RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 SERAC1Q96JX3 654 aa13.92□□□□□ -0.18
TRAF4-215ENST00000584944 FICDQ9BVA6 458 aa13.92□□□□□ -0.18
TRAF4-215ENST00000584944 SMOC1Q9H4F8 434 aa13.92□□□□□ -0.18
TRAF4-215ENST00000584944 LRRC40Q9H9A6 602 aa13.92□□□□□ -0.18
TRAF4-215ENST00000584944 DMTF1Q9Y222 760 aa13.92□□□□□ -0.18
TRAF4-215ENST00000584944 C1orf232A0A0U1RR37 186 aa13.91□□□□□ -0.18
TRAF4-215ENST00000584944 IGLON5A6NGN9 336 aa13.91□□□□□ -0.18
TRAF4-215ENST00000584944 ERI2A8K979 691 aaKnown RBP13.91□□□□□ -0.18
TRAF4-215ENST00000584944 ANKRD66B4E2M5 251 aa13.91□□□□□ -0.18
TRAF4-215ENST00000584944 EPOP01588 193 aa13.91□□□□□ -0.18
TRAF4-215ENST00000584944 KRT14P02533 472 aa13.91□□□□□ -0.18
TRAF4-215ENST00000584944 APRTP07741 180 aa13.91□□□□□ -0.18
TRAF4-215ENST00000584944 MMP2P08253 660 aa13.91□□□□□ -0.18
TRAF4-215ENST00000584944 PDHA1P08559 390 aa13.91□□□□□ -0.18
TRAF4-215ENST00000584944 HLA-DPA1P20036 260 aa13.91□□□□□ -0.18
TRAF4-215ENST00000584944 ITPKAP23677 461 aa13.91□□□□□ -0.18
TRAF4-215ENST00000584944 MMP12P39900 470 aa13.91□□□□□ -0.18
TRAF4-215ENST00000584944 VPS41P49754 854 aa13.91□□□□□ -0.18
TRAF4-215ENST00000584944 LIG3P49916 1009 aa13.91□□□□□ -0.18
TRAF4-215ENST00000584944 C21orf59P57076 290 aa13.91□□□□□ -0.18
TRAF4-215ENST00000584944 TAS2R38P59533 333 aa13.91□□□□□ -0.18
TRAF4-215ENST00000584944 TUBB2AQ13885 445 aa13.91□□□□□ -0.18
TRAF4-215ENST00000584944 TRIP13Q15645 432 aaPredicted RBP13.91□□□□□ -0.18
TRAF4-215ENST00000584944 FAM182AQ5T1J6 154 aa13.91□□□□□ -0.18
TRAF4-215ENST00000584944 FAXCQ5TGI0 409 aa13.91□□□□□ -0.18
TRAF4-215ENST00000584944 STPG1Q5TH74 334 aa13.91□□□□□ -0.18
TRAF4-215ENST00000584944 NAPEPLDQ6IQ20 393 aa13.91□□□□□ -0.18
TRAF4-215ENST00000584944 DPPA4Q7L190 304 aa13.91□□□□□ -0.18
TRAF4-215ENST00000584944 DNAAF3Q8N9W5 541 aa13.91□□□□□ -0.18
TRAF4-215ENST00000584944 MNS1Q8NEH6 495 aa13.91□□□□□ -0.18
TRAF4-215ENST00000584944 CEP76Q8TAP6 659 aa13.91□□□□□ -0.18
TRAF4-215ENST00000584944 KLK6Q92876 244 aa13.91□□□□□ -0.18
TRAF4-215ENST00000584944 RTP4Q96DX8 246 aa13.91□□□□□ -0.18
TRAF4-215ENST00000584944 SCRN2Q96FV2 425 aa13.91□□□□□ -0.18
TRAF4-215ENST00000584944 TBL1YQ9BQ87 522 aa13.91□□□□□ -0.18
TRAF4-215ENST00000584944 TUBB2BQ9BVA1 445 aa13.91□□□□□ -0.18
TRAF4-215ENST00000584944 SLC17A9Q9BYT1 436 aa13.91□□□□□ -0.18
TRAF4-215ENST00000584944 GPR63Q9BZJ6 419 aa13.91□□□□□ -0.18
TRAF4-215ENST00000584944 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.91□□□□□ -0.18
TRAF4-215ENST00000584944 B4GALT6Q9UBX8 382 aa13.91□□□□□ -0.18
TRAF4-215ENST00000584944 ASIC3Q9UHC3 531 aa13.91□□□□□ -0.18
TRAF4-215ENST00000584944 ATXN2Q99700 1313 aaKnown RBP13.9□□□□□ -0.18
TRAF4-215ENST00000584944 A0A0J9YYE9 177 aa13.9□□□□□ -0.18
TRAF4-215ENST00000584944 CAPN8A6NHC0 703 aa13.9□□□□□ -0.18
TRAF4-215ENST00000584944 PRAMEF26H0Y7S4 382 aa13.9□□□□□ -0.18
TRAF4-215ENST00000584944 AREL1O15033 823 aa13.9□□□□□ -0.18
TRAF4-215ENST00000584944 BCAT2O15382 392 aaPredicted RBP13.9□□□□□ -0.18
TRAF4-215ENST00000584944 TRBC1P01850 177 aa13.9□□□□□ -0.18
TRAF4-215ENST00000584944 FGF1P05230 155 aa13.9□□□□□ -0.18
TRAF4-215ENST00000584944 ALPIP09923 528 aa13.9□□□□□ -0.18
TRAF4-215ENST00000584944 ZNF30P17039 623 aa13.9□□□□□ -0.18
TRAF4-215ENST00000584944 MAOBP27338 520 aa13.9□□□□□ -0.18
TRAF4-215ENST00000584944 HOXD12P35452 270 aa13.9□□□□□ -0.18
TRAF4-215ENST00000584944 HNF1BP35680 557 aa13.9□□□□□ -0.18
TRAF4-215ENST00000584944 ADCY8P40145 1251 aa13.9□□□□□ -0.18
TRAF4-215ENST00000584944 AFF3P51826 1226 aaKnown RBP13.9□□□□□ -0.18
TRAF4-215ENST00000584944 PPP2CBP62714 309 aa13.9□□□□□ -0.18
TRAF4-215ENST00000584944 PPP2CAP67775 309 aa13.9□□□□□ -0.18
TRAF4-215ENST00000584944 SARNPP82979 210 aaKnown RBP13.9□□□□□ -0.18
TRAF4-215ENST00000584944 DR1Q01658 176 aa13.9□□□□□ -0.18
TRAF4-215ENST00000584944 SEMG2Q02383 582 aa13.9□□□□□ -0.18
TRAF4-215ENST00000584944 GPS1Q13098 491 aa13.9□□□□□ -0.18
TRAF4-215ENST00000584944 CYP1B1Q16678 543 aa13.9□□□□□ -0.18
TRAF4-215ENST00000584944 TMEM52BQ4KMG9 183 aa13.9□□□□□ -0.18
TRAF4-215ENST00000584944 N4BP2L1Q5TBK1 243 aaPredicted RBP13.9□□□□□ -0.18
TRAF4-215ENST00000584944 SEL1L3Q68CR1 1132 aa13.9□□□□□ -0.18
TRAF4-215ENST00000584944 ZSWIM9Q86XI8 627 aa13.9□□□□□ -0.18
TRAF4-215ENST00000584944 ZCCHC9Q8N567 271 aaKnown RBP13.9□□□□□ -0.18
TRAF4-215ENST00000584944 PIH1D2Q8WWB5 315 aa13.9□□□□□ -0.18
TRAF4-215ENST00000584944 SPOCK2Q92563 424 aa13.9□□□□□ -0.18
TRAF4-215ENST00000584944 FAM131CQ96AQ9 280 aa13.9□□□□□ -0.18
TRAF4-215ENST00000584944 OXNAD1Q96HP4 312 aaPredicted RBP13.9□□□□□ -0.18
TRAF4-215ENST00000584944 MYOCQ99972 504 aa13.9□□□□□ -0.18
TRAF4-215ENST00000584944 NUSAP1Q9BXS6 441 aaKnown RBP13.9□□□□□ -0.18
TRAF4-215ENST00000584944 DDX47Q9H0S4 455 aaKnown RBP13.9□□□□□ -0.18
TRAF4-215ENST00000584944 KCTD5Q9NXV2 234 aa13.9□□□□□ -0.18
TRAF4-215ENST00000584944 HACD3Q9P035 362 aa13.9□□□□□ -0.18
TRAF4-215ENST00000584944 GGT7Q9UJ14 662 aa13.9□□□□□ -0.18
TRAF4-215ENST00000584944 A0A1B0GTW7 788 aa13.89□□□□□ -0.19
TRAF4-215ENST00000584944 A0A1W2PPC4 97 aa13.89□□□□□ -0.19
TRAF4-215ENST00000584944 NPIPB15A6NHN6 443 aaPredicted RBP13.89□□□□□ -0.19
TRAF4-215ENST00000584944 GOLGA8CPA6NN73 597 aa13.89□□□□□ -0.19
TRAF4-215ENST00000584944 FPGTO14772 594 aa13.89□□□□□ -0.19
TRAF4-215ENST00000584944 MAGEC1O60732 1142 aa13.89□□□□□ -0.19
TRAF4-215ENST00000584944 PAK4O96013 591 aaPredicted RBP13.89□□□□□ -0.19
TRAF4-215ENST00000584944 AGTP01019 485 aa13.89□□□□□ -0.19
TRAF4-215ENST00000584944 C6P13671 934 aa13.89□□□□□ -0.19
TRAF4-215ENST00000584944 ETS1P14921 441 aa13.89□□□□□ -0.19
TRAF4-215ENST00000584944 ITIH2P19823 946 aa13.89□□□□□ -0.19
TRAF4-215ENST00000584944 KCNA4P22459 653 aa13.89□□□□□ -0.19
TRAF4-215ENST00000584944 HNRNPA2B1P22626 353 aaKnown RBP13.89□□□□□ -0.19
TRAF4-215ENST00000584944 PMLP29590 882 aa13.89□□□□□ -0.19
TRAF4-215ENST00000584944 RPL22P35268 128 aaKnown RBP13.89□□□□□ -0.19
TRAF4-215ENST00000584944 DEKP35659 375 aaKnown RBP13.89□□□□□ -0.19
TRAF4-215ENST00000584944 ATXN3P54252 364 aaPredicted RBP13.89□□□□□ -0.19
TRAF4-215ENST00000584944 TERF1P54274 439 aa13.89□□□□□ -0.19
TRAF4-215ENST00000584944 LRRC14Q15048 493 aa13.89□□□□□ -0.19
TRAF4-215ENST00000584944 SLC1A5Q15758 541 aa13.89□□□□□ -0.19
TRAF4-215ENST00000584944 WHAMMP3Q1A5X7 153 aa13.89□□□□□ -0.19
TRAF4-215ENST00000584944 SIRPB2Q5JXA9 342 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms