RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 CCKBRP32239 447 aa18.93■□□□□ 0.62
CCDC43-205ENST00000592333 VAC14Q08AM6 782 aa18.93■□□□□ 0.62
CCDC43-205ENST00000592333 RD3Q7Z3Z2 195 aa18.93■□□□□ 0.62
CCDC43-205ENST00000592333 TEKT4Q8WW24 435 aa18.93■□□□□ 0.62
CCDC43-205ENST00000592333 SYN2Q92777 582 aaPredicted RBP18.93■□□□□ 0.62
CCDC43-205ENST00000592333 FUBP1Q96AE4 644 aaKnown RBP18.93■□□□□ 0.62
CCDC43-205ENST00000592333 IQCDQ96DY2 449 aa18.93■□□□□ 0.62
CCDC43-205ENST00000592333 GFM1Q96RP9 751 aaKnown RBP18.93■□□□□ 0.62
CCDC43-205ENST00000592333 ACSL6Q9UKU0 697 aa18.93■□□□□ 0.62
CCDC43-205ENST00000592333 LRP4O75096 1905 aa18.93■□□□□ 0.62
CCDC43-205ENST00000592333 GCN1Q92616 2671 aaKnown RBP18.93■□□□□ 0.62
CCDC43-205ENST00000592333 PSMD11O00231 422 aa18.92■□□□□ 0.62
CCDC43-205ENST00000592333 KLK10O43240 276 aa18.92■□□□□ 0.62
CCDC43-205ENST00000592333 CELA2BP08218 269 aaPredicted RBP18.92■□□□□ 0.62
CCDC43-205ENST00000592333 TEAD1P28347 426 aa18.92■□□□□ 0.62
CCDC43-205ENST00000592333 SERPINB6P35237 376 aa18.92■□□□□ 0.62
CCDC43-205ENST00000592333 ZNF165P49910 485 aa18.92■□□□□ 0.62
CCDC43-205ENST00000592333 PEX6Q13608 980 aa18.92■□□□□ 0.62
CCDC43-205ENST00000592333 ZNF235Q14590 738 aa18.92■□□□□ 0.62
CCDC43-205ENST00000592333 NR1I3Q14994 352 aa18.92■□□□□ 0.62
CCDC43-205ENST00000592333 PNCKQ6P2M8 343 aa18.92■□□□□ 0.62
CCDC43-205ENST00000592333 CRTC1Q6UUV9 634 aa18.92■□□□□ 0.62
CCDC43-205ENST00000592333 TMCO3Q6UWJ1 677 aa18.92■□□□□ 0.62
CCDC43-205ENST00000592333 POLNQ7Z5Q5 900 aa18.92■□□□□ 0.62
CCDC43-205ENST00000592333 CBARPQ8N350 705 aaPredicted RBP18.92■□□□□ 0.62
CCDC43-205ENST00000592333 PAF1Q8N7H5 531 aa18.92■□□□□ 0.62
CCDC43-205ENST00000592333 NIPA2Q8N8Q9 360 aa18.92■□□□□ 0.62
CCDC43-205ENST00000592333 KYQ8NBH2 561 aa18.92■□□□□ 0.62
CCDC43-205ENST00000592333 PLA2G15Q8NCC3 412 aa18.92■□□□□ 0.62
CCDC43-205ENST00000592333 NSMCE1Q8WV22 266 aa18.92■□□□□ 0.62
CCDC43-205ENST00000592333 CCDC74AQ96AQ1 378 aa18.92■□□□□ 0.62
CCDC43-205ENST00000592333 NUDCD1Q96RS6 583 aa18.92■□□□□ 0.62
CCDC43-205ENST00000592333 TRIM7Q9C029 511 aa18.92■□□□□ 0.62
CCDC43-205ENST00000592333 WDR26Q9H7D7 661 aa18.92■□□□□ 0.62
CCDC43-205ENST00000592333 TMEM63CQ9P1W3 806 aa18.92■□□□□ 0.62
CCDC43-205ENST00000592333 RCOR3Q9P2K3 495 aaPredicted RBP18.92■□□□□ 0.62
CCDC43-205ENST00000592333 PHTF1Q9UMS5 762 aa18.92■□□□□ 0.62
CCDC43-205ENST00000592333 A0A1W2PQJ5 194 aa18.91■□□□□ 0.62
CCDC43-205ENST00000592333 D6RAR5 112 aa18.91■□□□□ 0.62
CCDC43-205ENST00000592333 PLD2O14939 933 aa18.91■□□□□ 0.62
CCDC43-205ENST00000592333 ZW10O43264 779 aa18.91■□□□□ 0.62
CCDC43-205ENST00000592333 NUDT21O43809 227 aaKnown RBP18.91■□□□□ 0.62
CCDC43-205ENST00000592333 PEX11BO96011 259 aa18.91■□□□□ 0.62
CCDC43-205ENST00000592333 CDH6P55285 790 aa18.91■□□□□ 0.62
CCDC43-205ENST00000592333 SLC10A7Q0GE19 358 aa18.91■□□□□ 0.62
CCDC43-205ENST00000592333 CLPPQ16740 277 aaPredicted RBP18.91■□□□□ 0.62
CCDC43-205ENST00000592333 ARHGAP36Q6ZRI8 547 aa18.91■□□□□ 0.62
CCDC43-205ENST00000592333 PDXPQ96GD0 296 aa18.91■□□□□ 0.62
CCDC43-205ENST00000592333 NAF1Q96HR8 494 aaKnown RBP18.91■□□□□ 0.62
CCDC43-205ENST00000592333 COQ10AQ96MF6 247 aa18.91■□□□□ 0.62
CCDC43-205ENST00000592333 MGME1Q9BQP7 344 aa18.91■□□□□ 0.62
CCDC43-205ENST00000592333 LRRN3Q9H3W5 708 aa18.91■□□□□ 0.62
CCDC43-205ENST00000592333 PPIL1Q9Y3C6 166 aa18.91■□□□□ 0.62
CCDC43-205ENST00000592333 TMEM202A6NGA9 273 aa18.9■□□□□ 0.62
CCDC43-205ENST00000592333 MAFKO60675 156 aa18.9■□□□□ 0.62
CCDC43-205ENST00000592333 TNFSF15O95150 251 aa18.9■□□□□ 0.62
CCDC43-205ENST00000592333 CYP2A6P11509 494 aaPredicted RBP18.9■□□□□ 0.62
CCDC43-205ENST00000592333 MYCLP1P12525 358 aaPredicted RBP18.9■□□□□ 0.62
CCDC43-205ENST00000592333 KRT10P13645 584 aa18.9■□□□□ 0.62
CCDC43-205ENST00000592333 GM2AP17900 193 aa18.9■□□□□ 0.62
CCDC43-205ENST00000592333 INHBCP55103 352 aa18.9■□□□□ 0.62
CCDC43-205ENST00000592333 CERCAMQ5T4B2 595 aa18.9■□□□□ 0.62
CCDC43-205ENST00000592333 E4F1Q66K89 784 aaPredicted RBP18.9■□□□□ 0.62
CCDC43-205ENST00000592333 TAF8Q7Z7C8 310 aa18.9■□□□□ 0.62
CCDC43-205ENST00000592333 RAVER1Q8IY67 606 aaKnown RBP18.9■□□□□ 0.62
CCDC43-205ENST00000592333 KIAA1524Q8TCG1 905 aa18.9■□□□□ 0.62
CCDC43-205ENST00000592333 OR1E3Q8WZA6 343 aa18.9■□□□□ 0.62
CCDC43-205ENST00000592333 SCRN2Q96FV2 425 aa18.9■□□□□ 0.62
CCDC43-205ENST00000592333 CSPG4P5Q96PW8 444 aa18.9■□□□□ 0.62
CCDC43-205ENST00000592333 TEX101Q9BY14 249 aa18.9■□□□□ 0.62
CCDC43-205ENST00000592333 B3GNT4Q9C0J1 378 aa18.9■□□□□ 0.62
CCDC43-205ENST00000592333 FGF22Q9HCT0 170 aa18.9■□□□□ 0.62
CCDC43-205ENST00000592333 PHPT1Q9NRX4 125 aaPredicted RBP18.9■□□□□ 0.62
CCDC43-205ENST00000592333 SIRPGQ9P1W8 387 aa18.9■□□□□ 0.62
CCDC43-205ENST00000592333 IP6K2Q9UHH9 426 aa18.9■□□□□ 0.62
CCDC43-205ENST00000592333 ANKRD36A6QL64 1941 aa18.9■□□□□ 0.62
CCDC43-205ENST00000592333 MGAQ8IWI9 3026 aa18.9■□□□□ 0.62
CCDC43-205ENST00000592333 A0A1W2PQM1 296 aa18.89■□□□□ 0.61
CCDC43-205ENST00000592333 K7ENP7 123 aa18.89■□□□□ 0.61
CCDC43-205ENST00000592333 C1QL1O75973 258 aa18.89■□□□□ 0.61
CCDC43-205ENST00000592333 RPLP0P05388 317 aaKnown RBP18.89■□□□□ 0.61
CCDC43-205ENST00000592333 CES1P23141 567 aa18.89■□□□□ 0.61
CCDC43-205ENST00000592333 IL1R2P27930 398 aa18.89■□□□□ 0.61
CCDC43-205ENST00000592333 VIPR1P32241 457 aa18.89■□□□□ 0.61
CCDC43-205ENST00000592333 CCL7P80098 99 aa18.89■□□□□ 0.61
CCDC43-205ENST00000592333 HLTFQ14527 1009 aaKnown RBP eCLIP18.89■□□□□ 0.61
CCDC43-205ENST00000592333 ACOX1Q15067 660 aa18.89■□□□□ 0.61
CCDC43-205ENST00000592333 C14orf28Q4W4Y0 310 aa18.89■□□□□ 0.61
CCDC43-205ENST00000592333 MARC1Q5VT66 337 aa18.89■□□□□ 0.61
CCDC43-205ENST00000592333 INO80CQ6PI98 192 aaPredicted RBP18.89■□□□□ 0.61
CCDC43-205ENST00000592333 RAB11FIP2Q7L804 512 aa18.89■□□□□ 0.61
CCDC43-205ENST00000592333 NDUFAF2Q8N183 169 aa18.89■□□□□ 0.61
CCDC43-205ENST00000592333 FBXO39Q8N4B4 442 aa18.89■□□□□ 0.61
CCDC43-205ENST00000592333 FAM46DQ8NEK8 389 aa18.89■□□□□ 0.61
CCDC43-205ENST00000592333 NUS1Q96E22 293 aa18.89■□□□□ 0.61
CCDC43-205ENST00000592333 NAP1L5Q96NT1 182 aaPredicted RBP18.89■□□□□ 0.61
CCDC43-205ENST00000592333 TRNAU1APQ9NX07 287 aaKnown RBP18.89■□□□□ 0.61
CCDC43-205ENST00000592333 B4GALT6Q9UBX8 382 aa18.89■□□□□ 0.61
CCDC43-205ENST00000592333 RABGEF1Q9UJ41 708 aa18.89■□□□□ 0.61
CCDC43-205ENST00000592333 HELZ2Q9BYK8 2649 aaKnown RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms