RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 NT5MQ9NPB1 228 aa13.13□□□□□ -0.31
PRKCSH-218ENST00000593053 ZNHIT6Q9NWK9 470 aaKnown RBP13.13□□□□□ -0.31
PRKCSH-218ENST00000593053 SIRPGQ9P1W8 387 aa13.13□□□□□ -0.31
PRKCSH-218ENST00000593053 GULP1Q9UBP9 304 aa13.13□□□□□ -0.31
PRKCSH-218ENST00000593053 PADI4Q9UM07 663 aa13.13□□□□□ -0.31
PRKCSH-218ENST00000593053 ACACAQ13085 2346 aa13.13□□□□□ -0.31
PRKCSH-218ENST00000593053 SSU72P8A0A1W2PR75 194 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 TMEM202A6NGA9 273 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 AKR1B10O60218 316 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 USP12O75317 370 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 HEXIM1O94992 359 aaKnown RBP13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 MAP3K6O95382 1288 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 TNFP01375 233 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 MPOP05164 745 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 TMEM253P0C7T8 217 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 VIPR1P32241 457 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 GARSP41250 739 aaKnown RBP13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 KIAA1024LP59773 190 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 ITKQ08881 620 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 GALNT2Q10471 571 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 PAFAH1B3Q15102 231 aaKnown RBP13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 PDK2Q15119 407 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 PTPRRQ15256 657 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 TSR1Q2NL82 804 aaKnown RBP13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 ANKRD20A8PQ5CZ79 823 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 RALGPS1Q5JS13 557 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 PNCKQ6P2M8 343 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 PDZD3Q86UT5 571 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 GKN2Q86XP6 184 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 VSTM4Q8IW00 320 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 MAP7D3Q8IWC1 876 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 PELI3Q8N2H9 469 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 TEX26Q8N6G2 289 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 ARL10Q8N8L6 244 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 RNF214Q8ND24 703 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 OR56A4Q8NGH8 313 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 NAT6Q93015 286 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 NUS1Q96E22 293 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 COQ10AQ96MF6 247 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 SEMA3CQ99985 751 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 ZNF670Q9BS34 389 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 TSPY26PQ9H489 355 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 WDR26Q9H7D7 661 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 FGF22Q9HCT0 170 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 PHTF1Q9UMS5 762 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 GPR34Q9UPC5 381 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 DGKBQ9Y6T7 804 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 KNTC1P50748 2209 aa13.12□□□□□ -0.31
PRKCSH-218ENST00000593053 NPIPB15A6NHN6 443 aaPredicted RBP13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 CASC3O15234 703 aaKnown RBP13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 PGLSO95336 258 aa13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 KRT7P08729 469 aa13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 TPM1P09493 284 aa13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 CYP2A6P11509 494 aaPredicted RBP13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 CTPS1P17812 591 aa13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 LHCGRP22888 699 aa13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 KELP23276 732 aa13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 NFKBIAP25963 317 aa13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 ITPKBP27987 946 aa13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 ACTN2P35609 894 aa13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 TRIM23P36406 574 aa13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 EIF2S3P41091 472 aaKnown RBP13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 ETV3P41162 512 aa13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 ABCG1P45844 678 aa13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 GABREP78334 506 aa13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 MESDQ14696 234 aa13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 ISXQ2M1V0 245 aa13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 TBC1D25Q3MII6 688 aa13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 ZFYVE27Q5T4F4 411 aa13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 ARMC12Q5T9G4 340 aa13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 LVRNQ6Q4G3 990 aa13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 USP45Q70EL2 814 aa13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 HSD11B1LQ7Z5J1 315 aa13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 KYQ8NBH2 561 aa13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 TPCN2Q8NHX9 752 aa13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 SNIP1Q8TAD8 396 aaKnown RBP13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 LRRN4Q8WUT4 740 aa13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 FGF11Q92914 225 aa13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 CRELD1Q96HD1 420 aa13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 RBM15Q96T37 977 aaKnown RBP eCLIP13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 CHP1Q99653 195 aa13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 CCDC3Q9BQI4 270 aa13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 LGR4Q9BXB1 951 aa13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 POLR1EQ9GZS1 481 aaKnown RBP13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 SYNDIG1Q9H7V2 258 aa13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 MRPL40Q9NQ50 206 aaKnown RBP13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 ABHD10Q9NUJ1 306 aa13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 SPTLC3Q9NUV7 552 aa13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 LCMT1Q9UIC8 334 aa13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 MOSPD1Q9UJG1 213 aa13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 TTLL3Q9Y4R7 772 aa13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 RAI2Q9Y5P3 530 aa13.11□□□□□ -0.31
PRKCSH-218ENST00000593053 NBEAQ8NFP9 2946 aa13.1□□□□□ -0.31
PRKCSH-218ENST00000593053 TDRD6O60522 2096 aaKnown RBP13.1□□□□□ -0.31
PRKCSH-218ENST00000593053 A0A0U1RQS6 177 aa13.1□□□□□ -0.31
PRKCSH-218ENST00000593053 TNFRSF10CO14798 259 aa13.1□□□□□ -0.31
PRKCSH-218ENST00000593053 MATN3O15232 486 aa13.1□□□□□ -0.31
PRKCSH-218ENST00000593053 RRP8O43159 456 aaKnown RBP13.1□□□□□ -0.31
PRKCSH-218ENST00000593053 MFAP3LO75121 409 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms