RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 TPM1P09493 284 aa23.54■■□□□ 1.36
LSM4-204ENST00000594828 GM2AP17900 193 aa23.54■■□□□ 1.36
LSM4-204ENST00000594828 GARSP41250 739 aaKnown RBP23.54■■□□□ 1.36
LSM4-204ENST00000594828 KIAA1024LP59773 190 aa23.54■■□□□ 1.36
LSM4-204ENST00000594828 TRAF2Q12933 501 aa23.54■■□□□ 1.36
LSM4-204ENST00000594828 PAFAH1B3Q15102 231 aaKnown RBP23.54■■□□□ 1.36
LSM4-204ENST00000594828 TCEA2Q15560 299 aa23.54■■□□□ 1.36
LSM4-204ENST00000594828 NCBP2-AS2Q69YL0 99 aa23.54■■□□□ 1.36
LSM4-204ENST00000594828 NYAP1Q6ZVC0 841 aa23.54■■□□□ 1.36
LSM4-204ENST00000594828 GKN2Q86XP6 184 aa23.54■■□□□ 1.36
LSM4-204ENST00000594828 TEX26Q8N6G2 289 aa23.54■■□□□ 1.36
LSM4-204ENST00000594828 NAT6Q93015 286 aa23.54■■□□□ 1.36
LSM4-204ENST00000594828 ZNF670Q9BS34 389 aa23.54■■□□□ 1.36
LSM4-204ENST00000594828 TSPY26PQ9H489 355 aa23.54■■□□□ 1.36
LSM4-204ENST00000594828 GULP1Q9UBP9 304 aa23.54■■□□□ 1.36
LSM4-204ENST00000594828 PADI4Q9UM07 663 aa23.54■■□□□ 1.36
LSM4-204ENST00000594828 URB1O60287 2271 aaKnown RBP23.53■■□□□ 1.36
LSM4-204ENST00000594828 TLX3O43711 291 aaPredicted RBP23.53■■□□□ 1.36
LSM4-204ENST00000594828 USP12O75317 370 aa23.53■■□□□ 1.36
LSM4-204ENST00000594828 HOXC4P09017 264 aaPredicted RBP23.53■■□□□ 1.36
LSM4-204ENST00000594828 CYP2A6P11509 494 aaPredicted RBP23.53■■□□□ 1.36
LSM4-204ENST00000594828 KELP23276 732 aa23.53■■□□□ 1.36
LSM4-204ENST00000594828 VIPR1P32241 457 aa23.53■■□□□ 1.36
LSM4-204ENST00000594828 TRIM23P36406 574 aa23.53■■□□□ 1.36
LSM4-204ENST00000594828 TAS2R40P59535 323 aa23.53■■□□□ 1.36
LSM4-204ENST00000594828 ITKQ08881 620 aa23.53■■□□□ 1.36
LSM4-204ENST00000594828 GALNT2Q10471 571 aa23.53■■□□□ 1.36
LSM4-204ENST00000594828 CNGA3Q16281 694 aa23.53■■□□□ 1.36
LSM4-204ENST00000594828 PERM1Q5SV97 790 aa23.53■■□□□ 1.36
LSM4-204ENST00000594828 ARMC12Q5T9G4 340 aa23.53■■□□□ 1.36
LSM4-204ENST00000594828 PNCKQ6P2M8 343 aa23.53■■□□□ 1.36
LSM4-204ENST00000594828 CRTC1Q6UUV9 634 aa23.53■■□□□ 1.36
LSM4-204ENST00000594828 OR56A4Q8NGH8 313 aa23.53■■□□□ 1.36
LSM4-204ENST00000594828 COQ10AQ96MF6 247 aa23.53■■□□□ 1.36
LSM4-204ENST00000594828 KCTD5Q9NXV2 234 aa23.53■■□□□ 1.36
LSM4-204ENST00000594828 DGKBQ9Y6T7 804 aa23.53■■□□□ 1.36
LSM4-204ENST00000594828 APC2O95996 2303 aa23.52■■□□□ 1.36
LSM4-204ENST00000594828 ACACAQ13085 2346 aa23.52■■□□□ 1.36
LSM4-204ENST00000594828 TMEM202A6NGA9 273 aa23.52■■□□□ 1.36
LSM4-204ENST00000594828 HEXIM1O94992 359 aaKnown RBP23.52■■□□□ 1.36
LSM4-204ENST00000594828 PGLSO95336 258 aa23.52■■□□□ 1.36
LSM4-204ENST00000594828 TMEM253P0C7T8 217 aa23.52■■□□□ 1.36
LSM4-204ENST00000594828 ACTN2P35609 894 aa23.52■■□□□ 1.36
LSM4-204ENST00000594828 EIF2S3P41091 472 aaKnown RBP23.52■■□□□ 1.36
LSM4-204ENST00000594828 ZFYVE27Q5T4F4 411 aa23.52■■□□□ 1.36
LSM4-204ENST00000594828 DENND2CQ68D51 928 aa23.52■■□□□ 1.36
LSM4-204ENST00000594828 TIGD7Q6NT04 549 aaPredicted RBP23.52■■□□□ 1.36
LSM4-204ENST00000594828 PDZD3Q86UT5 571 aa23.52■■□□□ 1.36
LSM4-204ENST00000594828 VSTM4Q8IW00 320 aa23.52■■□□□ 1.36
LSM4-204ENST00000594828 ARL10Q8N8L6 244 aa23.52■■□□□ 1.36
LSM4-204ENST00000594828 FGF11Q92914 225 aa23.52■■□□□ 1.36
LSM4-204ENST00000594828 NUS1Q96E22 293 aa23.52■■□□□ 1.36
LSM4-204ENST00000594828 SCRN2Q96FV2 425 aa23.52■■□□□ 1.36
LSM4-204ENST00000594828 PDXPQ96GD0 296 aa23.52■■□□□ 1.36
LSM4-204ENST00000594828 SEMA3CQ99985 751 aa23.52■■□□□ 1.36
LSM4-204ENST00000594828 SIRPGQ9P1W8 387 aa23.52■■□□□ 1.36
LSM4-204ENST00000594828 ANKRD11Q6UB99 2663 aaPredicted RBP23.52■■□□□ 1.36
LSM4-204ENST00000594828 TNFRSF10CO14798 259 aa23.51■■□□□ 1.35
LSM4-204ENST00000594828 MAP3K6O95382 1288 aa23.51■■□□□ 1.35
LSM4-204ENST00000594828 CCNCP24863 283 aa23.51■■□□□ 1.35
LSM4-204ENST00000594828 MAN1A1P33908 653 aa23.51■■□□□ 1.35
LSM4-204ENST00000594828 IFI16Q16666 785 aaKnown RBP23.51■■□□□ 1.35
LSM4-204ENST00000594828 ISXQ2M1V0 245 aa23.51■■□□□ 1.35
LSM4-204ENST00000594828 KCTD16Q68DU8 428 aa23.51■■□□□ 1.35
LSM4-204ENST00000594828 LRRC69Q6ZNQ3 347 aa23.51■■□□□ 1.35
LSM4-204ENST00000594828 CBARPQ8N350 705 aaPredicted RBP23.51■■□□□ 1.35
LSM4-204ENST00000594828 OR1E3Q8WZA6 343 aa23.51■■□□□ 1.35
LSM4-204ENST00000594828 RBM15Q96T37 977 aaKnown RBP eCLIP23.51■■□□□ 1.35
LSM4-204ENST00000594828 CHP1Q99653 195 aa23.51■■□□□ 1.35
LSM4-204ENST00000594828 LGR4Q9BXB1 951 aa23.51■■□□□ 1.35
LSM4-204ENST00000594828 POLR1EQ9GZS1 481 aaKnown RBP23.51■■□□□ 1.35
LSM4-204ENST00000594828 WDR26Q9H7D7 661 aa23.51■■□□□ 1.35
LSM4-204ENST00000594828 MRPL40Q9NQ50 206 aaKnown RBP23.51■■□□□ 1.35
LSM4-204ENST00000594828 ABHD10Q9NUJ1 306 aa23.51■■□□□ 1.35
LSM4-204ENST00000594828 GPR34Q9UPC5 381 aa23.51■■□□□ 1.35
LSM4-204ENST00000594828 RAI2Q9Y5P3 530 aa23.51■■□□□ 1.35
LSM4-204ENST00000594828 PDE2AO00408 941 aaPredicted RBP23.5■■□□□ 1.35
LSM4-204ENST00000594828 MATN3O15232 486 aa23.5■■□□□ 1.35
LSM4-204ENST00000594828 RRP8O43159 456 aaKnown RBP23.5■■□□□ 1.35
LSM4-204ENST00000594828 MPOP05164 745 aa23.5■■□□□ 1.35
LSM4-204ENST00000594828 ARHGEF7Q14155 803 aa23.5■■□□□ 1.35
LSM4-204ENST00000594828 MESDQ14696 234 aa23.5■■□□□ 1.35
LSM4-204ENST00000594828 TBC1D25Q3MII6 688 aa23.5■■□□□ 1.35
LSM4-204ENST00000594828 USP45Q70EL2 814 aa23.5■■□□□ 1.35
LSM4-204ENST00000594828 LSMEM2Q8N112 164 aa23.5■■□□□ 1.35
LSM4-204ENST00000594828 NDUFAF2Q8N183 169 aa23.5■■□□□ 1.35
LSM4-204ENST00000594828 PELI3Q8N2H9 469 aa23.5■■□□□ 1.35
LSM4-204ENST00000594828 RNF214Q8ND24 703 aa23.5■■□□□ 1.35
LSM4-204ENST00000594828 SNIP1Q8TAD8 396 aaKnown RBP23.5■■□□□ 1.35
LSM4-204ENST00000594828 SLC35G2Q8TBE7 412 aa23.5■■□□□ 1.35
LSM4-204ENST00000594828 MAML1Q92585 1016 aa23.5■■□□□ 1.35
LSM4-204ENST00000594828 FAF2Q96CS3 445 aa23.5■■□□□ 1.35
LSM4-204ENST00000594828 CCDC42Q96M95 316 aa23.5■■□□□ 1.35
LSM4-204ENST00000594828 TSGA13Q96PP4 275 aa23.5■■□□□ 1.35
LSM4-204ENST00000594828 CCDC3Q9BQI4 270 aa23.5■■□□□ 1.35
LSM4-204ENST00000594828 FGF22Q9HCT0 170 aa23.5■■□□□ 1.35
LSM4-204ENST00000594828 RBM22Q9NW64 420 aaKnown RBP eCLIP23.5■■□□□ 1.35
LSM4-204ENST00000594828 PPIL1Q9Y3C6 166 aa23.5■■□□□ 1.35
LSM4-204ENST00000594828 SHROOM3Q8TF72 1996 aa23.5■■□□□ 1.35
LSM4-204ENST00000594828 DSPP15924 2871 aaKnown RBP23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms