RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 LRRC40Q9H9A6 602 aa19.03■□□□□ 0.64
CLPTM1-209ENST00000588855 FEZ2Q9UHY8 353 aaPredicted RBP19.03■□□□□ 0.64
CLPTM1-209ENST00000588855 EIF2B4Q9UI10 523 aaKnown RBP19.03■□□□□ 0.64
CLPTM1-209ENST00000588855 SLCO1B1Q9Y6L6 691 aa19.03■□□□□ 0.64
CLPTM1-209ENST00000588855 SCN8AQ9UQD0 1980 aa19.03■□□□□ 0.64
CLPTM1-209ENST00000588855 ESPNB1AK53 854 aa19.02■□□□□ 0.64
CLPTM1-209ENST00000588855 E7EVH7 732 aa19.02■□□□□ 0.64
CLPTM1-209ENST00000588855 HEXIM1O94992 359 aaKnown RBP19.02■□□□□ 0.64
CLPTM1-209ENST00000588855 FGF1P05230 155 aa19.02■□□□□ 0.64
CLPTM1-209ENST00000588855 BASP1P80723 227 aaKnown RBP19.02■□□□□ 0.64
CLPTM1-209ENST00000588855 GPS1Q13098 491 aa19.02■□□□□ 0.64
CLPTM1-209ENST00000588855 PPP1R7Q15435 360 aa19.02■□□□□ 0.64
CLPTM1-209ENST00000588855 LRRC66Q68CR7 880 aa19.02■□□□□ 0.64
CLPTM1-209ENST00000588855 CYP2U1Q7Z449 544 aa19.02■□□□□ 0.64
CLPTM1-209ENST00000588855 RGL4Q8IZJ4 473 aa19.02■□□□□ 0.64
CLPTM1-209ENST00000588855 DNASE2BQ8WZ79 361 aa19.02■□□□□ 0.64
CLPTM1-209ENST00000588855 RUNDC3BQ96NL0 473 aa19.02■□□□□ 0.64
CLPTM1-209ENST00000588855 LYSMD1Q96S90 227 aa19.02■□□□□ 0.64
CLPTM1-209ENST00000588855 SEMA4AQ9H3S1 761 aa19.02■□□□□ 0.64
CLPTM1-209ENST00000588855 SPO11Q9Y5K1 396 aa19.02■□□□□ 0.64
CLPTM1-209ENST00000588855 A0A1W2PPC4 97 aa19.01■□□□□ 0.63
CLPTM1-209ENST00000588855 ZNF500O60304 480 aaPredicted RBP19.01■□□□□ 0.63
CLPTM1-209ENST00000588855 TM7SF2O76062 418 aa19.01■□□□□ 0.63
CLPTM1-209ENST00000588855 EPN2O95208 641 aa19.01■□□□□ 0.63
CLPTM1-209ENST00000588855 GM2AP17900 193 aa19.01■□□□□ 0.63
CLPTM1-209ENST00000588855 LMAN1P49257 510 aa19.01■□□□□ 0.63
CLPTM1-209ENST00000588855 TERF1P54274 439 aa19.01■□□□□ 0.63
CLPTM1-209ENST00000588855 DR1Q01658 176 aa19.01■□□□□ 0.63
CLPTM1-209ENST00000588855 CREB5Q02930 508 aa19.01■□□□□ 0.63
CLPTM1-209ENST00000588855 SETMARQ53H47 684 aaPredicted RBP19.01■□□□□ 0.63
CLPTM1-209ENST00000588855 WDR45BQ5MNZ6 344 aa19.01■□□□□ 0.63
CLPTM1-209ENST00000588855 DENND2CQ68D51 928 aa19.01■□□□□ 0.63
CLPTM1-209ENST00000588855 LAIR1Q6GTX8 287 aa19.01■□□□□ 0.63
CLPTM1-209ENST00000588855 MYOCQ99972 504 aa19.01■□□□□ 0.63
CLPTM1-209ENST00000588855 C1QTNF2Q9BXJ5 285 aa19.01■□□□□ 0.63
CLPTM1-209ENST00000588855 SLC17A9Q9BYT1 436 aa19.01■□□□□ 0.63
CLPTM1-209ENST00000588855 MIR1-1HGQ9H1L0 117 aa19.01■□□□□ 0.63
CLPTM1-209ENST00000588855 FZD3Q9NPG1 666 aa19.01■□□□□ 0.63
CLPTM1-209ENST00000588855 TPX2Q9ULW0 747 aaKnown RBP19.01■□□□□ 0.63
CLPTM1-209ENST00000588855 BPTFQ12830 3046 aa19.01■□□□□ 0.63
CLPTM1-209ENST00000588855 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19■□□□□ 0.63
CLPTM1-209ENST00000588855 C1orf232A0A0U1RR37 186 aa19■□□□□ 0.63
CLPTM1-209ENST00000588855 GOLGA8CPA6NN73 597 aa19■□□□□ 0.63
CLPTM1-209ENST00000588855 ERI2A8K979 691 aaKnown RBP19■□□□□ 0.63
CLPTM1-209ENST00000588855 SLC31A1O15431 190 aa19■□□□□ 0.63
CLPTM1-209ENST00000588855 TTI1O43156 1089 aa19■□□□□ 0.63
CLPTM1-209ENST00000588855 PSMD3O43242 534 aa19■□□□□ 0.63
CLPTM1-209ENST00000588855 CLDN7O95471 211 aa19■□□□□ 0.63
CLPTM1-209ENST00000588855 PAK4O96013 591 aaPredicted RBP19■□□□□ 0.63
CLPTM1-209ENST00000588855 APRTP07741 180 aa19■□□□□ 0.63
CLPTM1-209ENST00000588855 CD27P26842 260 aa19■□□□□ 0.63
CLPTM1-209ENST00000588855 PTK6Q13882 451 aa19■□□□□ 0.63
CLPTM1-209ENST00000588855 ARHGEF7Q14155 803 aa19■□□□□ 0.63
CLPTM1-209ENST00000588855 CDKN3Q16667 212 aa19■□□□□ 0.63
CLPTM1-209ENST00000588855 NAPEPLDQ6IQ20 393 aa19■□□□□ 0.63
CLPTM1-209ENST00000588855 DENND5AQ6IQ26 1287 aa19■□□□□ 0.63
CLPTM1-209ENST00000588855 LYSMD3Q7Z3D4 306 aa19■□□□□ 0.63
CLPTM1-209ENST00000588855 HSD11B1LQ7Z5J1 315 aa19■□□□□ 0.63
CLPTM1-209ENST00000588855 JAMLQ86YT9 394 aa19■□□□□ 0.63
CLPTM1-209ENST00000588855 PIGKQ92643 395 aa19■□□□□ 0.63
CLPTM1-209ENST00000588855 LRRC45Q96CN5 670 aa19■□□□□ 0.63
CLPTM1-209ENST00000588855 LOXL4Q96JB6 756 aa19■□□□□ 0.63
CLPTM1-209ENST00000588855 TMEM74BQ9NUR3 256 aa19■□□□□ 0.63
CLPTM1-209ENST00000588855 SHOC2Q9UQ13 582 aa19■□□□□ 0.63
CLPTM1-209ENST00000588855 ZNF711Q9Y462 761 aa19■□□□□ 0.63
CLPTM1-209ENST00000588855 TP53BP1Q12888 1972 aaPredicted RBP19■□□□□ 0.63
CLPTM1-209ENST00000588855 RALGAPA1Q6GYQ0 2036 aa19■□□□□ 0.63
CLPTM1-209ENST00000588855 LZTS3O60299 673 aaPredicted RBP19■□□□□ 0.63
CLPTM1-209ENST00000588855 SUN1O94901 812 aa19■□□□□ 0.63
CLPTM1-209ENST00000588855 LMNAP02545 664 aaKnown RBP19■□□□□ 0.63
CLPTM1-209ENST00000588855 SLC4A1P02730 911 aa19■□□□□ 0.63
CLPTM1-209ENST00000588855 C1SP09871 688 aa19■□□□□ 0.63
CLPTM1-209ENST00000588855 ZNF30P17039 623 aa19■□□□□ 0.63
CLPTM1-209ENST00000588855 SGCGQ13326 291 aa19■□□□□ 0.63
CLPTM1-209ENST00000588855 TUBB2AQ13885 445 aa19■□□□□ 0.63
CLPTM1-209ENST00000588855 ZCCHC9Q8N567 271 aaKnown RBP19■□□□□ 0.63
CLPTM1-209ENST00000588855 COQ10AQ96MF6 247 aa19■□□□□ 0.63
CLPTM1-209ENST00000588855 SLC6A18Q96N87 628 aa19■□□□□ 0.63
CLPTM1-209ENST00000588855 TRIM51Q9BSJ1 452 aa19■□□□□ 0.63
CLPTM1-209ENST00000588855 TUBB2BQ9BVA1 445 aa19■□□□□ 0.63
CLPTM1-209ENST00000588855 MAGEE1Q9HCI5 957 aa19■□□□□ 0.63
CLPTM1-209ENST00000588855 PIH1D1Q9NWS0 290 aaKnown RBP19■□□□□ 0.63
CLPTM1-209ENST00000588855 PILRBQ9UKJ0 227 aa19■□□□□ 0.63
CLPTM1-209ENST00000588855 PI4KAP42356 2102 aa18.99■□□□□ 0.63
CLPTM1-209ENST00000588855 TCRBV7S3A2A0A539 114 aa18.99■□□□□ 0.63
CLPTM1-209ENST00000588855 PROB1E7EW31 1015 aa18.99■□□□□ 0.63
CLPTM1-209ENST00000588855 PSMD11O00231 422 aa18.99■□□□□ 0.63
CLPTM1-209ENST00000588855 WNT9AO14904 365 aa18.99■□□□□ 0.63
CLPTM1-209ENST00000588855 AURKAO14965 403 aa18.99■□□□□ 0.63
CLPTM1-209ENST00000588855 RAD51BO15315 384 aa18.99■□□□□ 0.63
CLPTM1-209ENST00000588855 RECQL5O94762 991 aaPredicted RBP18.99■□□□□ 0.63
CLPTM1-209ENST00000588855 HNRNPA2B1P22626 353 aaKnown RBP18.99■□□□□ 0.63
CLPTM1-209ENST00000588855 NUDT1P36639 197 aa18.99■□□□□ 0.63
CLPTM1-209ENST00000588855 GRIA1P42261 906 aa18.99■□□□□ 0.63
CLPTM1-209ENST00000588855 STC1P52823 247 aa18.99■□□□□ 0.63
CLPTM1-209ENST00000588855 MRPS25P82663 173 aaKnown RBP18.99■□□□□ 0.63
CLPTM1-209ENST00000588855 PTSQ03393 145 aa18.99■□□□□ 0.63
CLPTM1-209ENST00000588855 DHX34Q14147 1143 aaKnown RBP18.99■□□□□ 0.63
CLPTM1-209ENST00000588855 KCNJ11Q14654 390 aa18.99■□□□□ 0.63
CLPTM1-209ENST00000588855 ACOX1Q15067 660 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms