RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 A0A1W2PQ67 120 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 CAPN8A6NHC0 703 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 CCL22O00626 93 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 RRP9O43818 475 aaKnown RBP20.84■□□□□ 0.93
PNKP-203ENST00000593946 MT-ND3P03897 115 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 HNRNPA1L2Q32P51 320 aaKnown RBP20.84■□□□□ 0.93
PNKP-203ENST00000593946 MROH9Q5TGP6 573 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 GDPD4Q6W3E5 623 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 PAF1Q8N7H5 531 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 ZNF366Q8N895 744 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 OR4K2Q8NGD2 314 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 GRIN3AQ8TCU5 1115 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 CALML6Q8TD86 181 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 CSGALNACT1Q8TDX6 532 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 SERAC1Q96JX3 654 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 SRPK1Q96SB4 655 aaKnown RBP20.84■□□□□ 0.93
PNKP-203ENST00000593946 SMC6Q96SB8 1091 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 SELENOSQ9BQE4 189 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 TMEM245Q9H330 911 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 CKAP5Q14008 2032 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 LEFTY1O75610 366 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 APODP05090 189 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 CTSLP07711 333 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 ITGA2BP08514 1039 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 KRT4P19013 534 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 SLC1A2P43004 574 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 SOX9P48436 509 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 LIMK2P53671 638 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 TMPRSS15P98073 1019 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 DNAJC3Q13217 504 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 GLIPR1L2Q4G1C9 344 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 ZNF470Q6ECI4 717 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 TIFABQ6ZNK6 161 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 SH2D5Q6ZV89 423 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 MICALCLQ6ZW33 695 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 Q7L0L9 218 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 DENND6AQ8IWF6 608 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 C4orf33Q8N1A6 199 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 C2CD4AQ8NCU7 369 aaPredicted RBP20.84■□□□□ 0.93
PNKP-203ENST00000593946 OR6P1Q8NGX9 317 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 CDKN2AIPNLQ96HQ2 116 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 LRIG1Q96JA1 1093 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 LYSMD1Q96S90 227 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 SSU72Q9NP77 194 aaKnown RBP20.84■□□□□ 0.93
PNKP-203ENST00000593946 POLR3BQ9NW08 1133 aaPredicted RBP20.84■□□□□ 0.93
PNKP-203ENST00000593946 IL36AQ9UHA7 158 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 HCN2Q9UL51 889 aa20.84■□□□□ 0.93
PNKP-203ENST00000593946 EDDM13A0A1B0GTR0 161 aa20.83■□□□□ 0.92
PNKP-203ENST00000593946 TMEM120BA0PK00 339 aa20.83■□□□□ 0.92
PNKP-203ENST00000593946 RFPL1O75677 317 aa20.83■□□□□ 0.92
PNKP-203ENST00000593946 F7P08709 466 aaPredicted RBP20.83■□□□□ 0.92
PNKP-203ENST00000593946 SPRP35270 261 aaPredicted RBP20.83■□□□□ 0.92
PNKP-203ENST00000593946 HNF1BP35680 557 aa20.83■□□□□ 0.92
PNKP-203ENST00000593946 HMGCLP35914 325 aa20.83■□□□□ 0.92
PNKP-203ENST00000593946 CTBP1Q13363 440 aa20.83■□□□□ 0.92
PNKP-203ENST00000593946 SKIV2LQ15477 1246 aaKnown RBP20.83■□□□□ 0.92
PNKP-203ENST00000593946 CDKN3Q16667 212 aa20.83■□□□□ 0.92
PNKP-203ENST00000593946 UGP2Q16851 508 aa20.83■□□□□ 0.92
PNKP-203ENST00000593946 KIAA0408Q6ZU52 694 aa20.83■□□□□ 0.92
PNKP-203ENST00000593946 LYSMD3Q7Z3D4 306 aa20.83■□□□□ 0.92
PNKP-203ENST00000593946 LMNTD2Q8IXW0 634 aa20.83■□□□□ 0.92
PNKP-203ENST00000593946 GABPB2Q8TAK5 448 aaPredicted RBP20.83■□□□□ 0.92
PNKP-203ENST00000593946 EID2BQ96D98 161 aa20.83■□□□□ 0.92
PNKP-203ENST00000593946 KLHL32Q96NJ5 620 aa20.83■□□□□ 0.92
PNKP-203ENST00000593946 MCCC1Q96RQ3 725 aaPredicted RBP20.83■□□□□ 0.92
PNKP-203ENST00000593946 OSBPL1AQ9BXW6 950 aa20.83■□□□□ 0.92
PNKP-203ENST00000593946 SUDS3Q9H7L9 328 aaPredicted RBP20.83■□□□□ 0.92
PNKP-203ENST00000593946 TRPV5Q9NQA5 729 aa20.83■□□□□ 0.92
PNKP-203ENST00000593946 THAP10Q9P2Z0 257 aaPredicted RBP20.83■□□□□ 0.92
PNKP-203ENST00000593946 FBXO5Q9UKT4 447 aa20.83■□□□□ 0.92
PNKP-203ENST00000593946 A0A0U1RQS6 177 aa20.82■□□□□ 0.92
PNKP-203ENST00000593946 TSPAN11A1L157 253 aa20.82■□□□□ 0.92
PNKP-203ENST00000593946 CCDC162PA2VCL2 907 aa20.82■□□□□ 0.92
PNKP-203ENST00000593946 PRPF4O43172 522 aaKnown RBP eCLIP20.82■□□□□ 0.926e-7■■■■□ 23.2
PNKP-203ENST00000593946 GOT2P00505 430 aaKnown RBP20.82■□□□□ 0.92
PNKP-203ENST00000593946 SLC4A1P02730 911 aa20.82■□□□□ 0.92
PNKP-203ENST00000593946 GABRB3P28472 473 aa20.82■□□□□ 0.92
PNKP-203ENST00000593946 ARSIQ5FYB1 569 aa20.82■□□□□ 0.92
PNKP-203ENST00000593946 BRAT1Q6PJG6 821 aa20.82■□□□□ 0.92
PNKP-203ENST00000593946 NUDT18Q6ZVK8 323 aa20.82■□□□□ 0.92
PNKP-203ENST00000593946 PTAR1Q7Z6K3 402 aaPredicted RBP20.82■□□□□ 0.92
PNKP-203ENST00000593946 ZC3HC1Q86WB0 502 aaKnown RBP20.82■□□□□ 0.92
PNKP-203ENST00000593946 SUGP1Q8IWZ8 645 aaKnown RBP20.82■□□□□ 0.92
PNKP-203ENST00000593946 MDM1Q8TC05 714 aa20.82■□□□□ 0.92
PNKP-203ENST00000593946 SCRN2Q96FV2 425 aa20.82■□□□□ 0.92
PNKP-203ENST00000593946 C19orf43Q9BQ61 176 aa20.82■□□□□ 0.92
PNKP-203ENST00000593946 PHF7Q9BWX1 381 aaPredicted RBP20.82■□□□□ 0.92
PNKP-203ENST00000593946 GPR63Q9BZJ6 419 aa20.82■□□□□ 0.92
PNKP-203ENST00000593946 RHOJQ9H4E5 214 aa20.82■□□□□ 0.92
PNKP-203ENST00000593946 KCNK12Q9HB15 430 aa20.82■□□□□ 0.92
PNKP-203ENST00000593946 FBRSL1Q9HCM7 1045 aaKnown RBP20.82■□□□□ 0.92
PNKP-203ENST00000593946 IL17CQ9P0M4 197 aa20.82■□□□□ 0.92
PNKP-203ENST00000593946 ATG2BQ96BY7 2078 aa20.82■□□□□ 0.92
PNKP-203ENST00000593946 OR51F1A6NGY5 319 aa20.81■□□□□ 0.92
PNKP-203ENST00000593946 TYROBPO43914 113 aa20.81■□□□□ 0.92
PNKP-203ENST00000593946 AHSGP02765 367 aa20.81■□□□□ 0.92
PNKP-203ENST00000593946 ALDOAP04075 364 aaKnown RBP20.81■□□□□ 0.92
PNKP-203ENST00000593946 HLA-EP13747 358 aa20.81■□□□□ 0.92
PNKP-203ENST00000593946 MPP1Q00013 466 aa20.81■□□□□ 0.92
PNKP-203ENST00000593946 SLC18A2Q05940 514 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms