RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 HMOX2P30519 316 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 PEX19P40855 299 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 CCNFP41002 786 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 SKIV2L2P42285 1042 aaKnown RBP12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 MAGEA3P43357 314 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 ADGRF1Q5T601 910 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 TIFABQ6ZNK6 161 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 RIPOR1Q6ZS17 1223 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 DET1Q7L5Y6 550 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 UMODL1-AS1Q8N2C9 162 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 ING5Q8WYH8 240 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 C2orf49Q9BVC5 232 aaPredicted RBP12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 PLAC1Q9HBJ0 212 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 SYTL2Q9HCH5 934 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 EMCNQ9ULC0 261 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 PLXNA1Q9UIW2 1896 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 ZNF840PA6NDX5 716 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 UBXN8O00124 270 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 GMNNO75496 209 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 RPP40O75818 363 aaKnown RBP12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 ALDH1A2O94788 518 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 TMCC1O94876 653 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 DHRS4L1P0CG22 281 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 ATF6P18850 670 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 HTR7P34969 479 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 CSKP41240 450 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 MAPKAPK2P49137 400 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 KLF10Q13118 480 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 ARHGEF7Q14155 803 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 FLOT2Q14254 428 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 PABPC1LQ4VXU2 614 aaKnown RBP12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 GALNT4Q8N4A0 578 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 CEP70Q8NHQ1 597 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 FBXO27Q8NI29 283 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 PBXIP1Q96AQ6 731 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 NKX1-2Q9UD57 310 aaPredicted RBP12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 TIMM22Q9Y584 194 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 C8AP07357 584 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 SLC6A4P31645 630 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 PPM1FP49593 454 aaPredicted RBP12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 SMARCB1Q12824 385 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 LSM12Q3MHD2 195 aaKnown RBP12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 FUT11Q495W5 492 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 CCSAPQ6IQ19 270 aaPredicted RBP12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 ZYG11AQ6WRX3 759 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 BHLHA9Q7RTU4 235 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 LIMS2Q7Z4I7 341 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 ULK2Q8IYT8 1036 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 SLC22A17Q8WUG5 538 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 SLC7A6OSQ96CW6 309 aaPredicted RBP12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 IMP4Q96G21 291 aaKnown RBP12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 EPS15L1Q9UBC2 864 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 ZDHHC2Q9UIJ5 367 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 ZMYM5Q9UJ78 669 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 SLC8A2Q9UPR5 921 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 K7ERQ8 282 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 ANGPT2O15123 496 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 IMPG1Q17R60 797 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 C6orf10Q5SRN2 563 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 RANBP10Q6VN20 620 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 HPS6Q86YV9 775 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 HJURPQ8NCD3 748 aaPredicted RBP12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 MYEOVQ96EZ4 313 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 NPAS2Q99743 824 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 BCAP29Q9UHQ4 241 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 AURKCQ9UQB9 309 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 C15orf41Q9Y2V0 281 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 IQCF5A8MTL0 148 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 PEX11AO75192 247 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 H2AFYO75367 372 aaKnown RBP12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 UBTFL6P0CB48 400 aaPredicted RBP12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 SLC35E2BP0CK96 405 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 T-ENOLP0DO92 83 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 ITGALP20701 1170 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 FGFR3P22607 806 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 PIK3R1P27986 724 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 STXBP5Q5T5C0 1151 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 SMYD5Q6GMV2 418 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 FAM45BPQ6NSW5 357 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 PIWIL4Q7Z3Z4 852 aaKnown RBP12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 CUZD1Q86UP6 607 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 FAM45AQ8TCE6 357 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 BCL7CQ8WUZ0 217 aaPredicted RBP12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 WDR60Q8WVS4 1066 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 CCDC126Q96EE4 140 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 CDKN2AIPNLQ96HQ2 116 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 EFCAB1Q9HAE3 211 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 ASAH2Q9NR71 780 aa12.47□□□□□ -0.41
SMARCA4-208ENST00000585799 NPEPPSL1A6NEC2 478 aa12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 NEDD8-MDP1E9PL57 170 aa12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 NIPSNAP2O75323 286 aa12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 STC2O76061 302 aa12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 PSMG1O95456 288 aa12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 PIK3CGP48736 1102 aa12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 FASTKQ14296 549 aaKnown RBP12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 WASHC2DQ5SRD0 308 aa12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 CYP2R1Q6VVX0 501 aa12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 GK5Q6ZS86 529 aa12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 REM2Q8IYK8 340 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms