RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 PLD2O14939 933 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 MAFKO60675 156 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 RNASEH1O60930 286 aaKnown RBP6.48□□□□□ -1.37
VPS4B-205ENST00000591383 UBOX5O94941 541 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 PIGNO95427 931 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 GSRP00390 522 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 IL1BP01584 269 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 APOC2P02655 101 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 FGGP02679 453 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 DNTTP04053 509 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 TP53P04637 393 aaPredicted RBP6.48□□□□□ -1.37
VPS4B-205ENST00000591383 HLA-DQB2P05538 268 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 ACADMP11310 421 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 GABRG2P18507 467 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 GKP32189 559 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 CD68P34810 354 aaPredicted RBP6.48□□□□□ -1.37
VPS4B-205ENST00000591383 MMP13P45452 471 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 FNTBP49356 437 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 CDKN1CP49918 316 aaPredicted RBP6.48□□□□□ -1.37
VPS4B-205ENST00000591383 EIF3EP60228 445 aaKnown RBP6.48□□□□□ -1.37
VPS4B-205ENST00000591383 MAXP61244 160 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 SNRPD1P62314 119 aaKnown RBP6.48□□□□□ -1.37
VPS4B-205ENST00000591383 ITKQ08881 620 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 SLC10A2Q12908 348 aaPredicted RBP6.48□□□□□ -1.37
VPS4B-205ENST00000591383 ELAVL3Q14576 367 aaKnown RBP6.48□□□□□ -1.37
VPS4B-205ENST00000591383 NOMO1Q15155 1222 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 TAZQ16635 292 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 TTC31Q49AM3 519 aaPredicted RBP6.48□□□□□ -1.37
VPS4B-205ENST00000591383 FAM209AQ5JX71 171 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 EXOSC6Q5RKV6 272 aaKnown RBP6.48□□□□□ -1.37
VPS4B-205ENST00000591383 CFAP58Q5T655 872 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 FAM124AQ86V42 546 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 MMAAQ8IVH4 418 aaKnown RBP6.48□□□□□ -1.37
VPS4B-205ENST00000591383 DMRTC2Q8IXT2 367 aaPredicted RBP6.48□□□□□ -1.37
VPS4B-205ENST00000591383 CCDC13Q8IYE1 715 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 OR2T3Q8NH03 318 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 ACTL9Q8TC94 416 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 TFB1MQ8WVM0 346 aaKnown RBP6.48□□□□□ -1.37
VPS4B-205ENST00000591383 PRCCQ92733 491 aaPredicted RBP6.48□□□□□ -1.37
VPS4B-205ENST00000591383 HDAC11Q96DB2 347 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 CAPZA3Q96KX2 299 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 OLFM3Q96PB7 478 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 CDC6Q99741 560 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 FERMT1Q9BQL6 677 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 FBRSQ9HAH7 460 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 PRDM16Q9HAZ2 1276 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 NT5MQ9NPB1 228 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 PRSS16Q9NQE7 514 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 DYRK4Q9NR20 520 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 HAUS2Q9NVX0 235 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 SMARCAL1Q9NZC9 954 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 CRIM1Q9NZV1 1036 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 LHX3Q9UBR4 397 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 IL36AQ9UHA7 158 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 R3HDM2Q9Y2K5 976 aaKnown RBP6.48□□□□□ -1.37
VPS4B-205ENST00000591383 JRKLQ9Y4A0 524 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 SPAG17Q6Q759 2223 aa6.48□□□□□ -1.37
VPS4B-205ENST00000591383 A0A0A0MRY4 1105 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 TRAV20A0A0B4J274 112 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 PRR23AA6NEV1 266 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 K7ESF4 209 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 PGRMC1O00264 195 aaKnown RBP6.47□□□□□ -1.37
VPS4B-205ENST00000591383 PLK4O00444 970 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 MUSKO15146 869 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 MID1O15344 667 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 DEAF1O75398 565 aaPredicted RBP6.47□□□□□ -1.37
VPS4B-205ENST00000591383 GJB3O75712 270 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 RNASEH2AO75792 299 aaKnown RBP6.47□□□□□ -1.37
VPS4B-205ENST00000591383 CD160O95971 181 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 UGT2B4P06133 528 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 NAT2P11245 290 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 RGRP47804 291 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 NR2C2P49116 596 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 METAP1P53582 386 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 COPAP53621 1224 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 SLC20A2Q08357 652 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 PPIDQ08752 370 aaKnown RBP6.47□□□□□ -1.37
VPS4B-205ENST00000591383 SLC10A7Q0GE19 358 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 ZBTB17Q13105 803 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 SNX1Q13596 522 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 ENPP2Q13822 863 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 RFTN1Q14699 578 aaPredicted RBP6.47□□□□□ -1.37
VPS4B-205ENST00000591383 PRKD1Q15139 912 aaPredicted RBP6.47□□□□□ -1.37
VPS4B-205ENST00000591383 CST6Q15828 149 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 NKG7Q16617 165 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 HS1BP3Q53T59 392 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 SLC45A4Q5BKX6 768 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 CARD16Q5EG05 197 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 LRRC73Q5JTD7 316 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 FAM182AQ5T1J6 154 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 C9orf64Q5T6V5 341 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 MARC1Q5VT66 337 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 YOD1Q5VVQ6 348 aaPredicted RBP6.47□□□□□ -1.37
VPS4B-205ENST00000591383 DARS2Q6PI48 645 aaKnown RBP6.47□□□□□ -1.37
VPS4B-205ENST00000591383 SYT10Q6XYQ8 523 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 DPY19L3Q6ZPD9 716 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 CHSY3Q70JA7 882 aa6.47□□□□□ -1.37
VPS4B-205ENST00000591383 BZW1Q7L1Q6 419 aaKnown RBP6.47□□□□□ -1.37
VPS4B-205ENST00000591383 SLC13A5Q86YT5 568 aaPredicted RBP6.47□□□□□ -1.37
VPS4B-205ENST00000591383 TMPRSS6Q8IU80 811 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms