RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 PRNPP04156 253 aa22.33■■□□□ 1.16
ATG4D-209ENST00000588857 ALPIP09923 528 aa22.33■■□□□ 1.16
ATG4D-209ENST00000588857 HNRNPLP14866 589 aaKnown RBP eCLIP22.33■■□□□ 1.16
ATG4D-209ENST00000588857 LPOP22079 712 aaPredicted RBP22.33■■□□□ 1.16
ATG4D-209ENST00000588857 IL12RB1P42701 662 aa22.33■■□□□ 1.16
ATG4D-209ENST00000588857 THOC5Q13769 683 aaKnown RBP22.33■■□□□ 1.16
ATG4D-209ENST00000588857 C9orf64Q5T6V5 341 aa22.33■■□□□ 1.16
ATG4D-209ENST00000588857 TXNDC11Q6PKC3 985 aa22.33■■□□□ 1.16
ATG4D-209ENST00000588857 ZSWIM9Q86XI8 627 aa22.33■■□□□ 1.16
ATG4D-209ENST00000588857 OR13J1Q8NGT2 312 aa22.33■■□□□ 1.16
ATG4D-209ENST00000588857 GABPB2Q8TAK5 448 aaPredicted RBP22.33■■□□□ 1.16
ATG4D-209ENST00000588857 SPOCK2Q92563 424 aa22.33■■□□□ 1.16
ATG4D-209ENST00000588857 GPR63Q9BZJ6 419 aa22.33■■□□□ 1.16
ATG4D-209ENST00000588857 IARS2Q9NSE4 1012 aaKnown RBP22.33■■□□□ 1.16
ATG4D-209ENST00000588857 EURLQ9NYK6 297 aa22.33■■□□□ 1.16
ATG4D-209ENST00000588857 ZNF711Q9Y462 761 aa22.33■■□□□ 1.16
ATG4D-209ENST00000588857 ATG2BQ96BY7 2078 aa22.32■■□□□ 1.16
ATG4D-209ENST00000588857 CAPN8A6NHC0 703 aa22.32■■□□□ 1.16
ATG4D-209ENST00000588857 K7EQS6 105 aa22.32■■□□□ 1.16
ATG4D-209ENST00000588857 AURKAO14965 403 aa22.32■■□□□ 1.16
ATG4D-209ENST00000588857 BUD23O43709 281 aaKnown RBP22.32■■□□□ 1.16
ATG4D-209ENST00000588857 GPR37L1O60883 481 aa22.32■■□□□ 1.16
ATG4D-209ENST00000588857 SIN3BO75182 1162 aa22.32■■□□□ 1.16
ATG4D-209ENST00000588857 EPHX1P07099 455 aa22.32■■□□□ 1.16
ATG4D-209ENST00000588857 CTSLP07711 333 aa22.32■■□□□ 1.16
ATG4D-209ENST00000588857 ARCN1P48444 511 aaKnown RBP22.32■■□□□ 1.16
ATG4D-209ENST00000588857 PRAMEP78395 509 aa22.32■■□□□ 1.16
ATG4D-209ENST00000588857 TDGQ13569 410 aa22.32■■□□□ 1.16
ATG4D-209ENST00000588857 ELAVL3Q14576 367 aaKnown RBP22.32■■□□□ 1.16
ATG4D-209ENST00000588857 LGSNQ5TDP6 509 aa22.32■■□□□ 1.16
ATG4D-209ENST00000588857 EMC10Q5UCC4 262 aa22.32■■□□□ 1.16
ATG4D-209ENST00000588857 USP45Q70EL2 814 aa22.32■■□□□ 1.16
ATG4D-209ENST00000588857 CHPFQ8IZ52 775 aa22.32■■□□□ 1.16
ATG4D-209ENST00000588857 STK40Q8N2I9 435 aa22.32■■□□□ 1.16
ATG4D-209ENST00000588857 ZNF513Q8N8E2 541 aaPredicted RBP22.32■■□□□ 1.16
ATG4D-209ENST00000588857 C11orf16Q9NQ32 467 aa22.32■■□□□ 1.16
ATG4D-209ENST00000588857 CACNA2D2Q9NY47 1150 aa22.32■■□□□ 1.16
ATG4D-209ENST00000588857 ZNF180Q9UJW8 692 aa22.32■■□□□ 1.16
ATG4D-209ENST00000588857 HCN2Q9UL51 889 aa22.32■■□□□ 1.16
ATG4D-209ENST00000588857 STON1Q9Y6Q2 735 aa22.32■■□□□ 1.16
ATG4D-209ENST00000588857 IQANK1A0A1B0GTG1 560 aa22.31■■□□□ 1.16
ATG4D-209ENST00000588857 GOLGA8TH3BQL2 631 aa22.31■■□□□ 1.16
ATG4D-209ENST00000588857 GLULP15104 373 aa22.31■■□□□ 1.16
ATG4D-209ENST00000588857 KRT15P19012 456 aa22.31■■□□□ 1.16
ATG4D-209ENST00000588857 HNF1BP35680 557 aa22.31■■□□□ 1.16
ATG4D-209ENST00000588857 ZNF140P52738 457 aaPredicted RBP22.31■■□□□ 1.16
ATG4D-209ENST00000588857 SEC13P55735 322 aa22.31■■□□□ 1.16
ATG4D-209ENST00000588857 TMPRSS15P98073 1019 aa22.31■■□□□ 1.16
ATG4D-209ENST00000588857 GRSF1Q12849 480 aaKnown RBP eCLIP22.31■■□□□ 1.16
ATG4D-209ENST00000588857 PON2Q15165 354 aa22.31■■□□□ 1.16
ATG4D-209ENST00000588857 PTPRRQ15256 657 aa22.31■■□□□ 1.16
ATG4D-209ENST00000588857 ZNF805Q5CZA5 627 aa22.31■■□□□ 1.16
ATG4D-209ENST00000588857 TEDDM1Q5T9Z0 273 aa22.31■■□□□ 1.16
ATG4D-209ENST00000588857 TAOK1Q7L7X3 1001 aa22.31■■□□□ 1.16
ATG4D-209ENST00000588857 DSG4Q86SJ6 1040 aa22.31■■□□□ 1.16
ATG4D-209ENST00000588857 OR6P1Q8NGX9 317 aa22.31■■□□□ 1.16
ATG4D-209ENST00000588857 HCAR2Q8TDS4 363 aa22.31■■□□□ 1.16
ATG4D-209ENST00000588857 EDAQ92838 391 aa22.31■■□□□ 1.16
ATG4D-209ENST00000588857 HDAC10Q969S8 669 aa22.31■■□□□ 1.16
ATG4D-209ENST00000588857 SCRN2Q96FV2 425 aa22.31■■□□□ 1.16
ATG4D-209ENST00000588857 DNAJC1Q96KC8 554 aaKnown RBP22.31■■□□□ 1.16
ATG4D-209ENST00000588857 ACOX2Q99424 681 aa22.31■■□□□ 1.16
ATG4D-209ENST00000588857 FAM167BQ9BTA0 163 aa22.31■■□□□ 1.16
ATG4D-209ENST00000588857 ZDHHC4Q9NPG8 344 aa22.31■■□□□ 1.16
ATG4D-209ENST00000588857 NLE1Q9NVX2 485 aaPredicted RBP22.31■■□□□ 1.16
ATG4D-209ENST00000588857 NSMCE4AQ9NXX6 385 aa22.31■■□□□ 1.16
ATG4D-209ENST00000588857 STX7O15400 261 aaKnown RBP22.3■■□□□ 1.16
ATG4D-209ENST00000588857 SLC7A4O43246 635 aa22.3■■□□□ 1.16
ATG4D-209ENST00000588857 UGT1A9O60656 530 aa22.3■■□□□ 1.16
ATG4D-209ENST00000588857 RPP40O75818 363 aaKnown RBP22.3■■□□□ 1.16
ATG4D-209ENST00000588857 FAM155BO75949 473 aa22.3■■□□□ 1.16
ATG4D-209ENST00000588857 SRFP11831 508 aa22.3■■□□□ 1.16
ATG4D-209ENST00000588857 NFKBIAP25963 317 aa22.3■■□□□ 1.16
ATG4D-209ENST00000588857 ARNTP27540 789 aa22.3■■□□□ 1.16
ATG4D-209ENST00000588857 SERPINB9P50453 376 aa22.3■■□□□ 1.16
ATG4D-209ENST00000588857 MAGOHP61326 146 aaKnown RBP22.3■■□□□ 1.16
ATG4D-209ENST00000588857 ACVR1Q04771 509 aa22.3■■□□□ 1.16
ATG4D-209ENST00000588857 TMEM31Q5JXX7 168 aa22.3■■□□□ 1.16
ATG4D-209ENST00000588857 CYP4X1Q8N118 509 aa22.3■■□□□ 1.16
ATG4D-209ENST00000588857 TTC30BQ8N4P2 665 aa22.3■■□□□ 1.16
ATG4D-209ENST00000588857 TMIEQ8NEW7 156 aa22.3■■□□□ 1.16
ATG4D-209ENST00000588857 OR4K2Q8NGD2 314 aa22.3■■□□□ 1.16
ATG4D-209ENST00000588857 OR13C4Q8NGS5 318 aa22.3■■□□□ 1.16
ATG4D-209ENST00000588857 TLCD1Q96CP7 247 aa22.3■■□□□ 1.16
ATG4D-209ENST00000588857 AGAP2Q99490 1192 aa22.3■■□□□ 1.16
ATG4D-209ENST00000588857 CPNE1Q99829 537 aa22.3■■□□□ 1.16
ATG4D-209ENST00000588857 UGT1A7Q9HAW7 530 aa22.3■■□□□ 1.16
ATG4D-209ENST00000588857 UGT1A10Q9HAW8 530 aa22.3■■□□□ 1.16
ATG4D-209ENST00000588857 UGT1A8Q9HAW9 530 aa22.3■■□□□ 1.16
ATG4D-209ENST00000588857 SLC17A6Q9P2U8 582 aa22.3■■□□□ 1.16
ATG4D-209ENST00000588857 DKK3Q9UBP4 350 aa22.3■■□□□ 1.16
ATG4D-209ENST00000588857 PPIL1Q9Y3C6 166 aa22.3■■□□□ 1.16
ATG4D-209ENST00000588857 PKP3Q9Y446 797 aa22.3■■□□□ 1.16
ATG4D-209ENST00000588857 C1orf232A0A0U1RR37 186 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 NARSO43776 548 aaKnown RBP22.29■■□□□ 1.16
ATG4D-209ENST00000588857 KRT37O76014 449 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 DRD1P21728 446 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 XPAP23025 273 aaPredicted RBP22.29■■□□□ 1.16
ATG4D-209ENST00000588857 TIE1P35590 1138 aa22.29■■□□□ 1.16
ATG4D-209ENST00000588857 ZXDAP98168 799 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms