RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 FAM193AP78312 1265 aa16.2■□□□□ 0.18
ATG4D-205ENST00000586477 BASP1P80723 227 aaKnown RBP16.2■□□□□ 0.18
ATG4D-205ENST00000586477 SEMA5AQ13591 1074 aa16.2■□□□□ 0.18
ATG4D-205ENST00000586477 ST3GAL2Q16842 350 aa16.2■□□□□ 0.18
ATG4D-205ENST00000586477 ARMC12Q5T9G4 340 aa16.2■□□□□ 0.18
ATG4D-205ENST00000586477 NAPEPLDQ6IQ20 393 aa16.2■□□□□ 0.18
ATG4D-205ENST00000586477 GDPD4Q6W3E5 623 aa16.2■□□□□ 0.18
ATG4D-205ENST00000586477 CHST14Q8NCH0 376 aa16.2■□□□□ 0.18
ATG4D-205ENST00000586477 GANCQ8TET4 914 aa16.2■□□□□ 0.18
ATG4D-205ENST00000586477 SPOCK2Q92563 424 aa16.2■□□□□ 0.18
ATG4D-205ENST00000586477 VOPP1Q96AW1 172 aa16.2■□□□□ 0.18
ATG4D-205ENST00000586477 SRPK1Q96SB4 655 aaKnown RBP16.2■□□□□ 0.18
ATG4D-205ENST00000586477 OMDQ99983 421 aa16.2■□□□□ 0.18
ATG4D-205ENST00000586477 DKK3Q9UBP4 350 aa16.2■□□□□ 0.18
ATG4D-205ENST00000586477 WASF3Q9UPY6 502 aa16.2■□□□□ 0.18
ATG4D-205ENST00000586477 NCKAP1Q9Y2A7 1128 aa16.2■□□□□ 0.18
ATG4D-205ENST00000586477 NEU2Q9Y3R4 380 aa16.2■□□□□ 0.18
ATG4D-205ENST00000586477 FAM47DPA6NHR8 397 aa16.19■□□□□ 0.18
ATG4D-205ENST00000586477 LEFTY1O75610 366 aa16.19■□□□□ 0.18
ATG4D-205ENST00000586477 CEACAM1P13688 526 aa16.19■□□□□ 0.18
ATG4D-205ENST00000586477 ITGB7P26010 798 aa16.19■□□□□ 0.18
ATG4D-205ENST00000586477 CD27P26842 260 aa16.19■□□□□ 0.18
ATG4D-205ENST00000586477 RGRP47804 291 aa16.19■□□□□ 0.18
ATG4D-205ENST00000586477 PPP2CBP62714 309 aa16.19■□□□□ 0.18
ATG4D-205ENST00000586477 PPP2CAP67775 309 aa16.19■□□□□ 0.18
ATG4D-205ENST00000586477 SHC2P98077 582 aa16.19■□□□□ 0.18
ATG4D-205ENST00000586477 CNTN1Q12860 1018 aa16.19■□□□□ 0.18
ATG4D-205ENST00000586477 CALCOCO2Q13137 446 aa16.19■□□□□ 0.18
ATG4D-205ENST00000586477 POM121L1PQ3SYA9 428 aa16.19■□□□□ 0.18
ATG4D-205ENST00000586477 ZNF805Q5CZA5 627 aa16.19■□□□□ 0.18
ATG4D-205ENST00000586477 AGBL4Q5VU57 503 aa16.19■□□□□ 0.18
ATG4D-205ENST00000586477 PPP1R21Q6ZMI0 780 aa16.19■□□□□ 0.18
ATG4D-205ENST00000586477 OR2T34Q8NGX1 318 aa16.19■□□□□ 0.18
ATG4D-205ENST00000586477 PIP4K2CQ8TBX8 421 aa16.19■□□□□ 0.18
ATG4D-205ENST00000586477 GRIN3AQ8TCU5 1115 aa16.19■□□□□ 0.18
ATG4D-205ENST00000586477 TADA1Q96BN2 335 aa16.19■□□□□ 0.18
ATG4D-205ENST00000586477 SNF8Q96H20 258 aa16.19■□□□□ 0.18
ATG4D-205ENST00000586477 FEM1CQ96JP0 617 aa16.19■□□□□ 0.18
ATG4D-205ENST00000586477 CAMK1GQ96NX5 476 aa16.19■□□□□ 0.18
ATG4D-205ENST00000586477 RBM15Q96T37 977 aaKnown RBP eCLIP16.19■□□□□ 0.18
ATG4D-205ENST00000586477 ERP44Q9BS26 406 aa16.19■□□□□ 0.18
ATG4D-205ENST00000586477 TDRD1Q9BXT4 1180 aaKnown RBP16.19■□□□□ 0.18
ATG4D-205ENST00000586477 FRMD8Q9BZ67 464 aaPredicted RBP16.19■□□□□ 0.18
ATG4D-205ENST00000586477 FAM129AQ9BZQ8 928 aa16.19■□□□□ 0.18
ATG4D-205ENST00000586477 SUV39H2Q9H5I1 410 aa16.19■□□□□ 0.18
ATG4D-205ENST00000586477 FNDC3AQ9Y2H6 1198 aaKnown RBP16.19■□□□□ 0.18
ATG4D-205ENST00000586477 WASF2Q9Y6W5 498 aa16.19■□□□□ 0.18
ATG4D-205ENST00000586477 USP24Q9UPU5 2620 aa16.18■□□□□ 0.18
ATG4D-205ENST00000586477 ASPMQ8IZT6 3477 aa16.18■□□□□ 0.18
ATG4D-205ENST00000586477 A0A1W2PPC4 97 aa16.18■□□□□ 0.18
ATG4D-205ENST00000586477 EFCAB8A8MWE9 144 aa16.18■□□□□ 0.18
ATG4D-205ENST00000586477 KPNA3O00505 521 aaPredicted RBP16.18■□□□□ 0.18
ATG4D-205ENST00000586477 RAD51CO43502 376 aa16.18■□□□□ 0.18
ATG4D-205ENST00000586477 METTL18O95568 372 aa16.18■□□□□ 0.18
ATG4D-205ENST00000586477 AP2A1O95782 977 aa16.18■□□□□ 0.18
ATG4D-205ENST00000586477 WNT1P04628 370 aa16.18■□□□□ 0.18
ATG4D-205ENST00000586477 APRTP07741 180 aa16.18■□□□□ 0.18
ATG4D-205ENST00000586477 ZSCAN5DPP0CG00 497 aa16.18■□□□□ 0.18
ATG4D-205ENST00000586477 HLA-DPA1P20036 260 aa16.18■□□□□ 0.18
ATG4D-205ENST00000586477 TPSB2P20231 275 aa16.18■□□□□ 0.18
ATG4D-205ENST00000586477 XPAP23025 273 aaPredicted RBP16.18■□□□□ 0.18
ATG4D-205ENST00000586477 VPS41P49754 854 aa16.18■□□□□ 0.18
ATG4D-205ENST00000586477 EPHB1P54762 984 aa16.18■□□□□ 0.18
ATG4D-205ENST00000586477 TAS2R38P59533 333 aa16.18■□□□□ 0.18
ATG4D-205ENST00000586477 SKOR1P84550 965 aa16.18■□□□□ 0.18
ATG4D-205ENST00000586477 CDK18Q07002 472 aa16.18■□□□□ 0.18
ATG4D-205ENST00000586477 NIPAL4Q0D2K0 466 aa16.18■□□□□ 0.18
ATG4D-205ENST00000586477 TPSAB1Q15661 275 aa16.18■□□□□ 0.18
ATG4D-205ENST00000586477 KIF19Q2TAC6 998 aa16.18■□□□□ 0.18
ATG4D-205ENST00000586477 ARSIQ5FYB1 569 aa16.18■□□□□ 0.18
ATG4D-205ENST00000586477 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.18■□□□□ 0.18
ATG4D-205ENST00000586477 PRPF39Q86UA1 669 aaKnown RBP16.18■□□□□ 0.18
ATG4D-205ENST00000586477 HOOK3Q86VS8 718 aa16.18■□□□□ 0.18
ATG4D-205ENST00000586477 KLHDC8BQ8IXV7 354 aa16.18■□□□□ 0.18
ATG4D-205ENST00000586477 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.18■□□□□ 0.18
ATG4D-205ENST00000586477 OR6K2Q8NGY2 324 aa16.18■□□□□ 0.18
ATG4D-205ENST00000586477 RAB7BQ96AH8 199 aa16.18■□□□□ 0.18
ATG4D-205ENST00000586477 ARRDC3Q96B67 414 aa16.18■□□□□ 0.18
ATG4D-205ENST00000586477 SLC6A18Q96N87 628 aa16.18■□□□□ 0.18
ATG4D-205ENST00000586477 ZDHHC5Q9C0B5 715 aa16.18■□□□□ 0.18
ATG4D-205ENST00000586477 ETNK1Q9HBU6 452 aa16.18■□□□□ 0.18
ATG4D-205ENST00000586477 TPX2Q9ULW0 747 aaKnown RBP16.18■□□□□ 0.18
ATG4D-205ENST00000586477 RAI2Q9Y5P3 530 aa16.18■□□□□ 0.18
ATG4D-205ENST00000586477 SNX11Q9Y5W9 270 aa16.18■□□□□ 0.18
ATG4D-205ENST00000586477 TSPAN11A1L157 253 aa16.17■□□□□ 0.18
ATG4D-205ENST00000586477 SLC7A4O43246 635 aa16.17■□□□□ 0.18
ATG4D-205ENST00000586477 HTRA2O43464 458 aaPredicted RBP16.17■□□□□ 0.18
ATG4D-205ENST00000586477 LATO43561 262 aa16.17■□□□□ 0.18
ATG4D-205ENST00000586477 PLRG1O43660 514 aaKnown RBP16.17■□□□□ 0.18
ATG4D-205ENST00000586477 PMPCBO75439 489 aa16.17■□□□□ 0.18
ATG4D-205ENST00000586477 NDST3O95803 873 aa16.17■□□□□ 0.18
ATG4D-205ENST00000586477 TOP3BO95985 862 aaKnown RBP16.17■□□□□ 0.18
ATG4D-205ENST00000586477 UGT2B4P06133 528 aa16.17■□□□□ 0.18
ATG4D-205ENST00000586477 MMP2P08253 660 aa16.17■□□□□ 0.18
ATG4D-205ENST00000586477 ETS1P14921 441 aa16.17■□□□□ 0.18
ATG4D-205ENST00000586477 ITIH2P19823 946 aa16.17■□□□□ 0.18
ATG4D-205ENST00000586477 MAGEA6P43360 314 aa16.17■□□□□ 0.18
ATG4D-205ENST00000586477 GRIA4P48058 902 aa16.17■□□□□ 0.18
ATG4D-205ENST00000586477 CCR5P51681 352 aa16.17■□□□□ 0.18
ATG4D-205ENST00000586477 AFF3P51826 1226 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms