RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 RAD18Q9NS91 495 aa13.86□□□□□ -0.19
PRKCSH-202ENST00000585540 GOLGA6AQ9NYA3 693 aa13.86□□□□□ -0.19
PRKCSH-202ENST00000585540 KLHL8Q9P2G9 620 aaPredicted RBP13.86□□□□□ -0.19
PRKCSH-202ENST00000585540 B4GALT6Q9UBX8 382 aa13.86□□□□□ -0.19
PRKCSH-202ENST00000585540 FAM153AQ9UHL3 310 aa13.86□□□□□ -0.19
PRKCSH-202ENST00000585540 SLCO1B1Q9Y6L6 691 aa13.86□□□□□ -0.19
PRKCSH-202ENST00000585540 ADAMTS9Q9P2N4 1935 aa13.86□□□□□ -0.19
PRKCSH-202ENST00000585540 COL5A1P20908 1838 aaPredicted RBP13.85□□□□□ -0.19
PRKCSH-202ENST00000585540 ASCC3Q8N3C0 2202 aaKnown RBP13.85□□□□□ -0.19
PRKCSH-202ENST00000585540 SPTY2D1-AS1A0A0U1RR47 76 aa13.85□□□□□ -0.19
PRKCSH-202ENST00000585540 ANKRD66B4E2M5 251 aa13.85□□□□□ -0.19
PRKCSH-202ENST00000585540 H0Y8X5 98 aa13.85□□□□□ -0.19
PRKCSH-202ENST00000585540 ANXA9O76027 345 aa13.85□□□□□ -0.19
PRKCSH-202ENST00000585540 RBP3P10745 1247 aa13.85□□□□□ -0.19
PRKCSH-202ENST00000585540 TSHRP16473 764 aa13.85□□□□□ -0.19
PRKCSH-202ENST00000585540 IGFALSP35858 605 aa13.85□□□□□ -0.19
PRKCSH-202ENST00000585540 CD86P42081 329 aa13.85□□□□□ -0.19
PRKCSH-202ENST00000585540 THOP1P52888 689 aa13.85□□□□□ -0.19
PRKCSH-202ENST00000585540 EIF3EP60228 445 aaKnown RBP13.85□□□□□ -0.19
PRKCSH-202ENST00000585540 HNRNPKP61978 463 aaKnown RBP eCLIP13.85□□□□□ -0.19
PRKCSH-202ENST00000585540 SKOR1P84550 965 aa13.85□□□□□ -0.19
PRKCSH-202ENST00000585540 NIPAL4Q0D2K0 466 aa13.85□□□□□ -0.19
PRKCSH-202ENST00000585540 KLF1Q13351 362 aaPredicted RBP13.85□□□□□ -0.19
PRKCSH-202ENST00000585540 HS1BP3Q53T59 392 aa13.85□□□□□ -0.19
PRKCSH-202ENST00000585540 MACC1Q6ZN28 852 aa13.85□□□□□ -0.19
PRKCSH-202ENST00000585540 GLRX5Q86SX6 157 aa13.85□□□□□ -0.19
PRKCSH-202ENST00000585540 ZC3H18Q86VM9 953 aaKnown RBP13.85□□□□□ -0.19
PRKCSH-202ENST00000585540 NRSN1Q8IZ57 195 aa13.85□□□□□ -0.19
PRKCSH-202ENST00000585540 SDR16C5Q8N3Y7 309 aa13.85□□□□□ -0.19
PRKCSH-202ENST00000585540 OR13H1Q8NG92 308 aa13.85□□□□□ -0.19
PRKCSH-202ENST00000585540 AGAP3Q96P47 875 aa13.85□□□□□ -0.19
PRKCSH-202ENST00000585540 WRAP53Q9BUR4 548 aaKnown RBP13.85□□□□□ -0.19
PRKCSH-202ENST00000585540 HEMGNQ9BXL5 484 aa13.85□□□□□ -0.19
PRKCSH-202ENST00000585540 TRABDQ9H4I3 376 aa13.85□□□□□ -0.19
PRKCSH-202ENST00000585540 EVA1BQ9NVM1 165 aa13.85□□□□□ -0.19
PRKCSH-202ENST00000585540 SEPT10Q9P0V9 454 aa13.85□□□□□ -0.19
PRKCSH-202ENST00000585540 GGT7Q9UJ14 662 aa13.85□□□□□ -0.19
PRKCSH-202ENST00000585540 FNDC3AQ9Y2H6 1198 aaKnown RBP13.85□□□□□ -0.19
PRKCSH-202ENST00000585540 ZKSCAN5Q9Y2L8 839 aa13.85□□□□□ -0.19
PRKCSH-202ENST00000585540 RECQL5O94762 991 aaPredicted RBP13.84□□□□□ -0.19
PRKCSH-202ENST00000585540 TRIM16O95361 564 aa13.84□□□□□ -0.19
PRKCSH-202ENST00000585540 ITGAVP06756 1048 aa13.84□□□□□ -0.19
PRKCSH-202ENST00000585540 MMP2P08253 660 aa13.84□□□□□ -0.19
PRKCSH-202ENST00000585540 CDK4P11802 303 aa13.84□□□□□ -0.19
PRKCSH-202ENST00000585540 CD59P13987 128 aa13.84□□□□□ -0.19
PRKCSH-202ENST00000585540 HLA-DPA1P20036 260 aa13.84□□□□□ -0.19
PRKCSH-202ENST00000585540 STIP1P31948 543 aaKnown RBP13.84□□□□□ -0.19
PRKCSH-202ENST00000585540 GEMP55040 296 aa13.84□□□□□ -0.19
PRKCSH-202ENST00000585540 KIAA1024LP59773 190 aa13.84□□□□□ -0.19
PRKCSH-202ENST00000585540 CDK18Q07002 472 aa13.84□□□□□ -0.19
PRKCSH-202ENST00000585540 DPTQ07507 201 aa13.84□□□□□ -0.19
PRKCSH-202ENST00000585540 WASHC5Q12768 1159 aa13.84□□□□□ -0.19
PRKCSH-202ENST00000585540 PRPSAP1Q14558 356 aa13.84□□□□□ -0.19
PRKCSH-202ENST00000585540 IRF4Q15306 451 aa13.84□□□□□ -0.19
PRKCSH-202ENST00000585540 CNGA3Q16281 694 aa13.84□□□□□ -0.19
PRKCSH-202ENST00000585540 ZDHHC20Q5W0Z9 365 aa13.84□□□□□ -0.19
PRKCSH-202ENST00000585540 Q6ZSR6 202 aa13.84□□□□□ -0.19
PRKCSH-202ENST00000585540 PID1Q7Z2X4 250 aa13.84□□□□□ -0.19
PRKCSH-202ENST00000585540 NAXDQ8IW45 347 aa13.84□□□□□ -0.19
PRKCSH-202ENST00000585540 CBARPQ8N350 705 aaPredicted RBP13.84□□□□□ -0.19
PRKCSH-202ENST00000585540 CCHCR1Q8TD31 782 aa13.84□□□□□ -0.19
PRKCSH-202ENST00000585540 KLK6Q92876 244 aa13.84□□□□□ -0.19
PRKCSH-202ENST00000585540 NUS1Q96E22 293 aa13.84□□□□□ -0.19
PRKCSH-202ENST00000585540 DTD2Q96FN9 168 aa13.84□□□□□ -0.19
PRKCSH-202ENST00000585540 COQ10AQ96MF6 247 aa13.84□□□□□ -0.19
PRKCSH-202ENST00000585540 MLPHQ9BV36 600 aaPredicted RBP13.84□□□□□ -0.19
PRKCSH-202ENST00000585540 DUSP23Q9BVJ7 150 aa13.84□□□□□ -0.19
PRKCSH-202ENST00000585540 GBA3Q9H227 469 aa13.84□□□□□ -0.19
PRKCSH-202ENST00000585540 MAGEE1Q9HCI5 957 aa13.84□□□□□ -0.19
PRKCSH-202ENST00000585540 FZD3Q9NPG1 666 aa13.84□□□□□ -0.19
PRKCSH-202ENST00000585540 FSCN3Q9NQT6 498 aa13.84□□□□□ -0.19
PRKCSH-202ENST00000585540 HACD3Q9P035 362 aa13.84□□□□□ -0.19
PRKCSH-202ENST00000585540 NFKBIL1Q9UBC1 381 aaPredicted RBP13.84□□□□□ -0.19
PRKCSH-202ENST00000585540 SAE1Q9UBE0 346 aaPredicted RBP13.84□□□□□ -0.19
PRKCSH-202ENST00000585540 AAR2Q9Y312 384 aaKnown RBP13.84□□□□□ -0.19
PRKCSH-202ENST00000585540 TMEM131Q92545 1883 aa13.83□□□□□ -0.2
PRKCSH-202ENST00000585540 POM121BA6NF01 834 aa13.83□□□□□ -0.2
PRKCSH-202ENST00000585540 NEMP2A6NFY4 417 aa13.83□□□□□ -0.2
PRKCSH-202ENST00000585540 CACNB4O00305 520 aaPredicted RBP13.83□□□□□ -0.2
PRKCSH-202ENST00000585540 WNT9AO14904 365 aa13.83□□□□□ -0.2
PRKCSH-202ENST00000585540 RAD51BO15315 384 aa13.83□□□□□ -0.2
PRKCSH-202ENST00000585540 KCNK5O95279 499 aa13.83□□□□□ -0.2
PRKCSH-202ENST00000585540 NDST3O95803 873 aa13.83□□□□□ -0.2
PRKCSH-202ENST00000585540 ALPPL2P10696 532 aa13.83□□□□□ -0.2
PRKCSH-202ENST00000585540 NOVA1P51513 510 aaKnown RBP13.83□□□□□ -0.2
PRKCSH-202ENST00000585540 NFATC4Q14934 902 aa13.83□□□□□ -0.2
PRKCSH-202ENST00000585540 ACOX1Q15067 660 aa13.83□□□□□ -0.2
PRKCSH-202ENST00000585540 WSCD2Q2TBF2 565 aa13.83□□□□□ -0.2
PRKCSH-202ENST00000585540 P3H1Q32P28 736 aa13.83□□□□□ -0.2
PRKCSH-202ENST00000585540 LRRC73Q5JTD7 316 aa13.83□□□□□ -0.2
PRKCSH-202ENST00000585540 DARS2Q6PI48 645 aaKnown RBP13.83□□□□□ -0.2
PRKCSH-202ENST00000585540 B4GALNT4Q76KP1 1039 aa13.83□□□□□ -0.2
PRKCSH-202ENST00000585540 SPATS2Q86XZ4 545 aaKnown RBP13.83□□□□□ -0.2
PRKCSH-202ENST00000585540 ZNF567Q8N184 647 aa13.83□□□□□ -0.2
PRKCSH-202ENST00000585540 SLC35F6Q8N357 371 aa13.83□□□□□ -0.2
PRKCSH-202ENST00000585540 C17orf53Q8N3J3 647 aaPredicted RBP13.83□□□□□ -0.2
PRKCSH-202ENST00000585540 LPCAT1Q8NF37 534 aa13.83□□□□□ -0.2
PRKCSH-202ENST00000585540 SAP25Q8TEE9 199 aa13.83□□□□□ -0.2
PRKCSH-202ENST00000585540 NSMCE3Q96MG7 304 aa13.83□□□□□ -0.2
PRKCSH-202ENST00000585540 SPATA13Q96N96 652 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms