RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 HNRNPKP61978 463 aaKnown RBP eCLIP16.1■□□□□ 0.17
RETREG3-206ENST00000588423 SEMG2Q02383 582 aa16.1■□□□□ 0.17
RETREG3-206ENST00000588423 BNIP3Q12983 259 aa16.1■□□□□ 0.17
RETREG3-206ENST00000588423 NOMO1Q15155 1222 aa16.1■□□□□ 0.17
RETREG3-206ENST00000588423 LLGL1Q15334 1064 aa16.1■□□□□ 0.17
RETREG3-206ENST00000588423 CNGA3Q16281 694 aa16.1■□□□□ 0.17
RETREG3-206ENST00000588423 MACC1Q6ZN28 852 aa16.1■□□□□ 0.17
RETREG3-206ENST00000588423 GATAD2AQ86YP4 633 aa16.1■□□□□ 0.17
RETREG3-206ENST00000588423 RAVER1Q8IY67 606 aaKnown RBP16.1■□□□□ 0.17
RETREG3-206ENST00000588423 TADA1Q96BN2 335 aa16.1■□□□□ 0.17
RETREG3-206ENST00000588423 IMP4Q96G21 291 aaKnown RBP16.1■□□□□ 0.17
RETREG3-206ENST00000588423 HES6Q96HZ4 224 aa16.1■□□□□ 0.17
RETREG3-206ENST00000588423 TEKT5Q96M29 485 aa16.1■□□□□ 0.17
RETREG3-206ENST00000588423 QKIQ96PU8 341 aaKnown RBP eCLIP16.1■□□□□ 0.173e-6■■□□□ 11.6
RETREG3-206ENST00000588423 LYSMD1Q96S90 227 aa16.1■□□□□ 0.17
RETREG3-206ENST00000588423 HEMGNQ9BXL5 484 aa16.1■□□□□ 0.17
RETREG3-206ENST00000588423 SLC25A51Q9H1U9 297 aa16.1■□□□□ 0.17
RETREG3-206ENST00000588423 PCDH9Q9HC56 1237 aa16.1■□□□□ 0.17
RETREG3-206ENST00000588423 SEPT10Q9P0V9 454 aa16.1■□□□□ 0.17
RETREG3-206ENST00000588423 CHKBQ9Y259 395 aa16.1■□□□□ 0.17
RETREG3-206ENST00000588423 CAPN6Q9Y6Q1 641 aa16.1■□□□□ 0.17
RETREG3-206ENST00000588423 ASCC3Q8N3C0 2202 aaKnown RBP16.1■□□□□ 0.17
RETREG3-206ENST00000588423 DOCK9Q9BZ29 2069 aa16.09■□□□□ 0.17
RETREG3-206ENST00000588423 SPAARA0A1B0GVQ0 90 aa16.09■□□□□ 0.17
RETREG3-206ENST00000588423 CAPN8A6NHC0 703 aa16.09■□□□□ 0.17
RETREG3-206ENST00000588423 H3BM21 787 aa16.09■□□□□ 0.17
RETREG3-206ENST00000588423 DDX3YO15523 660 aaKnown RBP16.09■□□□□ 0.17
RETREG3-206ENST00000588423 TNFSF14O43557 240 aa16.09■□□□□ 0.17
RETREG3-206ENST00000588423 PIAS2O75928 621 aa16.09■□□□□ 0.17
RETREG3-206ENST00000588423 TJP3O95049 919 aa16.09■□□□□ 0.17
RETREG3-206ENST00000588423 TRIM16O95361 564 aa16.09■□□□□ 0.17
RETREG3-206ENST00000588423 CCDC175P0C221 793 aa16.09■□□□□ 0.17
RETREG3-206ENST00000588423 PYGMP11217 842 aa16.09■□□□□ 0.17
RETREG3-206ENST00000588423 NME1P15531 152 aaKnown RBP16.09■□□□□ 0.17
RETREG3-206ENST00000588423 THOP1P52888 689 aa16.09■□□□□ 0.17
RETREG3-206ENST00000588423 CCZ1BP86790 482 aa16.09■□□□□ 0.17
RETREG3-206ENST00000588423 CCZ1P86791 482 aaPredicted RBP16.09■□□□□ 0.17
RETREG3-206ENST00000588423 WASHC5Q12768 1159 aa16.09■□□□□ 0.17
RETREG3-206ENST00000588423 ARHGEF7Q14155 803 aa16.09■□□□□ 0.17
RETREG3-206ENST00000588423 INPP5AQ14642 412 aa16.09■□□□□ 0.17
RETREG3-206ENST00000588423 ESRP1Q6NXG1 681 aaKnown RBP16.09■□□□□ 0.17
RETREG3-206ENST00000588423 ZC3H18Q86VM9 953 aaKnown RBP16.09■□□□□ 0.17
RETREG3-206ENST00000588423 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.09■□□□□ 0.17
RETREG3-206ENST00000588423 BTN2A2Q8WVV5 523 aa16.09■□□□□ 0.17
RETREG3-206ENST00000588423 TBATAQ96M53 351 aa16.09■□□□□ 0.17
RETREG3-206ENST00000588423 AGAP3Q96P47 875 aa16.09■□□□□ 0.17
RETREG3-206ENST00000588423 ADGRE3Q9BY15 652 aa16.09■□□□□ 0.17
RETREG3-206ENST00000588423 GLOD4Q9HC38 313 aa16.09■□□□□ 0.17
RETREG3-206ENST00000588423 DNAJC28Q9NX36 388 aa16.09■□□□□ 0.17
RETREG3-206ENST00000588423 COL5A1P20908 1838 aaPredicted RBP16.09■□□□□ 0.17
RETREG3-206ENST00000588423 A8MX80 341 aa16.08■□□□□ 0.16
RETREG3-206ENST00000588423 ZNF189O75820 626 aaPredicted RBP16.08■□□□□ 0.16
RETREG3-206ENST00000588423 FTCDO95954 541 aa16.08■□□□□ 0.16
RETREG3-206ENST00000588423 HOXC4P09017 264 aaPredicted RBP16.08■□□□□ 0.16
RETREG3-206ENST00000588423 DGKAP23743 735 aa16.08■□□□□ 0.16
RETREG3-206ENST00000588423 HNF1BP35680 557 aa16.08■□□□□ 0.16
RETREG3-206ENST00000588423 TRIM23P36406 574 aa16.08■□□□□ 0.16
RETREG3-206ENST00000588423 SHC2P98077 582 aa16.08■□□□□ 0.16
RETREG3-206ENST00000588423 EIF2B5Q13144 721 aaKnown RBP16.08■□□□□ 0.16
RETREG3-206ENST00000588423 ACOX1Q15067 660 aa16.08■□□□□ 0.16
RETREG3-206ENST00000588423 TPRG1LQ5T0D9 272 aa16.08■□□□□ 0.16
RETREG3-206ENST00000588423 CCDC181Q5TID7 509 aa16.08■□□□□ 0.16
RETREG3-206ENST00000588423 CRTC1Q6UUV9 634 aa16.08■□□□□ 0.16
RETREG3-206ENST00000588423 B4GALNT4Q76KP1 1039 aa16.08■□□□□ 0.16
RETREG3-206ENST00000588423 HTR3CQ8WXA8 447 aa16.08■□□□□ 0.16
RETREG3-206ENST00000588423 HAUS1Q96CS2 278 aa16.08■□□□□ 0.16
RETREG3-206ENST00000588423 NUS1Q96E22 293 aa16.08■□□□□ 0.16
RETREG3-206ENST00000588423 RBM15Q96T37 977 aaKnown RBP eCLIP16.08■□□□□ 0.16
RETREG3-206ENST00000588423 HERPUD2Q9BSE4 406 aa16.08■□□□□ 0.16
RETREG3-206ENST00000588423 APOOQ9BUR5 198 aa16.08■□□□□ 0.16
RETREG3-206ENST00000588423 CEP41Q9BYV8 373 aa16.08■□□□□ 0.16
RETREG3-206ENST00000588423 FTSJ1Q9UET6 329 aa16.08■□□□□ 0.16
RETREG3-206ENST00000588423 GUCA1BQ9UMX6 200 aa16.08■□□□□ 0.16
RETREG3-206ENST00000588423 PACSIN2Q9UNF0 486 aaPredicted RBP16.08■□□□□ 0.16
RETREG3-206ENST00000588423 APOBEC2Q9Y235 224 aaKnown RBP16.08■□□□□ 0.16
RETREG3-206ENST00000588423 NEMP2A6NFY4 417 aa16.07■□□□□ 0.16
RETREG3-206ENST00000588423 DKK1O94907 266 aa16.07■□□□□ 0.16
RETREG3-206ENST00000588423 PCCBP05166 539 aa16.07■□□□□ 0.16
RETREG3-206ENST00000588423 ALPIP09923 528 aa16.07■□□□□ 0.16
RETREG3-206ENST00000588423 TSHRP16473 764 aa16.07■□□□□ 0.16
RETREG3-206ENST00000588423 CTPS1P17812 591 aa16.07■□□□□ 0.16
RETREG3-206ENST00000588423 HTR1BP28222 390 aa16.07■□□□□ 0.16
RETREG3-206ENST00000588423 TEAD1P28347 426 aa16.07■□□□□ 0.16
RETREG3-206ENST00000588423 KIAA1024LP59773 190 aa16.07■□□□□ 0.16
RETREG3-206ENST00000588423 OTUD4Q01804 1114 aaKnown RBP16.07■□□□□ 0.16
RETREG3-206ENST00000588423 NFATC4Q14934 902 aa16.07■□□□□ 0.16
RETREG3-206ENST00000588423 PNCKQ6P2M8 343 aa16.07■□□□□ 0.16
RETREG3-206ENST00000588423 KDM7AQ6ZMT4 941 aa16.07■□□□□ 0.16
RETREG3-206ENST00000588423 HSD11B1LQ7Z5J1 315 aa16.07■□□□□ 0.16
RETREG3-206ENST00000588423 TECPR1Q7Z6L1 1165 aa16.07■□□□□ 0.16
RETREG3-206ENST00000588423 TSPAN33Q86UF1 283 aa16.07■□□□□ 0.16
RETREG3-206ENST00000588423 SLC25A45Q8N413 288 aa16.07■□□□□ 0.16
RETREG3-206ENST00000588423 EID2Q8N6I1 236 aa16.07■□□□□ 0.16
RETREG3-206ENST00000588423 PLA2G15Q8NCC3 412 aa16.07■□□□□ 0.16
RETREG3-206ENST00000588423 LPCAT1Q8NF37 534 aa16.07■□□□□ 0.16
RETREG3-206ENST00000588423 ATL2Q8NHH9 583 aa16.07■□□□□ 0.16
RETREG3-206ENST00000588423 ACTL9Q8TC94 416 aa16.07■□□□□ 0.16
RETREG3-206ENST00000588423 DTD2Q96FN9 168 aa16.07■□□□□ 0.16
RETREG3-206ENST00000588423 TRIB3Q96RU7 358 aa16.07■□□□□ 0.16
RETREG3-206ENST00000588423 FERMT1Q9BQL6 677 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms