RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 LIPIQ6XZB0 460 aa15.16■□□□□ 0.02
TRIM28-205ENST00000595028 TMTC1Q8IUR5 882 aa15.16■□□□□ 0.02
TRIM28-205ENST00000595028 LRRN4Q8WUT4 740 aa15.16■□□□□ 0.02
TRIM28-205ENST00000595028 OLFM3Q96PB7 478 aa15.16■□□□□ 0.02
TRIM28-205ENST00000595028 MCCC1Q96RQ3 725 aaPredicted RBP15.16■□□□□ 0.02
TRIM28-205ENST00000595028 RBM22Q9NW64 420 aaKnown RBP eCLIP15.16■□□□□ 0.02
TRIM28-205ENST00000595028 NLGN3Q9NZ94 848 aa15.16■□□□□ 0.02
TRIM28-205ENST00000595028 KLF15Q9UIH9 416 aa15.16■□□□□ 0.02
TRIM28-205ENST00000595028 PHTF1Q9UMS5 762 aa15.16■□□□□ 0.02
TRIM28-205ENST00000595028 TTLL3Q9Y4R7 772 aa15.16■□□□□ 0.02
TRIM28-205ENST00000595028 HEY1Q9Y5J3 304 aa15.16■□□□□ 0.02
TRIM28-205ENST00000595028 RAI2Q9Y5P3 530 aa15.16■□□□□ 0.02
TRIM28-205ENST00000595028 EPN1Q9Y6I3 576 aaPredicted RBP15.16■□□□□ 0.02
TRIM28-205ENST00000595028 URB1O60287 2271 aaKnown RBP15.16■□□□□ 0.02
TRIM28-205ENST00000595028 NEBLO76041 1014 aa15.15■□□□□ 0.02
TRIM28-205ENST00000595028 HEXIM1O94992 359 aaKnown RBP15.15■□□□□ 0.02
TRIM28-205ENST00000595028 IPO7O95373 1038 aaKnown RBP15.15■□□□□ 0.02
TRIM28-205ENST00000595028 PRB1P04280 392 aa15.15■□□□□ 0.02
TRIM28-205ENST00000595028 C1SP09871 688 aa15.15■□□□□ 0.02
TRIM28-205ENST00000595028 ALPPL2P10696 532 aa15.15■□□□□ 0.02
TRIM28-205ENST00000595028 CYP2A6P11509 494 aaPredicted RBP15.15■□□□□ 0.02
TRIM28-205ENST00000595028 CCNB1P14635 433 aa15.15■□□□□ 0.02
TRIM28-205ENST00000595028 ZFXP17010 805 aaPredicted RBP15.15■□□□□ 0.02
TRIM28-205ENST00000595028 JUNDP17535 347 aa15.15■□□□□ 0.02
TRIM28-205ENST00000595028 VIPR1P32241 457 aa15.15■□□□□ 0.02
TRIM28-205ENST00000595028 ITKQ08881 620 aa15.15■□□□□ 0.02
TRIM28-205ENST00000595028 C19orf57Q0VDD7 668 aa15.15■□□□□ 0.02
TRIM28-205ENST00000595028 MTM1Q13496 603 aa15.15■□□□□ 0.02
TRIM28-205ENST00000595028 NFATC4Q14934 902 aa15.15■□□□□ 0.02
TRIM28-205ENST00000595028 TAZQ16635 292 aa15.15■□□□□ 0.02
TRIM28-205ENST00000595028 HS1BP3Q53T59 392 aa15.15■□□□□ 0.02
TRIM28-205ENST00000595028 ODF2Q5BJF6 829 aa15.15■□□□□ 0.02
TRIM28-205ENST00000595028 ARMC12Q5T9G4 340 aa15.15■□□□□ 0.02
TRIM28-205ENST00000595028 DHRS13Q6UX07 377 aa15.15■□□□□ 0.02
TRIM28-205ENST00000595028 MFSD7Q6UXD7 560 aa15.15■□□□□ 0.02
TRIM28-205ENST00000595028 CCNI2Q6ZMN8 369 aaPredicted RBP15.15■□□□□ 0.02
TRIM28-205ENST00000595028 TMPRSS7Q7RTY8 843 aa15.15■□□□□ 0.02
TRIM28-205ENST00000595028 RFX6Q8HWS3 928 aa15.15■□□□□ 0.02
TRIM28-205ENST00000595028 PHACTR4Q8IZ21 702 aa15.15■□□□□ 0.02
TRIM28-205ENST00000595028 RBFAQ8N0V3 343 aa15.15■□□□□ 0.02
TRIM28-205ENST00000595028 CCNYQ8ND76 341 aa15.15■□□□□ 0.02
TRIM28-205ENST00000595028 RNF25Q96BH1 459 aaPredicted RBP15.15■□□□□ 0.02
TRIM28-205ENST00000595028 LGMNQ99538 433 aa15.15■□□□□ 0.02
TRIM28-205ENST00000595028 MAK16Q9BXY0 300 aaKnown RBP15.15■□□□□ 0.02
TRIM28-205ENST00000595028 APOBEC3BQ9UH17 382 aaKnown RBP15.15■□□□□ 0.02
TRIM28-205ENST00000595028 PNMA8BQ9ULN7 279 aaPredicted RBP15.15■□□□□ 0.02
TRIM28-205ENST00000595028 ALG6Q9Y672 507 aa15.15■□□□□ 0.02
TRIM28-205ENST00000595028 NEMP2A6NFY4 417 aa15.14■□□□□ 0.01
TRIM28-205ENST00000595028 NPIPB15A6NHN6 443 aaPredicted RBP15.14■□□□□ 0.01
TRIM28-205ENST00000595028 A8MX80 341 aa15.14■□□□□ 0.01
TRIM28-205ENST00000595028 KCNK1O00180 336 aa15.14■□□□□ 0.01
TRIM28-205ENST00000595028 SCAMP1O15126 338 aa15.14■□□□□ 0.01
TRIM28-205ENST00000595028 AQP9O43315 295 aa15.14■□□□□ 0.01
TRIM28-205ENST00000595028 FZD6O60353 706 aa15.14■□□□□ 0.01
TRIM28-205ENST00000595028 CKMT2P17540 419 aa15.14■□□□□ 0.01
TRIM28-205ENST00000595028 LHCGRP22888 699 aa15.14■□□□□ 0.01
TRIM28-205ENST00000595028 CES1P23141 567 aa15.14■□□□□ 0.01
TRIM28-205ENST00000595028 CDKN2BP42772 138 aa15.14■□□□□ 0.01
TRIM28-205ENST00000595028 MARCKSL1P49006 195 aa15.14■□□□□ 0.01
TRIM28-205ENST00000595028 PEX5P50542 639 aa15.14■□□□□ 0.01
TRIM28-205ENST00000595028 DYNLT1P63172 113 aa15.14■□□□□ 0.01
TRIM28-205ENST00000595028 IFI35P80217 286 aaPredicted RBP15.14■□□□□ 0.01
TRIM28-205ENST00000595028 ZBTB17Q13105 803 aa15.14■□□□□ 0.01
TRIM28-205ENST00000595028 IHHQ14623 411 aa15.14■□□□□ 0.01
TRIM28-205ENST00000595028 INPP5AQ14642 412 aa15.14■□□□□ 0.01
TRIM28-205ENST00000595028 ACOX1Q15067 660 aa15.14■□□□□ 0.01
TRIM28-205ENST00000595028 PDK1Q15118 436 aa15.14■□□□□ 0.01
TRIM28-205ENST00000595028 SMAD1Q15797 465 aaKnown RBP15.14■□□□□ 0.01
TRIM28-205ENST00000595028 RAD9BQ6WBX8 426 aa15.14■□□□□ 0.01
TRIM28-205ENST00000595028 USP45Q70EL2 814 aa15.14■□□□□ 0.01
TRIM28-205ENST00000595028 GALNT15Q8N3T1 639 aa15.14■□□□□ 0.01
TRIM28-205ENST00000595028 ARRDC2Q8TBH0 407 aa15.14■□□□□ 0.01
TRIM28-205ENST00000595028 BTN2A2Q8WVV5 523 aa15.14■□□□□ 0.01
TRIM28-205ENST00000595028 PIH1D2Q8WWB5 315 aa15.14■□□□□ 0.01
TRIM28-205ENST00000595028 TBATAQ96M53 351 aa15.14■□□□□ 0.01
TRIM28-205ENST00000595028 COQ10AQ96MF6 247 aa15.14■□□□□ 0.01
TRIM28-205ENST00000595028 IL12RB2Q99665 862 aa15.14■□□□□ 0.01
TRIM28-205ENST00000595028 APOOQ9BUR5 198 aa15.14■□□□□ 0.01
TRIM28-205ENST00000595028 LRRC61Q9BV99 259 aa15.14■□□□□ 0.01
TRIM28-205ENST00000595028 DUSP23Q9BVJ7 150 aa15.14■□□□□ 0.01
TRIM28-205ENST00000595028 TDRD1Q9BXT4 1180 aaKnown RBP15.14■□□□□ 0.01
TRIM28-205ENST00000595028 TCEAL2Q9H3H9 227 aaPredicted RBP15.14■□□□□ 0.01
TRIM28-205ENST00000595028 REXO2Q9Y3B8 237 aaKnown RBP15.14■□□□□ 0.01
TRIM28-205ENST00000595028 OR1A2Q9Y585 309 aa15.14■□□□□ 0.01
TRIM28-205ENST00000595028 CSNK1G3Q9Y6M4 447 aa15.14■□□□□ 0.01
TRIM28-205ENST00000595028 ZNF462Q96JM2 2506 aa15.14■□□□□ 0.01
TRIM28-205ENST00000595028 RCCD1A6NED2 376 aa15.13■□□□□ 0.01
TRIM28-205ENST00000595028 K7ESM1 405 aa15.13■□□□□ 0.01
TRIM28-205ENST00000595028 PSMD11O00231 422 aa15.13■□□□□ 0.01
TRIM28-205ENST00000595028 PPP1R12AO14974 1030 aaPredicted RBP15.13■□□□□ 0.01
TRIM28-205ENST00000595028 PDHA1P08559 390 aa15.13■□□□□ 0.01
TRIM28-205ENST00000595028 CDK4P11802 303 aa15.13■□□□□ 0.01
TRIM28-205ENST00000595028 CA4P22748 312 aa15.13■□□□□ 0.01
TRIM28-205ENST00000595028 ACP1P24666 158 aa15.13■□□□□ 0.01
TRIM28-205ENST00000595028 HTR1BP28222 390 aa15.13■□□□□ 0.01
TRIM28-205ENST00000595028 CDC25BP30305 580 aa15.13■□□□□ 0.01
TRIM28-205ENST00000595028 KIAA1024LP59773 190 aa15.13■□□□□ 0.01
TRIM28-205ENST00000595028 DAB2P98082 770 aa15.13■□□□□ 0.01
TRIM28-205ENST00000595028 NIPAL4Q0D2K0 466 aa15.13■□□□□ 0.01
TRIM28-205ENST00000595028 ILKQ13418 452 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms