RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 KMT2EQ8IZD2 1858 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 TBC1D3DA0A087WVF3 549 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 TBC1D3IA0A087WXS9 549 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 TBC1D3EA0A087X179 549 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 TBC1D3KA0A087X1G2 549 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 IGHV1OR15-9A0A0B4J2B8 117 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 TBC1D3FA6NER0 549 aaPredicted RBP15.21■□□□□ 0.03
ATG4D-211ENST00000589753 LRRC72A6NJI9 287 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 TBC1D3LB9A6J9 549 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 H0Y858 1186 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 PPFIA2O75334 1257 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 PCDH8O95206 1070 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 CLDN7O95471 211 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 CRTAMO95727 393 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 SEMA4FO95754 770 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 TBC1D3HP0C7X1 549 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 ZNF30P17039 623 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 LHCGRP22888 699 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 MGAT1P26572 445 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 MAGEA3P43357 314 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 CARSP49589 748 aaKnown RBP15.21■□□□□ 0.03
ATG4D-211ENST00000589753 HLTFQ14527 1009 aaKnown RBP eCLIP15.21■□□□□ 0.03
ATG4D-211ENST00000589753 POU6F1Q14863 301 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 HIF1AQ16665 826 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 CDKN3Q16667 212 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 ERCC6LQ2NKX8 1250 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 DNAJC21Q5F1R6 531 aaKnown RBP15.21■□□□□ 0.03
ATG4D-211ENST00000589753 FNBP1LQ5T0N5 605 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 LRRC66Q68CR7 880 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 DENND2CQ68D51 928 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 TBC1D3GQ6DHY5 549 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 TBC1D3CQ6IPX1 549 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 NEK5Q6P3R8 708 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 LYSMD3Q7Z3D4 306 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 GLT6D1Q7Z4J2 308 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 LONP2Q86WA8 852 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 TBC1D3Q8IZP1 549 aaPredicted RBP15.21■□□□□ 0.03
ATG4D-211ENST00000589753 OR2T34Q8NGX1 318 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 RUBCNQ92622 972 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 PWWP2AQ96N64 755 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 WRAP53Q9BUR4 548 aaKnown RBP15.21■□□□□ 0.03
ATG4D-211ENST00000589753 GPR63Q9BZJ6 419 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 IL22Q9GZX6 179 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 ZFYVE1Q9HBF4 777 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 ZDHHC18Q9NUE0 388 aa15.21■□□□□ 0.03
ATG4D-211ENST00000589753 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.21■□□□□ 0.03
ATG4D-211ENST00000589753 TTC28Q96AY4 2481 aa15.2■□□□□ 0.02
ATG4D-211ENST00000589753 A0A0U1RQS6 177 aa15.2■□□□□ 0.02
ATG4D-211ENST00000589753 PRR23AA6NEV1 266 aa15.2■□□□□ 0.02
ATG4D-211ENST00000589753 FAM47DPA6NHR8 397 aa15.2■□□□□ 0.02
ATG4D-211ENST00000589753 SDR42E2A6NKP2 422 aa15.2■□□□□ 0.02
ATG4D-211ENST00000589753 AURKAO14965 403 aa15.2■□□□□ 0.02
ATG4D-211ENST00000589753 SLC4A1P02730 911 aa15.2■□□□□ 0.02
ATG4D-211ENST00000589753 ELFN1P0C7U0 828 aa15.2■□□□□ 0.02
ATG4D-211ENST00000589753 LIG3P49916 1009 aa15.2■□□□□ 0.02
ATG4D-211ENST00000589753 NUBP1P53384 320 aa15.2■□□□□ 0.02
ATG4D-211ENST00000589753 SEPT6Q14141 434 aa15.2■□□□□ 0.02
ATG4D-211ENST00000589753 ANGPT1Q15389 498 aa15.2■□□□□ 0.02
ATG4D-211ENST00000589753 TAF1AQ15573 450 aaPredicted RBP15.2■□□□□ 0.02
ATG4D-211ENST00000589753 CNGA3Q16281 694 aa15.2■□□□□ 0.02
ATG4D-211ENST00000589753 ZNF528Q3MIS6 628 aa15.2■□□□□ 0.02
ATG4D-211ENST00000589753 PCID2Q5JVF3 399 aa15.2■□□□□ 0.02
ATG4D-211ENST00000589753 KIAA1161Q6NSJ0 714 aa15.2■□□□□ 0.02
ATG4D-211ENST00000589753 LIPIQ6XZB0 460 aa15.2■□□□□ 0.02
ATG4D-211ENST00000589753 CENPUQ71F23 418 aa15.2■□□□□ 0.02
ATG4D-211ENST00000589753 TMC3Q7Z5M5 1100 aa15.2■□□□□ 0.02
ATG4D-211ENST00000589753 FAM160A2Q8N612 972 aaPredicted RBP15.2■□□□□ 0.02
ATG4D-211ENST00000589753 FRMD1Q8N878 549 aa15.2■□□□□ 0.02
ATG4D-211ENST00000589753 PPHLN1Q8NEY8 458 aaKnown RBP15.2■□□□□ 0.02
ATG4D-211ENST00000589753 RANBP9Q96S59 729 aa15.2■□□□□ 0.02
ATG4D-211ENST00000589753 FAM126AQ9BYI3 521 aaPredicted RBP15.2■□□□□ 0.02
ATG4D-211ENST00000589753 FOXP3Q9BZS1 431 aa15.2■□□□□ 0.02
ATG4D-211ENST00000589753 SYBUQ9NX95 663 aa15.2■□□□□ 0.02
ATG4D-211ENST00000589753 MTRF1LQ9UGC7 380 aaKnown RBP15.2■□□□□ 0.02
ATG4D-211ENST00000589753 INVSQ9Y283 1065 aa15.2■□□□□ 0.02
ATG4D-211ENST00000589753 ARL5AQ9Y689 179 aa15.2■□□□□ 0.02
ATG4D-211ENST00000589753 HEATR9A2RTY3 570 aa15.19■□□□□ 0.02
ATG4D-211ENST00000589753 C2orf81A6NN90 581 aa15.19■□□□□ 0.02
ATG4D-211ENST00000589753 PSMD11O00231 422 aa15.19■□□□□ 0.02
ATG4D-211ENST00000589753 MMP20O60882 483 aa15.19■□□□□ 0.02
ATG4D-211ENST00000589753 RNGTTO60942 597 aaKnown RBP15.19■□□□□ 0.02
ATG4D-211ENST00000589753 NDUFS2O75306 463 aa15.19■□□□□ 0.02
ATG4D-211ENST00000589753 ADRA1DP25100 572 aa15.19■□□□□ 0.02
ATG4D-211ENST00000589753 ECHS1P30084 290 aa15.19■□□□□ 0.02
ATG4D-211ENST00000589753 HMGCLP35914 325 aa15.19■□□□□ 0.02
ATG4D-211ENST00000589753 RPS21P63220 83 aaKnown RBP15.19■□□□□ 0.02
ATG4D-211ENST00000589753 CRADDP78560 199 aa15.19■□□□□ 0.02
ATG4D-211ENST00000589753 PDE1BQ01064 536 aa15.19■□□□□ 0.02
ATG4D-211ENST00000589753 PTSQ03393 145 aa15.19■□□□□ 0.02
ATG4D-211ENST00000589753 DHX9Q08211 1270 aaKnown RBP15.19■□□□□ 0.02
ATG4D-211ENST00000589753 LAMB3Q13751 1172 aa15.19■□□□□ 0.02
ATG4D-211ENST00000589753 BBS9Q3SYG4 887 aa15.19■□□□□ 0.02
ATG4D-211ENST00000589753 MSS51Q4VC12 460 aa15.19■□□□□ 0.02
ATG4D-211ENST00000589753 CCDC38Q502W7 563 aa15.19■□□□□ 0.02
ATG4D-211ENST00000589753 SLC36A4Q6YBV0 504 aa15.19■□□□□ 0.02
ATG4D-211ENST00000589753 MPP5Q8N3R9 675 aa15.19■□□□□ 0.02
ATG4D-211ENST00000589753 TTC30BQ8N4P2 665 aa15.19■□□□□ 0.02
ATG4D-211ENST00000589753 SIGLEC10Q96LC7 697 aa15.19■□□□□ 0.02
ATG4D-211ENST00000589753 GPR174Q9BXC1 333 aa15.19■□□□□ 0.02
ATG4D-211ENST00000589753 SAMD15Q9P1V8 674 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms