RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 S1PR4O95977 384 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 MOCS2O96007 188 aaPredicted RBP14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 CDKN2DP55273 166 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 PURAQ00577 322 aaKnown RBP14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 NFKB2Q00653 900 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 UGT3A2Q3SY77 523 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 GPR158Q5T848 1215 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 HMBOX1Q6NT76 420 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 LAYNQ6UX15 382 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 SCD5Q86SK9 330 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 TSPAN14Q8NG11 270 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 EZH1Q92800 747 aaPredicted RBP14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 ROPN1LQ96C74 230 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 C19orf60Q96EN9 201 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 HAUS8Q9BT25 410 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 FBRSL1Q9HCM7 1045 aaKnown RBP14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 TMCO1Q9UM00 188 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 MTF2Q9Y483 593 aaPredicted RBP14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 TRPV2Q9Y5S1 764 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 TNFRSF10BO14763 440 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 TMCC1O94876 653 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 H6PDO95479 791 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 ALDOCP09972 364 aaKnown RBP14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 CDH2P19022 906 aaPredicted RBP14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 FGFR3P22607 806 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 CD86P42081 329 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 SLC7A2P52569 658 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 MAP2K5Q13163 448 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 CYTH1Q15438 398 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 MAPRE1Q15691 268 aaKnown RBP14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 CD300LGQ6UXG3 332 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 DHFR2Q86XF0 187 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 B4GALNT2Q8NHY0 566 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 FATE1Q969F0 183 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 DNAJC1Q96KC8 554 aaKnown RBP14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 C1orf74Q96LT6 269 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 C3orf30Q96M34 536 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 CIB1Q99828 191 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 MFSD1Q9H3U5 465 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 NOL11Q9H8H0 719 aaKnown RBP14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 ZNF408Q9H9D4 720 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 NT5MQ9NPB1 228 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 THEGQ9P2T0 379 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 NUDT5Q9UKK9 219 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 DSEQ9UL01 958 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 CNOT6Q9ULM6 557 aaKnown RBP14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 CEPT1Q9Y6K0 416 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 DOCK3Q8IZD9 2030 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 NLRC5Q86WI3 1866 aa14.23□□□□□ -0.13
CDK5RAP3-237ENST00000585163 M0QZQ0 153 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 MT-CO1P00395 513 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 HSPA8P11142 646 aaKnown RBP14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 ZNF23P17027 643 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 TSPAN8P19075 237 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 GPX3P22352 226 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 MAXP61244 160 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 STX1BP61266 288 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 HERVK_113P63132 956 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 IHHQ14623 411 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 UNC50Q53HI1 259 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 FAM219BQ5XKK7 198 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 MRPL10Q7Z7H8 261 aaKnown RBP14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 LDB1Q86U70 411 aaPredicted RBP14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 UMODL1-AS1Q8N2C9 162 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 OR6P1Q8NGX9 317 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 PTPN18Q99952 460 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 SLC39A3Q9BRY0 314 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 TMEM79Q9BSE2 394 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 ERVK-6Q9BXR3 956 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 ARMC1Q9NVT9 282 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 Q9Y3F1 56 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 TANC1Q9C0D5 1861 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 BBIP1A8MTZ0 92 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 FAM155AB1AL88 458 aaPredicted RBP14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 H3BSA7 217 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 MMP2P08253 660 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 BMP2P12643 396 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 SLC5A2P31639 672 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 ARSDP51689 593 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 SLC10A7Q0GE19 358 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 FSCN1Q16658 493 aaKnown RBP14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 PIK3R6Q5UE93 754 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 MARC1Q5VT66 337 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 C9orf131Q5VYM1 1079 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 OVOS1Q6IE37 1185 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 RETREG3Q86VR2 466 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 CLYBLQ8N0X4 340 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 MYO1HQ8N1T3 1032 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 ANKFN1Q8N957 763 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 PCYOX1LQ8NBM8 494 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 OR2T34Q8NGX1 318 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 OR2T3Q8NH03 318 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 HASPINQ8TF76 798 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 HDAC10Q969S8 669 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 GPATCH1Q9BRR8 931 aaKnown RBP14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 UPF3AQ9H1J1 476 aaKnown RBP14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 NMUR1Q9HB89 426 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 SPON1Q9HCB6 807 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 OLAHQ9NV23 265 aa14.22□□□□□ -0.13
CDK5RAP3-237ENST00000585163 DDX18Q9NVP1 670 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms