RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 SLC1A1P43005 524 aa17.74■□□□□ 0.43
TPM4-206ENST00000587201 SLC10A2Q12908 348 aaPredicted RBP17.74■□□□□ 0.43
TPM4-206ENST00000587201 CNGA3Q16281 694 aa17.74■□□□□ 0.43
TPM4-206ENST00000587201 CDKN3Q16667 212 aa17.74■□□□□ 0.43
TPM4-206ENST00000587201 ALG11Q2TAA5 492 aa17.74■□□□□ 0.43
TPM4-206ENST00000587201 ODF2Q5BJF6 829 aa17.74■□□□□ 0.43
TPM4-206ENST00000587201 FSTL5Q8N475 847 aaPredicted RBP17.74■□□□□ 0.43
TPM4-206ENST00000587201 TC2NQ8N9U0 490 aa17.74■□□□□ 0.43
TPM4-206ENST00000587201 IFI44Q8TCB0 444 aa17.74■□□□□ 0.43
TPM4-206ENST00000587201 GLMNQ92990 594 aa17.74■□□□□ 0.43
TPM4-206ENST00000587201 WDR92Q96MX6 357 aa17.74■□□□□ 0.43
TPM4-206ENST00000587201 CLPBQ9H078 707 aa17.74■□□□□ 0.43
TPM4-206ENST00000587201 DTLQ9NZJ0 730 aa17.74■□□□□ 0.43
TPM4-206ENST00000587201 NCKIPSDQ9NZQ3 722 aa17.74■□□□□ 0.43
TPM4-206ENST00000587201 CLCA2Q9UQC9 943 aa17.74■□□□□ 0.43
TPM4-206ENST00000587201 U3KQA8 63 aa17.74■□□□□ 0.43
TPM4-206ENST00000587201 CPED1A4D0V7 1026 aa17.73■□□□□ 0.43
TPM4-206ENST00000587201 LMO7DNF2Z398 122 aa17.73■□□□□ 0.43
TPM4-206ENST00000587201 YY2O15391 372 aa17.73■□□□□ 0.43
TPM4-206ENST00000587201 HEXIM1O94992 359 aaKnown RBP17.73■□□□□ 0.43
TPM4-206ENST00000587201 MT-CO3P00414 261 aa17.73■□□□□ 0.43
TPM4-206ENST00000587201 KRT1P04264 644 aa17.73■□□□□ 0.43
TPM4-206ENST00000587201 GP1BAP07359 652 aa17.73■□□□□ 0.43
TPM4-206ENST00000587201 KRT10P13645 584 aa17.73■□□□□ 0.43
TPM4-206ENST00000587201 CCNB1P14635 433 aa17.73■□□□□ 0.43
TPM4-206ENST00000587201 CTPS1P17812 591 aa17.73■□□□□ 0.43
TPM4-206ENST00000587201 CES1P23141 567 aa17.73■□□□□ 0.43
TPM4-206ENST00000587201 MAGEA1P43355 309 aa17.73■□□□□ 0.43
TPM4-206ENST00000587201 KIAA1024LP59773 190 aa17.73■□□□□ 0.43
TPM4-206ENST00000587201 SRP54P61011 504 aaKnown RBP17.73■□□□□ 0.43
TPM4-206ENST00000587201 DSC2Q02487 901 aa17.73■□□□□ 0.43
TPM4-206ENST00000587201 ARHGEF7Q14155 803 aa17.73■□□□□ 0.43
TPM4-206ENST00000587201 ELOCQ15369 112 aa17.73■□□□□ 0.43
TPM4-206ENST00000587201 NR0B2Q15466 257 aa17.73■□□□□ 0.43
TPM4-206ENST00000587201 TCEA2Q15560 299 aa17.73■□□□□ 0.43
TPM4-206ENST00000587201 ESRP1Q6NXG1 681 aaKnown RBP17.73■□□□□ 0.43
TPM4-206ENST00000587201 USP45Q70EL2 814 aa17.73■□□□□ 0.43
TPM4-206ENST00000587201 RHOT1Q8IXI2 618 aa17.73■□□□□ 0.43
TPM4-206ENST00000587201 CCDC13Q8IYE1 715 aa17.73■□□□□ 0.43
TPM4-206ENST00000587201 NDUFAF2Q8N183 169 aa17.73■□□□□ 0.43
TPM4-206ENST00000587201 PIH1D2Q8WWB5 315 aa17.73■□□□□ 0.43
TPM4-206ENST00000587201 FATE1Q969F0 183 aa17.73■□□□□ 0.43
TPM4-206ENST00000587201 FUBP1Q96AE4 644 aaKnown RBP17.73■□□□□ 0.43
TPM4-206ENST00000587201 HDAC11Q96DB2 347 aa17.73■□□□□ 0.43
TPM4-206ENST00000587201 NUS1Q96E22 293 aa17.73■□□□□ 0.43
TPM4-206ENST00000587201 SCRN2Q96FV2 425 aa17.73■□□□□ 0.43
TPM4-206ENST00000587201 COQ10AQ96MF6 247 aa17.73■□□□□ 0.43
TPM4-206ENST00000587201 ABCG4Q9H172 646 aa17.73■□□□□ 0.43
TPM4-206ENST00000587201 KCTD5Q9NXV2 234 aa17.73■□□□□ 0.43
TPM4-206ENST00000587201 AMACRQ9UHK6 382 aa17.73■□□□□ 0.43
TPM4-206ENST00000587201 HYOU1Q9Y4L1 999 aa17.73■□□□□ 0.43
TPM4-206ENST00000587201 HEY1Q9Y5J3 304 aa17.73■□□□□ 0.43
TPM4-206ENST00000587201 ZNF487B1APH4 448 aa17.72■□□□□ 0.43
TPM4-206ENST00000587201 APOL1O14791 398 aa17.72■□□□□ 0.43
TPM4-206ENST00000587201 SPOPO43791 374 aa17.72■□□□□ 0.43
TPM4-206ENST00000587201 TNFP01375 233 aa17.72■□□□□ 0.43
TPM4-206ENST00000587201 HLA-DQB2P05538 268 aa17.72■□□□□ 0.43
TPM4-206ENST00000587201 CELA2BP08218 269 aaPredicted RBP17.72■□□□□ 0.43
TPM4-206ENST00000587201 PDHA1P08559 390 aa17.72■□□□□ 0.43
TPM4-206ENST00000587201 ALPIP09923 528 aa17.72■□□□□ 0.43
TPM4-206ENST00000587201 LHCGRP22888 699 aa17.72■□□□□ 0.43
TPM4-206ENST00000587201 KELP23276 732 aa17.72■□□□□ 0.43
TPM4-206ENST00000587201 NOP2P46087 812 aaKnown RBP17.72■□□□□ 0.43
TPM4-206ENST00000587201 RPIAP49247 311 aa17.72■□□□□ 0.43
TPM4-206ENST00000587201 EPHB1P54762 984 aa17.72■□□□□ 0.43
TPM4-206ENST00000587201 TCEAL1Q15170 157 aa17.72■□□□□ 0.43
TPM4-206ENST00000587201 C6orf132Q5T0Z8 1188 aa17.72■□□□□ 0.43
TPM4-206ENST00000587201 LRRC38Q5VT99 294 aa17.72■□□□□ 0.43
TPM4-206ENST00000587201 ALG1LQ6GMV1 187 aa17.72■□□□□ 0.43
TPM4-206ENST00000587201 PNCKQ6P2M8 343 aa17.72■□□□□ 0.43
TPM4-206ENST00000587201 NYAP1Q6ZVC0 841 aa17.72■□□□□ 0.43
TPM4-206ENST00000587201 EFL1Q7Z2Z2 1120 aaKnown RBP17.72■□□□□ 0.43
TPM4-206ENST00000587201 VSIG1Q86XK7 387 aa17.72■□□□□ 0.43
TPM4-206ENST00000587201 CACTIN-AS1Q8N1I8 211 aa17.72■□□□□ 0.43
TPM4-206ENST00000587201 PLD5Q8N7P1 536 aa17.72■□□□□ 0.43
TPM4-206ENST00000587201 OR56A4Q8NGH8 313 aa17.72■□□□□ 0.43
TPM4-206ENST00000587201 TPCN2Q8NHX9 752 aa17.72■□□□□ 0.43
TPM4-206ENST00000587201 MAPK15Q8TD08 544 aa17.72■□□□□ 0.43
TPM4-206ENST00000587201 SCG3Q8WXD2 468 aaKnown RBP17.72■□□□□ 0.43
TPM4-206ENST00000587201 RNF25Q96BH1 459 aaPredicted RBP17.72■□□□□ 0.43
TPM4-206ENST00000587201 NXPE2Q96DL1 559 aa17.72■□□□□ 0.43
TPM4-206ENST00000587201 BOCQ9BWV1 1114 aa17.72■□□□□ 0.43
TPM4-206ENST00000587201 WDR26Q9H7D7 661 aa17.72■□□□□ 0.43
TPM4-206ENST00000587201 DDX56Q9NY93 547 aaKnown RBP17.72■□□□□ 0.43
TPM4-206ENST00000587201 DKK4Q9UBT3 224 aa17.72■□□□□ 0.43
TPM4-206ENST00000587201 PPIL1Q9Y3C6 166 aa17.72■□□□□ 0.43
TPM4-206ENST00000587201 EME2A4GXA9 379 aaPredicted RBP17.71■□□□□ 0.43
TPM4-206ENST00000587201 TMEM202A6NGA9 273 aa17.71■□□□□ 0.43
TPM4-206ENST00000587201 NPIPB15A6NHN6 443 aaPredicted RBP17.71■□□□□ 0.43
TPM4-206ENST00000587201 C3orf70A6NLC5 250 aaPredicted RBP17.71■□□□□ 0.43
TPM4-206ENST00000587201 PSMD11O00231 422 aa17.71■□□□□ 0.43
TPM4-206ENST00000587201 OPA1O60313 960 aa17.71■□□□□ 0.43
TPM4-206ENST00000587201 FZD6O60353 706 aa17.71■□□□□ 0.43
TPM4-206ENST00000587201 COMTP21964 271 aa17.71■□□□□ 0.43
TPM4-206ENST00000587201 CA4P22748 312 aa17.71■□□□□ 0.43
TPM4-206ENST00000587201 TRIM23P36406 574 aa17.71■□□□□ 0.43
TPM4-206ENST00000587201 ETV3P41162 512 aa17.71■□□□□ 0.43
TPM4-206ENST00000587201 PTPRRQ15256 657 aa17.71■□□□□ 0.43
TPM4-206ENST00000587201 SLC9A4Q6AI14 798 aa17.71■□□□□ 0.43
TPM4-206ENST00000587201 GUSBP11Q6P575 273 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms