RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 A6NCN8 305 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 LIPT2A6NK58 231 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 MYO1GB0I1T2 1018 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 NPIPB11E5RHQ5 1161 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 AP3D1O14617 1153 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 GRID2O43424 1007 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 LIASO43766 372 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 LDB3O75112 727 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 GFPT2O94808 682 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 ZNF432O94892 652 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 ACAA1P09110 424 aaPredicted RBP3.58□□□□□ -1.84
SMAD4-207ENST00000589076 CHRNB2P17787 502 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 PIP4K2AP48426 406 aaPredicted RBP3.58□□□□□ -1.84
SMAD4-207ENST00000589076 CLCN5P51795 746 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 PRAMEP78395 509 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 NIPAL4Q0D2K0 466 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 ITGADQ13349 1161 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 CAPSQ13938 189 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 FRG1Q14331 258 aaKnown RBP3.58□□□□□ -1.84
SMAD4-207ENST00000589076 CRYMQ14894 314 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 SHBQ15464 509 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 MEA1Q16626 185 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 DUSP6Q16828 381 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 IZUMO4Q1ZYL8 232 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 TCTN1Q2MV58 587 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 PRAMEF19Q5SWL8 479 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 CES5AQ6NT32 575 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 TTI2Q6NXR4 508 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 NCEH1Q6PIU2 408 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 SARM1Q6SZW1 724 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 PARM1Q6UWI2 310 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 GJC3Q8NFK1 279 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 GABPB2Q8TAK5 448 aaPredicted RBP3.58□□□□□ -1.84
SMAD4-207ENST00000589076 SCFD2Q8WU76 684 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 PSPC1Q8WXF1 523 aaKnown RBP3.58□□□□□ -1.84
SMAD4-207ENST00000589076 TMEM18Q96B42 140 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 PERPQ96FX8 193 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 ZC3HAV1LQ96H79 300 aaKnown RBP3.58□□□□□ -1.84
SMAD4-207ENST00000589076 GFM1Q96RP9 751 aaKnown RBP3.58□□□□□ -1.84
SMAD4-207ENST00000589076 SIN3AQ96ST3 1273 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 MXRA8Q9BRK3 442 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 FBRSL1Q9HCM7 1045 aaKnown RBP3.58□□□□□ -1.84
SMAD4-207ENST00000589076 HAUS2Q9NVX0 235 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 DLGAP2Q9P1A6 1054 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 CTNNAL1Q9UBT7 734 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 CORO1CQ9ULV4 474 aaPredicted RBP3.58□□□□□ -1.84
SMAD4-207ENST00000589076 GPR34Q9UPC5 381 aa3.58□□□□□ -1.84
SMAD4-207ENST00000589076 DENND3A2RUS2 1198 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 HSPB2A8KAH6 182 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 PTGES3LE9PB15 166 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 CHL1O00533 1208 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 HNRNPCL1O60812 293 aaKnown RBP3.57□□□□□ -1.84
SMAD4-207ENST00000589076 ATP2C2O75185 946 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 CLDN7O95471 211 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 MLYCDO95822 493 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 HSP90AA1P07900 732 aaKnown RBP3.57□□□□□ -1.84
SMAD4-207ENST00000589076 HOXC6P09630 235 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 TFPIP10646 304 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 EDN2P20800 178 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 AGAP20933 346 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 MYF6P23409 242 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 HOXD13P35453 343 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 PBX3P40426 434 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 PPP3CCP48454 512 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 CXCR3P49682 368 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 HDAC4P56524 1084 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 TMPRSS3P57727 454 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 FAM27E3Q08E93 113 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 CSTF3Q12996 717 aaKnown RBP3.57□□□□□ -1.84
SMAD4-207ENST00000589076 FGFBP1Q14512 234 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 ARHGEF6Q15052 776 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 MED22Q15528 200 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 HSPB2Q16082 182 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 KRT24Q2M2I5 525 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 SOWAHAQ2M3V2 549 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 TSSK4Q6SA08 328 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 CYP20A1Q6UW02 462 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 TRILQ7L0X0 811 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 PATL1Q86TB9 770 aaKnown RBP3.57□□□□□ -1.84
SMAD4-207ENST00000589076 ZNF329Q86UD4 541 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 TMPRSS12Q86WS5 348 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 ARHGAP12Q8IWW6 846 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 DHX40Q8IX18 779 aaKnown RBP3.57□□□□□ -1.84
SMAD4-207ENST00000589076 TTC39CQ8N584 583 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 ENGASEQ8NFI3 743 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 SGCDQ92629 289 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 NSUN4Q96CB9 384 aaKnown RBP3.57□□□□□ -1.84
SMAD4-207ENST00000589076 RSRC1Q96IZ7 334 aaKnown RBP3.57□□□□□ -1.84
SMAD4-207ENST00000589076 TMEM68Q96MH6 324 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 SLITRK1Q96PX8 696 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 NUF2Q9BZD4 464 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 NPFFR1Q9GZQ6 430 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 LHPPQ9H008 270 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 ISCUQ9H1K1 167 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 MAGEE1Q9HCI5 957 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 BPIFA1Q9NP55 256 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 SLC6A13Q9NSD5 602 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 VPS28Q9UK41 221 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 MKLN1Q9UL63 735 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 MTMR6Q9Y217 621 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms