RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 NEK5Q6P3R8 708 aa17■□□□□ 0.31
PRKCSH-203ENST00000586486 TSSK4Q6SA08 328 aa17■□□□□ 0.31
PRKCSH-203ENST00000586486 CRTC1Q6UUV9 634 aa17■□□□□ 0.31
PRKCSH-203ENST00000586486 WDR5BQ86VZ2 330 aa17■□□□□ 0.31
PRKCSH-203ENST00000586486 RAVER1Q8IY67 606 aaKnown RBP17■□□□□ 0.31
PRKCSH-203ENST00000586486 OR14C36Q8NHC7 312 aa17■□□□□ 0.31
PRKCSH-203ENST00000586486 BRSK1Q8TDC3 778 aa17■□□□□ 0.31
PRKCSH-203ENST00000586486 BLOC1S5Q8TDH9 187 aa17■□□□□ 0.31
PRKCSH-203ENST00000586486 GGT7Q9UJ14 662 aa17■□□□□ 0.31
PRKCSH-203ENST00000586486 C1orf232A0A0U1RR37 186 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 E7ESA3 106 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 PSMD11O00231 422 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 NEMP1O14524 444 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 AVILO75366 819 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 ATXN8OSP0DMR3 200 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 TPH1P17752 444 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 CD6P30203 668 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 ACSL1P33121 698 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 CARSP49589 748 aaKnown RBP16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 SESN2P58004 480 aaPredicted RBP16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 CSTF1Q05048 431 aaKnown RBP16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 DMWDQ09019 674 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 LAMB3Q13751 1172 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 TAF1AQ15573 450 aaPredicted RBP16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 CNGA3Q16281 694 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 ERCC6LQ2NKX8 1250 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 DNAJC21Q5F1R6 531 aaKnown RBP16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 CERCAMQ5T4B2 595 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 LRRC66Q68CR7 880 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 KIAA1161Q6NSJ0 714 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 LYSMD3Q7Z3D4 306 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 GLT6D1Q7Z4J2 308 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 TSPAN33Q86UF1 283 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 FAM124AQ86V42 546 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 LONP2Q86WA8 852 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 TTC30BQ8N4P2 665 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 OR2T34Q8NGX1 318 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 PTCD2Q8WV60 388 aaKnown RBP16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 IFT81Q8WYA0 676 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 NELL1Q92832 810 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 SPACA7Q96KW9 195 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 C19orf43Q9BQ61 176 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 ZFYVE1Q9HBF4 777 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 WSB2Q9NYS7 404 aaPredicted RBP16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 LRRK1Q38SD2 2015 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 ZNF106Q9H2Y7 1883 aaKnown RBP16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 NUMA1Q14980 2115 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 HEATR9A2RTY3 570 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 LRRC72A6NJI9 287 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 SDR42E2A6NKP2 422 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 LDB2O43679 373 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 CRTAMO95727 393 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 SEMA4FO95754 770 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 MGAT1P26572 445 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 HMGCLP35914 325 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 STC1P52823 247 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 PDE1BQ01064 536 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 ARHGEF7Q14155 803 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 HLTFQ14527 1009 aaKnown RBP eCLIP16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 POU6F1Q14863 301 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 USP39Q53GS9 565 aaKnown RBP16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 FNBP1LQ5T0N5 605 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 LIPIQ6XZB0 460 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 TMC3Q7Z5M5 1100 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 CBARPQ8N350 705 aaPredicted RBP16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 LRRC39Q96DD0 335 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 TOE1Q96GM8 510 aaKnown RBP16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 MTRF1LQ9UGC7 380 aaKnown RBP16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.99■□□□□ 0.314e-9■□□□□ 11
PRKCSH-203ENST00000586486 TCAF1Q9Y4C2 921 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 V9GYY5 206 aaPredicted RBP16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 ZNF318Q5VUA4 2279 aa16.99■□□□□ 0.31
PRKCSH-203ENST00000586486 MROH6A6NGR9 719 aa16.98■□□□□ 0.31
PRKCSH-203ENST00000586486 AURKAO14965 403 aa16.98■□□□□ 0.31
PRKCSH-203ENST00000586486 EIF3HO15372 352 aaKnown RBP eCLIP16.98■□□□□ 0.31
PRKCSH-203ENST00000586486 ELFN1P0C7U0 828 aa16.98■□□□□ 0.31
PRKCSH-203ENST00000586486 ADRA1DP25100 572 aa16.98■□□□□ 0.31
PRKCSH-203ENST00000586486 FNTBP49356 437 aa16.98■□□□□ 0.31
PRKCSH-203ENST00000586486 LIG3P49916 1009 aa16.98■□□□□ 0.31
PRKCSH-203ENST00000586486 SEMG2Q02383 582 aa16.98■□□□□ 0.31
PRKCSH-203ENST00000586486 CREB5Q02930 508 aa16.98■□□□□ 0.31
PRKCSH-203ENST00000586486 MTM1Q13496 603 aa16.98■□□□□ 0.31
PRKCSH-203ENST00000586486 MSS51Q4VC12 460 aa16.98■□□□□ 0.31
PRKCSH-203ENST00000586486 TMEM259Q4ZIN3 620 aa16.98■□□□□ 0.31
PRKCSH-203ENST00000586486 PCID2Q5JVF3 399 aa16.98■□□□□ 0.31
PRKCSH-203ENST00000586486 WDR93Q6P2C0 686 aa16.98■□□□□ 0.31
PRKCSH-203ENST00000586486 CENPUQ71F23 418 aa16.98■□□□□ 0.31
PRKCSH-203ENST00000586486 TRIM69Q86WT6 500 aa16.98■□□□□ 0.31
PRKCSH-203ENST00000586486 AGGF1Q8N302 714 aaeCLIP16.98■□□□□ 0.31
PRKCSH-203ENST00000586486 GPR161Q8N6U8 529 aaKnown RBP16.98■□□□□ 0.31
PRKCSH-203ENST00000586486 PPHLN1Q8NEY8 458 aaKnown RBP16.98■□□□□ 0.31
PRKCSH-203ENST00000586486 CXorf40AQ8TE69 158 aa16.98■□□□□ 0.31
PRKCSH-203ENST00000586486 RLN3Q8WXF3 142 aa16.98■□□□□ 0.31
PRKCSH-203ENST00000586486 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.98■□□□□ 0.31
PRKCSH-203ENST00000586486 PEX13Q92968 403 aa16.98■□□□□ 0.31
PRKCSH-203ENST00000586486 EID2BQ96D98 161 aa16.98■□□□□ 0.31
PRKCSH-203ENST00000586486 SIGLEC10Q96LC7 697 aa16.98■□□□□ 0.31
PRKCSH-203ENST00000586486 PWWP2AQ96N64 755 aa16.98■□□□□ 0.31
PRKCSH-203ENST00000586486 FMO2Q99518 471 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms