RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 APOC4-APOC2K7ER74 178 aa10.1□□□□□ -0.79
BRCA1-227ENST00000591849 CACNB4O00305 520 aaPredicted RBP10.1□□□□□ -0.79
BRCA1-227ENST00000591849 TNFSF14O43557 240 aa10.1□□□□□ -0.79
BRCA1-227ENST00000591849 HEXIM1O94992 359 aaKnown RBP10.1□□□□□ -0.79
BRCA1-227ENST00000591849 APOC2P02655 101 aa10.1□□□□□ -0.79
BRCA1-227ENST00000591849 PYGMP11217 842 aa10.1□□□□□ -0.79
BRCA1-227ENST00000591849 PECAM1P16284 738 aaPredicted RBP10.1□□□□□ -0.79
BRCA1-227ENST00000591849 JUNDP17535 347 aa10.1□□□□□ -0.79
BRCA1-227ENST00000591849 HNF1BP35680 557 aa10.1□□□□□ -0.79
BRCA1-227ENST00000591849 IGFALSP35858 605 aa10.1□□□□□ -0.79
BRCA1-227ENST00000591849 EIF3EP60228 445 aaKnown RBP10.1□□□□□ -0.79
BRCA1-227ENST00000591849 PFN3P60673 137 aa10.1□□□□□ -0.79
BRCA1-227ENST00000591849 PPARDQ03181 441 aa10.1□□□□□ -0.79
BRCA1-227ENST00000591849 NIPAL4Q0D2K0 466 aa10.1□□□□□ -0.79
BRCA1-227ENST00000591849 ZBTB17Q13105 803 aa10.1□□□□□ -0.79
BRCA1-227ENST00000591849 MTM1Q13496 603 aa10.1□□□□□ -0.79
BRCA1-227ENST00000591849 INPP5AQ14642 412 aa10.1□□□□□ -0.79
BRCA1-227ENST00000591849 PCSK7Q16549 785 aa10.1□□□□□ -0.79
BRCA1-227ENST00000591849 TAZQ16635 292 aa10.1□□□□□ -0.79
BRCA1-227ENST00000591849 ST3GAL2Q16842 350 aa10.1□□□□□ -0.79
BRCA1-227ENST00000591849 TEX44Q53QW1 395 aa10.1□□□□□ -0.79
BRCA1-227ENST00000591849 DARS2Q6PI48 645 aaKnown RBP10.1□□□□□ -0.79
BRCA1-227ENST00000591849 RD3Q7Z3Z2 195 aa10.1□□□□□ -0.79
BRCA1-227ENST00000591849 PARGQ86W56 976 aa10.1□□□□□ -0.79
BRCA1-227ENST00000591849 LRRC57Q8N9N7 239 aa10.1□□□□□ -0.79
BRCA1-227ENST00000591849 TP53I13Q8NBR0 393 aaPredicted RBP10.1□□□□□ -0.79
BRCA1-227ENST00000591849 ARRDC2Q8TBH0 407 aa10.1□□□□□ -0.79
BRCA1-227ENST00000591849 SAP25Q8TEE9 199 aa10.1□□□□□ -0.79
BRCA1-227ENST00000591849 BTN2A2Q8WVV5 523 aa10.1□□□□□ -0.79
BRCA1-227ENST00000591849 NUS1Q96E22 293 aa10.1□□□□□ -0.79
BRCA1-227ENST00000591849 CNDP2Q96KP4 475 aaKnown RBP10.1□□□□□ -0.79
BRCA1-227ENST00000591849 NSMCE3Q96MG7 304 aa10.1□□□□□ -0.79
BRCA1-227ENST00000591849 OLFM3Q96PB7 478 aa10.1□□□□□ -0.79
BRCA1-227ENST00000591849 ALS2CR12Q96Q35 445 aa10.1□□□□□ -0.79
BRCA1-227ENST00000591849 RBM15Q96T37 977 aaKnown RBP eCLIP10.1□□□□□ -0.79
BRCA1-227ENST00000591849 APOOQ9BUR5 198 aa10.1□□□□□ -0.79
BRCA1-227ENST00000591849 MLPHQ9BV36 600 aaPredicted RBP10.1□□□□□ -0.79
BRCA1-227ENST00000591849 SLC13A1Q9BZW2 595 aa10.1□□□□□ -0.79
BRCA1-227ENST00000591849 GLOD4Q9HC38 313 aa10.1□□□□□ -0.79
BRCA1-227ENST00000591849 SPASTQ9UBP0 616 aa10.1□□□□□ -0.79
BRCA1-227ENST00000591849 MOSPD1Q9UJG1 213 aa10.1□□□□□ -0.79
BRCA1-227ENST00000591849 ANGPTL2Q9UKU9 493 aa10.1□□□□□ -0.79
BRCA1-227ENST00000591849 PACSIN2Q9UNF0 486 aaPredicted RBP10.1□□□□□ -0.79
BRCA1-227ENST00000591849 DOLKQ9UPQ8 538 aa10.1□□□□□ -0.79
BRCA1-227ENST00000591849 BTBD3Q9Y2F9 522 aa10.1□□□□□ -0.79
BRCA1-227ENST00000591849 EFR3BQ9Y2G0 817 aa10.1□□□□□ -0.79
BRCA1-227ENST00000591849 ASCC3Q8N3C0 2202 aaKnown RBP10.1□□□□□ -0.79
BRCA1-227ENST00000591849 FRYQ5TBA9 3013 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 CHD5Q8TDI0 1954 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 A0A0U1RQJ8 604 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 PDE2AO00408 941 aaPredicted RBP10.09□□□□□ -0.79
BRCA1-227ENST00000591849 FFAR2O15552 330 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 PMPCBO75439 489 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 TRIM16O95361 564 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 PDHA1P08559 390 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 ALPIP09923 528 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 CTSEP14091 401 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 KELP23276 732 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 DGKAP23743 735 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 PTPN3P26045 913 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 PEX5P50542 639 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 BLKP51451 505 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 RPL26P61254 145 aaKnown RBP10.09□□□□□ -0.79
BRCA1-227ENST00000591849 SKOR1P84550 965 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 DAB2P98082 770 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 OTUD4Q01804 1114 aaKnown RBP10.09□□□□□ -0.79
BRCA1-227ENST00000591849 ADCY2Q08462 1091 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 RALGDSQ12967 914 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 ZNF211Q13398 564 aaPredicted RBP10.09□□□□□ -0.79
BRCA1-227ENST00000591849 XRCC4Q13426 336 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 FZD2Q14332 565 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 PRKD1Q15139 912 aaPredicted RBP10.09□□□□□ -0.79
BRCA1-227ENST00000591849 SHBQ15464 509 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 CNGA3Q16281 694 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 SEL1L2Q5TEA6 688 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 ALG1LQ6GMV1 187 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 ENPP7Q6UWV6 458 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 DBX2Q6ZNG2 339 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 HID1Q8IV36 788 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 CDKL3Q8IVW4 592 aaPredicted RBP10.09□□□□□ -0.79
BRCA1-227ENST00000591849 CNTD1Q8N815 330 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 TTC13Q8NBP0 860 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 CCHCR1Q8TD31 782 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 LMX1AQ8TE12 382 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 UBE2Q2Q8WVN8 375 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 PIH1D2Q8WWB5 315 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 HTR3CQ8WXA8 447 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 TEKT5Q96M29 485 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 VAT1Q99536 393 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 TDRD1Q9BXT4 1180 aaKnown RBP10.09□□□□□ -0.79
BRCA1-227ENST00000591849 SLC25A51Q9H1U9 297 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 LZTFL1Q9NQ48 299 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 EVA1BQ9NVM1 165 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 RPL26L1Q9UNX3 145 aaKnown RBP10.09□□□□□ -0.79
BRCA1-227ENST00000591849 OR1A2Q9Y585 309 aa10.09□□□□□ -0.79
BRCA1-227ENST00000591849 A0A0J9YYE9 177 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 NPIPB15A6NHN6 443 aaPredicted RBP10.08□□□□□ -0.8
BRCA1-227ENST00000591849 F5H423 210 aaPredicted RBP10.08□□□□□ -0.8
BRCA1-227ENST00000591849 PSMD11O00231 422 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 ENC1O14682 589 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms