00000595758 GRIK2Q13002 908 aa14.38□□□□□ -0.11
LIG1-208ENST00000595758 LRRC14Q15048 493 aa14.38□□□□□ -0.11
LIG1-208ENST00000595758 AGERQ15109 404 aa14.38□□□□□ -0.11
LIG1-208ENST00000595758 WSCD2Q2TBF2 565 aa14.38□□□□□ -0.11
LIG1-208ENST00000595758 LRRC66Q68CR7 880 aa14.38□□□□□ -0.11
LIG1-208ENST00000595758 IL27RAQ6UWB1 636 aa14.38□□□□□ -0.11
LIG1-208ENST00000595758 GCNT7Q6ZNI0 430 aa14.38□□□□□ -0.11
LIG1-208ENST00000595758 GSTA5Q7RTV2 222 aa14.38□□□□□ -0.11
LIG1-208ENST00000595758 HSD11B1LQ7Z5J1 315 aa14.38□□□□□ -0.11
LIG1-208ENST00000595758 ABI3BPQ7Z7G0 1075 aa14.38□□□□□ -0.11
LIG1-208ENST00000595758 CBARPQ8N350 705 aaPredicted RBP14.38□□□□□ -0.11
LIG1-208ENST00000595758 CCDC89Q8N998 374 aa14.38□□□□□ -0.11
LIG1-208ENST00000595758 TP53I13Q8NBR0 393 aaPredicted RBP14.38□□□□□ -0.11
LIG1-208ENST00000595758 FAM174AQ8TBP5 190 aa14.38□□□□□ -0.11
LIG1-208ENST00000595758 TRIM44Q96DX7 344 aaPredicted RBP14.38□□□□□ -0.11
LIG1-208ENST00000595758 BMFQ96LC9 184 aa14.38□□□□□ -0.11
LIG1-208ENST00000595758 COQ10AQ96MF6 247 aa14.38□□□□□ -0.11
LIG1-208ENST00000595758 LYSMD1Q96S90 227 aa14.38□□□□□ -0.11
LIG1-208ENST00000595758 GORASP1Q9BQQ3 440 aa14.38□□□□□ -0.11
LIG1-208ENST00000595758 EDEM2Q9BV94 578 aa14.38□□□□□ -0.11
LIG1-208ENST00000595758 FSD1LQ9BXM9 530 aa14.38□□□□□ -0.11
LIG1-208ENST00000595758 RXFP3Q9NSD7 469 aa14.38□□□□□ -0.11
LIG1-208ENST00000595758 SMARCAL1Q9NZC9 954 aa14.38□□□□□ -0.11
LIG1-208ENST00000595758 SNX11Q9Y5W9 270 aa14.38□□□□□ -0.11
LIG1-208ENST00000595758 SAR1BQ9Y6B6 198 aa14.38□□□□□ -0.11
LIG1-208ENST00000595758 PLXNA2O75051 1894 aa14.38□□□□□ -0.11
LIG1-208ENST00000595758 GOLGA6L10A0A0M3HER8 536 aa14.37□□□□□ -0.11
LIG1-208ENST00000595758 A0A0U1RQS6 177 aa14.37□□□□□ -0.11
LIG1-208ENST00000595758 C1orf232A0A0U1RR37 186 aa14.37□□□□□ -0.11
LIG1-208ENST00000595758 GOLGA6CA6NDK9 693 aa14.37□□□□□ -0.11
LIG1-208ENST00000595758 GOLGA6BA6NDN3 693 aa14.37□□□□□ -0.11
LIG1-208ENST00000595758 POM121BA6NF01 834 aa14.37□□□□□ -0.11
LIG1-208ENST00000595758 A6NNZ2 444 aa14.37□□□□□ -0.11
LIG1-208ENST00000595758 GDF9O60383 454 aa14.37□□□□□ -0.11
LIG1-208ENST00000595758 MAGEC1O60732 1142 aa14.37□□□□□ -0.11
LIG1-208ENST00000595758 CLDN7O95471 211 aa14.37□□□□□ -0.11
LIG1-208ENST00000595758 METTL18O95568 372 aa14.37□□□□□ -0.11
LIG1-208ENST00000595758 AGTP01019 485 aa14.37□□□□□ -0.11
LIG1-208ENST00000595758 ATXN1LP0C7T5 689 aaKnown RBP14.37□□□□□ -0.11
LIG1-208ENST00000595758 PIRTP0C851 137 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms